RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 GSE1Q14687 1217 aa17.87■□□□□ 0.45
TOP3B-213ENST00000457179 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
TOP3B-213ENST00000457179 MYBBP1AQ9BQG0 1328 aaKnown RBP17.86■□□□□ 0.45
TOP3B-213ENST00000457179 PKNOX2Q96KN3 472 aa17.86■□□□□ 0.45
TOP3B-213ENST00000457179 YEATS2Q9ULM3 1422 aa17.85■□□□□ 0.45
TOP3B-213ENST00000457179 IDI1Q13907 227 aa17.85■□□□□ 0.45
TOP3B-213ENST00000457179 ABCA9Q8IUA7 1624 aa17.85■□□□□ 0.45
TOP3B-213ENST00000457179 PDE4AP27815 886 aa17.84■□□□□ 0.45
TOP3B-213ENST00000457179 UNC13BO14795 1591 aa17.84■□□□□ 0.45
TOP3B-213ENST00000457179 KTN1Q86UP2 1357 aaKnown RBP17.84■□□□□ 0.45
TOP3B-213ENST00000457179 POGZQ7Z3K3 1410 aa17.83■□□□□ 0.44
TOP3B-213ENST00000457179 FRAT1Q92837 279 aaPredicted RBP17.83■□□□□ 0.44
TOP3B-213ENST00000457179 IQGAP3Q86VI3 1631 aa17.82■□□□□ 0.44
TOP3B-213ENST00000457179 RALBP1Q15311 655 aa17.82■□□□□ 0.44
TOP3B-213ENST00000457179 ESF1Q9H501 851 aaKnown RBP17.82■□□□□ 0.44
TOP3B-213ENST00000457179 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
TOP3B-213ENST00000457179 PER1O15534 1290 aaPredicted RBP17.81■□□□□ 0.44
TOP3B-213ENST00000457179 RIMBP3CA6NJZ7 1639 aa17.81■□□□□ 0.44
TOP3B-213ENST00000457179 RIMBP3BA6NNM3 1639 aa17.81■□□□□ 0.44
TOP3B-213ENST00000457179 RIMBP3Q9UFD9 1639 aa17.81■□□□□ 0.44
TOP3B-213ENST00000457179 NOS1P29475 1434 aa17.81■□□□□ 0.44
TOP3B-213ENST00000457179 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
TOP3B-213ENST00000457179 CDCA7LQ96GN5 454 aa17.8■□□□□ 0.44
TOP3B-213ENST00000457179 NLRP13Q86W25 1043 aa17.8■□□□□ 0.44
TOP3B-213ENST00000457179 POLR1AO95602 1720 aaPredicted RBP17.79■□□□□ 0.44
TOP3B-213ENST00000457179 E9PCH4 1651 aa17.79■□□□□ 0.44
TOP3B-213ENST00000457179 NPATQ14207 1427 aa17.79■□□□□ 0.44
TOP3B-213ENST00000457179 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
TOP3B-213ENST00000457179 NFKBIBQ15653 356 aa17.78■□□□□ 0.44
TOP3B-213ENST00000457179 SLC12A5Q9H2X9 1139 aa17.78■□□□□ 0.44
TOP3B-213ENST00000457179 PRDM15P57071 1507 aaPredicted RBP17.77■□□□□ 0.44
TOP3B-213ENST00000457179 BRD4O60885 1362 aaPredicted RBP17.76■□□□□ 0.43
TOP3B-213ENST00000457179 SKAP1Q86WV1 359 aa17.76■□□□□ 0.43
TOP3B-213ENST00000457179 EXOC6Q8TAG9 804 aa17.76■□□□□ 0.43
TOP3B-213ENST00000457179 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
TOP3B-213ENST00000457179 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
TOP3B-213ENST00000457179 TCERG1O14776 1098 aaKnown RBP17.75■□□□□ 0.43
TOP3B-213ENST00000457179 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
TOP3B-213ENST00000457179 ARAP3Q8WWN8 1544 aa17.75■□□□□ 0.43
TOP3B-213ENST00000457179 KIDINS220Q9ULH0 1771 aa17.75■□□□□ 0.43
TOP3B-213ENST00000457179 BACH2Q9BYV9 841 aa17.75■□□□□ 0.43
TOP3B-213ENST00000457179 CLTCL1P53675 1640 aa17.74■□□□□ 0.43
TOP3B-213ENST00000457179 PLIN1O60240 522 aa17.74■□□□□ 0.43
TOP3B-213ENST00000457179 CDCA8Q53HL2 280 aa17.74■□□□□ 0.43
TOP3B-213ENST00000457179 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
TOP3B-213ENST00000457179 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
TOP3B-213ENST00000457179 CABP2Q9NPB3 220 aa17.73■□□□□ 0.43
TOP3B-213ENST00000457179 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
TOP3B-213ENST00000457179 PTPRTO14522 1441 aa17.73■□□□□ 0.43
TOP3B-213ENST00000457179 INO80Q9ULG1 1556 aaPredicted RBP17.73■□□□□ 0.43
TOP3B-213ENST00000457179 CENPJQ9HC77 1338 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-213ENST00000457179 SRPK2P78362 688 aaKnown RBP17.72■□□□□ 0.43
TOP3B-213ENST00000457179 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.43
TOP3B-213ENST00000457179 MINK1Q8N4C8 1332 aaPredicted RBP17.72■□□□□ 0.43
TOP3B-213ENST00000457179 NEUROD2Q15784 382 aa17.72■□□□□ 0.43
TOP3B-213ENST00000457179 ADAMTS8Q9UP79 889 aa17.72■□□□□ 0.43
TOP3B-213ENST00000457179 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
TOP3B-213ENST00000457179 RCAN3Q9UKA8 241 aa17.71■□□□□ 0.43
TOP3B-213ENST00000457179 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
TOP3B-213ENST00000457179 POGKQ9P215 609 aa17.71■□□□□ 0.43
TOP3B-213ENST00000457179 TRPM1Q7Z4N2 1603 aa17.71■□□□□ 0.43
TOP3B-213ENST00000457179 LRPPRCP42704 1394 aaKnown RBP17.7■□□□□ 0.42
TOP3B-213ENST00000457179 TRPM2O94759 1503 aa17.7■□□□□ 0.42
TOP3B-213ENST00000457179 EIF3AQ14152 1382 aaKnown RBP17.69■□□□□ 0.42
TOP3B-213ENST00000457179 PARD3Q8TEW0 1356 aa17.69■□□□□ 0.42
TOP3B-213ENST00000457179 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
TOP3B-213ENST00000457179 SCAF11Q99590 1463 aaKnown RBP17.68■□□□□ 0.42
TOP3B-213ENST00000457179 MLH3Q9UHC1 1453 aa17.68■□□□□ 0.42
TOP3B-213ENST00000457179 COL17A1Q9UMD9 1497 aaPredicted RBP17.67■□□□□ 0.42
TOP3B-213ENST00000457179 PPP2R1AP30153 589 aa17.67■□□□□ 0.42
TOP3B-213ENST00000457179 CARD14Q9BXL6 1004 aa17.67■□□□□ 0.42
TOP3B-213ENST00000457179 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
TOP3B-213ENST00000457179 DDRGK1Q96HY6 314 aa17.67■□□□□ 0.42
TOP3B-213ENST00000457179 NUTM2FA1L443 756 aa17.66■□□□□ 0.42
TOP3B-213ENST00000457179 C14orf93Q9H972 538 aaKnown RBP17.66■□□□□ 0.42
TOP3B-213ENST00000457179 AMER1Q5JTC6 1135 aaPredicted RBP17.66■□□□□ 0.42
TOP3B-213ENST00000457179 VSIG10Q8N0Z9 540 aa17.66■□□□□ 0.42
TOP3B-213ENST00000457179 CEP152O94986 1710 aa17.65■□□□□ 0.42
TOP3B-213ENST00000457179 PRAM1Q96QH2 718 aa17.64■□□□□ 0.41
TOP3B-213ENST00000457179 SPHKAPQ2M3C7 1700 aa17.64■□□□□ 0.41
TOP3B-213ENST00000457179 PPRC1Q5VV67 1664 aaKnown RBP17.64■□□□□ 0.41
TOP3B-213ENST00000457179 HECW2Q9P2P5 1572 aa17.64■□□□□ 0.41
TOP3B-213ENST00000457179 FAM43AQ8N2R8 423 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 NEO1Q92859 1461 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 TET3O43151 1660 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 FRAT2O75474 233 aaPredicted RBP17.63■□□□□ 0.41
TOP3B-213ENST00000457179 MORC1Q86VD1 984 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 MROH1Q8NDA8 1641 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 FRMPD1Q5SYB0 1578 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 EFCAB6Q5THR3 1501 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
TOP3B-213ENST00000457179 GLIPR1L2Q4G1C9 344 aa17.62■□□□□ 0.41
TOP3B-213ENST00000457179 ABCA6Q8N139 1617 aa17.62■□□□□ 0.41
TOP3B-213ENST00000457179 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
TOP3B-213ENST00000457179 ARXQ96QS3 562 aa17.6■□□□□ 0.41
TOP3B-213ENST00000457179 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
TOP3B-213ENST00000457179 MS4A1P11836 297 aa17.6■□□□□ 0.41
TOP3B-213ENST00000457179 ZMYND15Q9H091 742 aa17.59■□□□□ 0.41
TOP3B-213ENST00000457179 RNF17Q9BXT8 1623 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms