RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 DSG2Q14126 1118 aa13.94□□□□□ -0.18
RFC3P1-201ENST00000454568 ABCA9Q8IUA7 1624 aa13.93□□□□□ -0.18
RFC3P1-201ENST00000454568 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
RFC3P1-201ENST00000454568 FMN1Q68DA7 1419 aa13.9□□□□□ -0.18
RFC3P1-201ENST00000454568 PHLDB1Q86UU1 1377 aa13.89□□□□□ -0.19
RFC3P1-201ENST00000454568 HRO43593 1189 aa13.89□□□□□ -0.19
RFC3P1-201ENST00000454568 PSEN2P49810 448 aa13.89□□□□□ -0.19
RFC3P1-201ENST00000454568 ADGRL1O94910 1474 aa13.88□□□□□ -0.19
RFC3P1-201ENST00000454568 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
RFC3P1-201ENST00000454568 DMRTA1Q5VZB9 504 aa13.88□□□□□ -0.19
RFC3P1-201ENST00000454568 ARAP3Q8WWN8 1544 aa13.87□□□□□ -0.19
RFC3P1-201ENST00000454568 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
RFC3P1-201ENST00000454568 CDK13Q14004 1512 aaKnown RBP13.86□□□□□ -0.19
RFC3P1-201ENST00000454568 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
RFC3P1-201ENST00000454568 NEO1Q92859 1461 aa13.86□□□□□ -0.19
RFC3P1-201ENST00000454568 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
RFC3P1-201ENST00000454568 OXER1Q8TDS5 423 aa13.84□□□□□ -0.19
RFC3P1-201ENST00000454568 KCNK17Q96T54 332 aa13.84□□□□□ -0.19
RFC3P1-201ENST00000454568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.82□□□□□ -0.2
RFC3P1-201ENST00000454568 KCTD12Q96CX2 325 aaKnown RBP13.81□□□□□ -0.2
RFC3P1-201ENST00000454568 AKNAQ7Z591 1439 aa13.81□□□□□ -0.2
RFC3P1-201ENST00000454568 FANCAO15360 1455 aa13.8□□□□□ -0.2
RFC3P1-201ENST00000454568 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
RFC3P1-201ENST00000454568 TTC37Q6PGP7 1564 aa13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 ZNF454Q8N9F8 522 aa13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 DENND4BO75064 1496 aaPredicted RBP13.79□□□□□ -0.2
RFC3P1-201ENST00000454568 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
RFC3P1-201ENST00000454568 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
RFC3P1-201ENST00000454568 PDE4AP27815 886 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 CLIP1P30622 1438 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 BCL2L12Q9HB09 334 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 VPS9D1Q9Y2B5 631 aa13.77□□□□□ -0.21
RFC3P1-201ENST00000454568 NKX1-1Q15270 411 aaPredicted RBP13.76□□□□□ -0.21
RFC3P1-201ENST00000454568 EFCAB2Q5VUJ9 269 aa13.76□□□□□ -0.21
RFC3P1-201ENST00000454568 PLCH2O75038 1416 aa13.75□□□□□ -0.21
RFC3P1-201ENST00000454568 KIF14Q15058 1648 aa13.75□□□□□ -0.21
RFC3P1-201ENST00000454568 TROQ12816 1431 aaPredicted RBP13.74□□□□□ -0.21
RFC3P1-201ENST00000454568 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
RFC3P1-201ENST00000454568 MYO5CQ9NQX4 1742 aa13.74□□□□□ -0.21
RFC3P1-201ENST00000454568 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 PTPREP23469 700 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 PCF11O94913 1555 aaKnown RBP13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 FRMPD1Q5SYB0 1578 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 CCDC18Q5T9S5 1454 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 LRRIQ1Q96JM4 1722 aa13.73□□□□□ -0.21
RFC3P1-201ENST00000454568 RICTORQ6R327 1708 aa13.72□□□□□ -0.21
RFC3P1-201ENST00000454568 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
RFC3P1-201ENST00000454568 FOSBP53539 338 aa13.7□□□□□ -0.22
RFC3P1-201ENST00000454568 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
RFC3P1-201ENST00000454568 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
RFC3P1-201ENST00000454568 GOLGA8CPA6NN73 597 aa13.67□□□□□ -0.22
RFC3P1-201ENST00000454568 ZFYVE16Q7Z3T8 1539 aa13.67□□□□□ -0.22
RFC3P1-201ENST00000454568 ARHGEF40Q8TER5 1519 aa13.67□□□□□ -0.22
RFC3P1-201ENST00000454568 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 YEATS2Q9ULM3 1422 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 ZMYM4Q5VZL5 1548 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 MLECQ14165 292 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
RFC3P1-201ENST00000454568 NCKAP5LQ9HCH0 1330 aa13.65□□□□□ -0.22
RFC3P1-201ENST00000454568 PTPN5P54829 565 aa13.65□□□□□ -0.22
RFC3P1-201ENST00000454568 ZNF777Q9ULD5 760 aaPredicted RBP13.65□□□□□ -0.22
RFC3P1-201ENST00000454568 ADAMTSL3P82987 1691 aa13.65□□□□□ -0.22
RFC3P1-201ENST00000454568 HECW2Q9P2P5 1572 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 PTPRMP28827 1452 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 EVI5O60447 810 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 ZDHHC16Q969W1 377 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 DDX27Q96GQ7 796 aaKnown RBP13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 CDC42BPBQ9Y5S2 1711 aa13.64□□□□□ -0.23
RFC3P1-201ENST00000454568 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
RFC3P1-201ENST00000454568 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
RFC3P1-201ENST00000454568 MADDQ8WXG6 1647 aa13.63□□□□□ -0.23
RFC3P1-201ENST00000454568 ZNF518AQ6AHZ1 1483 aa13.62□□□□□ -0.23
RFC3P1-201ENST00000454568 ZBED2Q9BTP6 218 aa13.62□□□□□ -0.23
RFC3P1-201ENST00000454568 CEP162Q5TB80 1403 aa13.62□□□□□ -0.23
RFC3P1-201ENST00000454568 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 THSD4Q6ZMP0 1018 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 LARP6Q9BRS8 491 aaKnown RBP13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 ATP10AO60312 1499 aa13.61□□□□□ -0.23
RFC3P1-201ENST00000454568 RIMS1Q86UR5 1692 aaKnown RBP13.6□□□□□ -0.23
RFC3P1-201ENST00000454568 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
RFC3P1-201ENST00000454568 RGS20O76081 388 aa13.6□□□□□ -0.23
RFC3P1-201ENST00000454568 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
RFC3P1-201ENST00000454568 WNT2BQ93097 391 aa13.59□□□□□ -0.23
RFC3P1-201ENST00000454568 C9orf84Q5VXU9 1444 aa13.58□□□□□ -0.24
RFC3P1-201ENST00000454568 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
RFC3P1-201ENST00000454568 CCNB3Q8WWL7 1395 aa13.58□□□□□ -0.24
RFC3P1-201ENST00000454568 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
RFC3P1-201ENST00000454568 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
RFC3P1-201ENST00000454568 SIGLEC1Q9BZZ2 1709 aa13.56□□□□□ -0.24
RFC3P1-201ENST00000454568 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
RFC3P1-201ENST00000454568 ABCC1P33527 1531 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms