RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 NEUROD2Q15784 382 aa20.42■□□□□ 0.86
GTF2IRD1-203ENST00000455841 POGKQ9P215 609 aa20.42■□□□□ 0.86
GTF2IRD1-203ENST00000455841 CABP2Q9NPB3 220 aa20.42■□□□□ 0.86
GTF2IRD1-203ENST00000455841 GPRASP1Q5JY77 1395 aa20.41■□□□□ 0.86
GTF2IRD1-203ENST00000455841 TRPM2O94759 1503 aa20.41■□□□□ 0.86
GTF2IRD1-203ENST00000455841 SPHKAPQ2M3C7 1700 aa20.4■□□□□ 0.86
GTF2IRD1-203ENST00000455841 EIF3AQ14152 1382 aaKnown RBP20.4■□□□□ 0.86
GTF2IRD1-203ENST00000455841 PTPRTO14522 1441 aa20.4■□□□□ 0.86
GTF2IRD1-203ENST00000455841 VGFO15240 615 aaPredicted RBP20.38■□□□□ 0.85
GTF2IRD1-203ENST00000455841 COL17A1Q9UMD9 1497 aaPredicted RBP20.38■□□□□ 0.85
GTF2IRD1-203ENST00000455841 ADAMTS8Q9UP79 889 aa20.38■□□□□ 0.85
GTF2IRD1-203ENST00000455841 SCAF11Q99590 1463 aaKnown RBP20.38■□□□□ 0.85
GTF2IRD1-203ENST00000455841 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
GTF2IRD1-203ENST00000455841 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
GTF2IRD1-203ENST00000455841 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
GTF2IRD1-203ENST00000455841 TET3O43151 1660 aa20.38■□□□□ 0.85
GTF2IRD1-203ENST00000455841 HECW2Q9P2P5 1572 aa20.37■□□□□ 0.85
GTF2IRD1-203ENST00000455841 PPRC1Q5VV67 1664 aaKnown RBP20.36■□□□□ 0.85
GTF2IRD1-203ENST00000455841 NUTM2FA1L443 756 aa20.35■□□□□ 0.85
GTF2IRD1-203ENST00000455841 PPP2R1AP30153 589 aa20.35■□□□□ 0.85
GTF2IRD1-203ENST00000455841 NUDCQ9Y266 331 aa20.35■□□□□ 0.85
GTF2IRD1-203ENST00000455841 MLH3Q9UHC1 1453 aa20.35■□□□□ 0.85
GTF2IRD1-203ENST00000455841 ABCA6Q8N139 1617 aa20.34■□□□□ 0.85
GTF2IRD1-203ENST00000455841 TSHZ2Q9NRE2 1034 aa20.34■□□□□ 0.85
GTF2IRD1-203ENST00000455841 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
GTF2IRD1-203ENST00000455841 EFCAB6Q5THR3 1501 aa20.33■□□□□ 0.85
GTF2IRD1-203ENST00000455841 CEBPAP49715 358 aaPredicted RBP20.33■□□□□ 0.85
GTF2IRD1-203ENST00000455841 MROH1Q8NDA8 1641 aa20.33■□□□□ 0.84
GTF2IRD1-203ENST00000455841 MORC1Q86VD1 984 aa20.32■□□□□ 0.84
GTF2IRD1-203ENST00000455841 PLIN1O60240 522 aa20.32■□□□□ 0.84
GTF2IRD1-203ENST00000455841 NEO1Q92859 1461 aa20.32■□□□□ 0.84
GTF2IRD1-203ENST00000455841 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
GTF2IRD1-203ENST00000455841 CARD14Q9BXL6 1004 aa20.32■□□□□ 0.84
GTF2IRD1-203ENST00000455841 FRMPD1Q5SYB0 1578 aa20.31■□□□□ 0.84
GTF2IRD1-203ENST00000455841 PPM1GO15355 546 aaPredicted RBP20.31■□□□□ 0.84
GTF2IRD1-203ENST00000455841 C14orf93Q9H972 538 aaKnown RBP20.31■□□□□ 0.84
GTF2IRD1-203ENST00000455841 PRAM1Q96QH2 718 aa20.3■□□□□ 0.84
GTF2IRD1-203ENST00000455841 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
GTF2IRD1-203ENST00000455841 MADDQ8WXG6 1647 aa20.3■□□□□ 0.84
GTF2IRD1-203ENST00000455841 POLR1AO95602 1720 aaPredicted RBP20.29■□□□□ 0.84
GTF2IRD1-203ENST00000455841 RNF17Q9BXT8 1623 aaKnown RBP20.29■□□□□ 0.84
GTF2IRD1-203ENST00000455841 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
GTF2IRD1-203ENST00000455841 PARD3Q8TEW0 1356 aa20.28■□□□□ 0.84
GTF2IRD1-203ENST00000455841 WAPLQ7Z5K2 1190 aa20.28■□□□□ 0.84
GTF2IRD1-203ENST00000455841 STAC3Q96MF2 364 aa20.28■□□□□ 0.84
GTF2IRD1-203ENST00000455841 KIF1BO60333 1816 aa20.27■□□□□ 0.84
GTF2IRD1-203ENST00000455841 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.84
GTF2IRD1-203ENST00000455841 ABCC3O15438 1527 aa20.27■□□□□ 0.84
GTF2IRD1-203ENST00000455841 DEPDC5O75140 1603 aa20.26■□□□□ 0.83
GTF2IRD1-203ENST00000455841 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
GTF2IRD1-203ENST00000455841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.25■□□□□ 0.83
GTF2IRD1-203ENST00000455841 APAF1O14727 1248 aa20.25■□□□□ 0.83
GTF2IRD1-203ENST00000455841 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
GTF2IRD1-203ENST00000455841 CFAP74Q9C0B2 1584 aa20.24■□□□□ 0.83
GTF2IRD1-203ENST00000455841 MROH2AA6NES4 1674 aa20.24■□□□□ 0.83
GTF2IRD1-203ENST00000455841 DIP2CQ9Y2E4 1556 aa20.24■□□□□ 0.83
GTF2IRD1-203ENST00000455841 PPP4R2Q9NY27 417 aa20.24■□□□□ 0.83
GTF2IRD1-203ENST00000455841 FBLN1P23142 703 aa20.22■□□□□ 0.83
GTF2IRD1-203ENST00000455841 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
GTF2IRD1-203ENST00000455841 VWDEQ8N2E2 1590 aa20.22■□□□□ 0.83
GTF2IRD1-203ENST00000455841 EVC2Q86UK5 1308 aa20.22■□□□□ 0.83
GTF2IRD1-203ENST00000455841 PLEKHG5O94827 1062 aa20.21■□□□□ 0.83
GTF2IRD1-203ENST00000455841 TXNDC2Q86VQ3 553 aa20.21■□□□□ 0.83
GTF2IRD1-203ENST00000455841 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.83
GTF2IRD1-203ENST00000455841 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
GTF2IRD1-203ENST00000455841 SOX12O15370 315 aa20.2■□□□□ 0.82
GTF2IRD1-203ENST00000455841 MAP3K4Q9Y6R4 1608 aa20.19■□□□□ 0.82
GTF2IRD1-203ENST00000455841 ERVK-7P63135 1459 aa20.17■□□□□ 0.82
GTF2IRD1-203ENST00000455841 RPGRIP1LQ68CZ1 1315 aa20.17■□□□□ 0.82
GTF2IRD1-203ENST00000455841 MTHFSP49914 203 aa20.17■□□□□ 0.82
GTF2IRD1-203ENST00000455841 EXOC6Q8TAG9 804 aa20.17■□□□□ 0.82
GTF2IRD1-203ENST00000455841 SLC26A8Q96RN1 970 aa20.16■□□□□ 0.82
GTF2IRD1-203ENST00000455841 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
GTF2IRD1-203ENST00000455841 CABP1Q9NZU7 370 aa20.14■□□□□ 0.82
GTF2IRD1-203ENST00000455841 LRPPRCP42704 1394 aaKnown RBP20.14■□□□□ 0.81
GTF2IRD1-203ENST00000455841 U2AF1L5P0DN76 240 aaPredicted RBP20.14■□□□□ 0.81
GTF2IRD1-203ENST00000455841 U2AF1Q01081 240 aaKnown RBP eCLIP20.14■□□□□ 0.81
GTF2IRD1-203ENST00000455841 DIP2BQ9P265 1576 aa20.13■□□□□ 0.81
GTF2IRD1-203ENST00000455841 PIK3C2GO75747 1445 aa20.13■□□□□ 0.81
GTF2IRD1-203ENST00000455841 CDK19Q9BWU1 502 aa20.13■□□□□ 0.81
GTF2IRD1-203ENST00000455841 SMG6Q86US8 1419 aaKnown RBP20.13■□□□□ 0.81
GTF2IRD1-203ENST00000455841 CAMSAP1Q5T5Y3 1602 aa20.12■□□□□ 0.81
GTF2IRD1-203ENST00000455841 RICTORQ6R327 1708 aa20.12■□□□□ 0.81
GTF2IRD1-203ENST00000455841 SIGLEC1Q9BZZ2 1709 aa20.11■□□□□ 0.81
GTF2IRD1-203ENST00000455841 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
GTF2IRD1-203ENST00000455841 ADGRB3O60242 1522 aa20.11■□□□□ 0.81
GTF2IRD1-203ENST00000455841 MYOM2P54296 1465 aa20.11■□□□□ 0.81
GTF2IRD1-203ENST00000455841 RBM19Q9Y4C8 960 aaKnown RBP20.1■□□□□ 0.81
GTF2IRD1-203ENST00000455841 SLC24A1O60721 1099 aa20.1■□□□□ 0.81
GTF2IRD1-203ENST00000455841 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
GTF2IRD1-203ENST00000455841 ASXL1Q8IXJ9 1541 aa20.09■□□□□ 0.81
GTF2IRD1-203ENST00000455841 IQGAP1P46940 1657 aa20.09■□□□□ 0.81
GTF2IRD1-203ENST00000455841 SYNMO15061 1565 aa20.09■□□□□ 0.81
GTF2IRD1-203ENST00000455841 SKAP1Q86WV1 359 aa20.09■□□□□ 0.81
GTF2IRD1-203ENST00000455841 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.81
GTF2IRD1-203ENST00000455841 GOLGA2Q08379 1002 aa20.07■□□□□ 0.8
GTF2IRD1-203ENST00000455841 ZMYM3Q14202 1370 aa20.07■□□□□ 0.8
GTF2IRD1-203ENST00000455841 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
GTF2IRD1-203ENST00000455841 RBM33Q96EV2 1170 aaKnown RBP20.07■□□□□ 0.8
GTF2IRD1-203ENST00000455841 CFAP53Q96M91 514 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms