RNA–Protein interactions for RNA: ENST00000454129.5

HCG18-239, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 4,433 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-239ENST00000454129 FOXD4L5Q5VV16 416 aaPredicted RBP8.16□□□□□ -1.1
HCG18-239ENST00000454129 FOXD4L4Q8WXT5 416 aaPredicted RBP8.16□□□□□ -1.1
HCG18-239ENST00000454129 KIF7Q2M1P5 1343 aa8.16□□□□□ -1.1
HCG18-239ENST00000454129 EVA1CP58658 441 aa8.16□□□□□ -1.1
HCG18-239ENST00000454129 NECTIN2Q92692 538 aa8.16□□□□□ -1.1
HCG18-239ENST00000454129 TMEM132EQ6IEE7 984 aa8.15□□□□□ -1.1
HCG18-239ENST00000454129 GOLGA6L3A6NEY3 463 aa8.15□□□□□ -1.1
HCG18-239ENST00000454129 PSME1Q06323 249 aa8.15□□□□□ -1.1
HCG18-239ENST00000454129 GGNBP2Q9H3C7 697 aa8.15□□□□□ -1.11
HCG18-239ENST00000454129 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.15□□□□□ -1.11
HCG18-239ENST00000454129 KIF16BQ96L93 1317 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 G3V3G9 751 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 DCAF8Q5TAQ9 597 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 STAC3Q96MF2 364 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 C9orf78Q9NZ63 289 aaPredicted RBP8.14□□□□□ -1.11
HCG18-239ENST00000454129 NEXNQ0ZGT2 675 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 DZIP1LQ8IYY4 767 aaKnown RBP8.14□□□□□ -1.11
HCG18-239ENST00000454129 CCDC34Q96HJ3 373 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 DDX19BQ9UMR2 479 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 ANKRD50Q9ULJ7 1429 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 CCDC7Q96M83 1385 aa8.14□□□□□ -1.11
HCG18-239ENST00000454129 TTC5Q8N0Z6 440 aa8.13□□□□□ -1.11
HCG18-239ENST00000454129 HMOX1P09601 288 aa8.13□□□□□ -1.11
HCG18-239ENST00000454129 RUNDC1Q96C34 613 aa8.13□□□□□ -1.11
HCG18-239ENST00000454129 SF3A1Q15459 793 aaKnown RBP8.13□□□□□ -1.11
HCG18-239ENST00000454129 AMER1Q5JTC6 1135 aaPredicted RBP8.13□□□□□ -1.11
HCG18-239ENST00000454129 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
HCG18-239ENST00000454129 RASSF8Q8NHQ8 419 aa8.13□□□□□ -1.11
HCG18-239ENST00000454129 API5Q9BZZ5 524 aaKnown RBP8.13□□□□□ -1.11
HCG18-239ENST00000454129 KIF3AQ9Y496 699 aa8.13□□□□□ -1.11
HCG18-239ENST00000454129 FKBP5Q13451 457 aaPredicted RBP8.13□□□□□ -1.11
HCG18-239ENST00000454129 FOXD4L6Q3SYB3 417 aaPredicted RBP8.13□□□□□ -1.11
HCG18-239ENST00000454129 CFAP70Q5T0N1 1121 aa8.13□□□□□ -1.11
HCG18-239ENST00000454129 FOXD4L3Q6VB84 417 aaPredicted RBP8.13□□□□□ -1.11
HCG18-239ENST00000454129 KDM5BQ9UGL1 1544 aa8.12□□□□□ -1.11
HCG18-239ENST00000454129 CSPP1Q1MSJ5 1256 aa8.12□□□□□ -1.11
HCG18-239ENST00000454129 CABP2Q9NPB3 220 aa8.12□□□□□ -1.11
HCG18-239ENST00000454129 NCBP3Q53F19 620 aaKnown RBP8.12□□□□□ -1.11
HCG18-239ENST00000454129 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.12□□□□□ -1.11
HCG18-239ENST00000454129 UBE2Q2Q8WVN8 375 aa8.12□□□□□ -1.11
HCG18-239ENST00000454129 DIAPH3Q9NSV4 1193 aa8.11□□□□□ -1.11
HCG18-239ENST00000454129 MTHFSP49914 203 aa8.11□□□□□ -1.11
HCG18-239ENST00000454129 TPM4P67936 248 aa8.11□□□□□ -1.11
HCG18-239ENST00000454129 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
HCG18-239ENST00000454129 DDX49Q9Y6V7 483 aaKnown RBP8.11□□□□□ -1.11
HCG18-239ENST00000454129 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
HCG18-239ENST00000454129 CREBRFQ8IUR6 639 aa8.11□□□□□ -1.11
HCG18-239ENST00000454129 SYTL4Q96C24 671 aaPredicted RBP8.11□□□□□ -1.11
HCG18-239ENST00000454129 LRRC9Q6ZRR7 1453 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 WASHC2AQ641Q2 1341 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 GNAI1P63096 354 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 SNAPC4Q5SXM2 1469 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 NLRP6P59044 892 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 NUTM2GQ5VZR2 741 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 TSPYL4Q9UJ04 414 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 H3BQV1 296 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 REC8O95072 547 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 IFFO2Q5TF58 517 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 FAM184AQ8NB25 1140 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 LNPKQ9C0E8 428 aa8.1□□□□□ -1.11
HCG18-239ENST00000454129 DDX58O95786 925 aaKnown RBP8.09□□□□□ -1.11
HCG18-239ENST00000454129 ERICH3Q5RHP9 1530 aa8.09□□□□□ -1.11
HCG18-239ENST00000454129 IFIT2P09913 472 aaKnown RBP8.09□□□□□ -1.11
HCG18-239ENST00000454129 NBPF1Q3BBV0 1214 aa8.09□□□□□ -1.11
HCG18-239ENST00000454129 RSPH6AQ9H0K4 717 aa8.09□□□□□ -1.11
HCG18-239ENST00000454129 PRXQ9BXM0 1461 aa8.09□□□□□ -1.11
HCG18-239ENST00000454129 RUFY2Q8WXA3 655 aa8.09□□□□□ -1.11
HCG18-239ENST00000454129 RAPGEF4Q8WZA2 1011 aa8.09□□□□□ -1.11
HCG18-239ENST00000454129 DNMBPQ6XZF7 1577 aa8.09□□□□□ -1.11
HCG18-239ENST00000454129 ZKSCAN1P17029 563 aaPredicted RBP8.09□□□□□ -1.12
HCG18-239ENST00000454129 TCP11L2Q8N4U5 519 aa8.09□□□□□ -1.12
HCG18-239ENST00000454129 PANK1Q8TE04 598 aa8.09□□□□□ -1.12
HCG18-239ENST00000454129 ARID3AQ99856 593 aa8.09□□□□□ -1.12
HCG18-239ENST00000454129 NCOA2Q15596 1464 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 MARCH6O60337 910 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 DDX11L8A8MPP1 907 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 PHF14O94880 888 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 G3BP1Q13283 466 aaKnown RBP eCLIP8.08□□□□□ -1.12
HCG18-239ENST00000454129 ANO2Q9NQ90 1003 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 NLRP2Q9NX02 1062 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 ATP6V1DQ9Y5K8 247 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 CDCA7LQ96GN5 454 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 USP35Q9P2H5 1018 aa8.08□□□□□ -1.12
HCG18-239ENST00000454129 IFT140Q96RY7 1462 aa8.07□□□□□ -1.12
HCG18-239ENST00000454129 CASKIN1Q8WXD9 1431 aa8.07□□□□□ -1.12
HCG18-239ENST00000454129 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
HCG18-239ENST00000454129 MCTP1Q6DN14 999 aa8.07□□□□□ -1.12
HCG18-239ENST00000454129 CPLX2Q6PUV4 134 aaKnown RBP8.07□□□□□ -1.12
HCG18-239ENST00000454129 GRIN2BQ13224 1484 aa8.07□□□□□ -1.12
HCG18-239ENST00000454129 APPP05067 770 aa8.07□□□□□ -1.12
HCG18-239ENST00000454129 ATF3P18847 181 aa8.07□□□□□ -1.12
HCG18-239ENST00000454129 AKAP17AQ02040 695 aaKnown RBP8.07□□□□□ -1.12
HCG18-239ENST00000454129 MIA2Q96PC5 1412 aa8.06□□□□□ -1.12
HCG18-239ENST00000454129 CHMP4CQ96CF2 233 aa8.06□□□□□ -1.12
HCG18-239ENST00000454129 SLC12A5Q9H2X9 1139 aa8.06□□□□□ -1.12
HCG18-239ENST00000454129 AIMP1Q12904 312 aaKnown RBP8.06□□□□□ -1.12
HCG18-239ENST00000454129 SYNE3Q6ZMZ3 975 aa8.06□□□□□ -1.12
HCG18-239ENST00000454129 TXNDC2Q86VQ3 553 aa8.06□□□□□ -1.12
HCG18-239ENST00000454129 CNTLNQ9NXG0 1405 aa8.06□□□□□ -1.12
HCG18-239ENST00000454129 VPS53Q5VIR6 699 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms