RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
COL27A1-202ENST00000451716 CFAP65Q6ZU64 1925 aaKnown RBP16.22■□□□□ 0.19
COL27A1-202ENST00000451716 B4GALNT3Q6L9W6 998 aa16.22■□□□□ 0.19
COL27A1-202ENST00000451716 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
COL27A1-202ENST00000451716 POGZQ7Z3K3 1410 aa16.21■□□□□ 0.18
COL27A1-202ENST00000451716 SCAF11Q99590 1463 aaKnown RBP16.2■□□□□ 0.18
COL27A1-202ENST00000451716 PPRC1Q5VV67 1664 aaKnown RBP16.19■□□□□ 0.18
COL27A1-202ENST00000451716 EFCAB6Q5THR3 1501 aa16.19■□□□□ 0.18
COL27A1-202ENST00000451716 IQGAP1P46940 1657 aa16.18■□□□□ 0.18
COL27A1-202ENST00000451716 STAC3Q96MF2 364 aa16.18■□□□□ 0.18
COL27A1-202ENST00000451716 CYB5RLQ6IPT4 315 aa16.17■□□□□ 0.18
COL27A1-202ENST00000451716 KNSTRNQ9Y448 316 aa16.17■□□□□ 0.18
COL27A1-202ENST00000451716 RBM19Q9Y4C8 960 aaKnown RBP16.17■□□□□ 0.18
COL27A1-202ENST00000451716 WASHC2CQ9Y4E1 1318 aa16.17■□□□□ 0.18
COL27A1-202ENST00000451716 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
COL27A1-202ENST00000451716 FRMPD1Q5SYB0 1578 aa16.16■□□□□ 0.18
COL27A1-202ENST00000451716 NPATQ14207 1427 aa16.15■□□□□ 0.18
COL27A1-202ENST00000451716 NUTM2DQ5VT03 806 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-202ENST00000451716 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
COL27A1-202ENST00000451716 MLH3Q9UHC1 1453 aa16.14■□□□□ 0.17
COL27A1-202ENST00000451716 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.14■□□□□ 0.17
COL27A1-202ENST00000451716 NOS1P29475 1434 aa16.14■□□□□ 0.17
COL27A1-202ENST00000451716 MROH2AA6NES4 1674 aa16.14■□□□□ 0.17
COL27A1-202ENST00000451716 KIF1BO60333 1816 aa16.13■□□□□ 0.17
COL27A1-202ENST00000451716 CDCA8Q53HL2 280 aa16.13■□□□□ 0.17
COL27A1-202ENST00000451716 AMER1Q5JTC6 1135 aaPredicted RBP16.13■□□□□ 0.17
COL27A1-202ENST00000451716 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
COL27A1-202ENST00000451716 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
COL27A1-202ENST00000451716 CDCA7LQ96GN5 454 aa16.12■□□□□ 0.17
COL27A1-202ENST00000451716 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
COL27A1-202ENST00000451716 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
COL27A1-202ENST00000451716 TMEM132EQ6IEE7 984 aa16.11■□□□□ 0.17
COL27A1-202ENST00000451716 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
COL27A1-202ENST00000451716 LMTK2Q8IWU2 1503 aa16.11■□□□□ 0.17
COL27A1-202ENST00000451716 CFAP74Q9C0B2 1584 aa16.11■□□□□ 0.17
COL27A1-202ENST00000451716 PPP2R1AP30153 589 aa16.11■□□□□ 0.17
COL27A1-202ENST00000451716 MYOM2P54296 1465 aa16.1■□□□□ 0.17
COL27A1-202ENST00000451716 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
COL27A1-202ENST00000451716 RNF123Q5XPI4 1314 aa16.1■□□□□ 0.17
COL27A1-202ENST00000451716 DEKP35659 375 aaKnown RBP16.07■□□□□ 0.16
COL27A1-202ENST00000451716 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
COL27A1-202ENST00000451716 ABCC3O15438 1527 aa16.07■□□□□ 0.16
COL27A1-202ENST00000451716 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
COL27A1-202ENST00000451716 KIAA1210Q9ULL0 1709 aa16.06■□□□□ 0.16
COL27A1-202ENST00000451716 YEATS2Q9ULM3 1422 aa16.06■□□□□ 0.16
COL27A1-202ENST00000451716 NEO1Q92859 1461 aa16.06■□□□□ 0.16
COL27A1-202ENST00000451716 ADGRB3O60242 1522 aa16.06■□□□□ 0.16
COL27A1-202ENST00000451716 SYNMO15061 1565 aa16.06■□□□□ 0.16
COL27A1-202ENST00000451716 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
COL27A1-202ENST00000451716 CARD14Q9BXL6 1004 aa16.05■□□□□ 0.16
COL27A1-202ENST00000451716 RCAN3Q9UKA8 241 aa16.05■□□□□ 0.16
COL27A1-202ENST00000451716 MYOM1P52179 1685 aa16.05■□□□□ 0.16
COL27A1-202ENST00000451716 NRXN1Q9ULB1 1477 aa16.04■□□□□ 0.16
COL27A1-202ENST00000451716 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
COL27A1-202ENST00000451716 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
COL27A1-202ENST00000451716 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.166e-7■□□□□ 10.8
COL27A1-202ENST00000451716 ASXL1Q8IXJ9 1541 aa16.04■□□□□ 0.16
COL27A1-202ENST00000451716 BLMP54132 1417 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-202ENST00000451716 DIP2CQ9Y2E4 1556 aa16.03■□□□□ 0.16
COL27A1-202ENST00000451716 KDM5AP29375 1690 aaKnown RBP16.02■□□□□ 0.16
COL27A1-202ENST00000451716 RRP1P56182 461 aaKnown RBP16.02■□□□□ 0.16
COL27A1-202ENST00000451716 FAM69CQ0P6D2 419 aa16.02■□□□□ 0.16
COL27A1-202ENST00000451716 SIGLEC1Q9BZZ2 1709 aa16.02■□□□□ 0.15
COL27A1-202ENST00000451716 PIK3C2GO75747 1445 aa16.02■□□□□ 0.15
COL27A1-202ENST00000451716 IDI1Q13907 227 aa16.02■□□□□ 0.15
COL27A1-202ENST00000451716 PDE3BQ13370 1112 aa16.01■□□□□ 0.15
COL27A1-202ENST00000451716 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
COL27A1-202ENST00000451716 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
COL27A1-202ENST00000451716 CAMSAP1Q5T5Y3 1602 aa16■□□□□ 0.15
COL27A1-202ENST00000451716 PLIN1O60240 522 aa16■□□□□ 0.15
COL27A1-202ENST00000451716 SAFB2Q14151 953 aaKnown RBP eCLIP16■□□□□ 0.15
COL27A1-202ENST00000451716 EXOC6Q8TAG9 804 aa16■□□□□ 0.15
COL27A1-202ENST00000451716 PPLO60437 1756 aa15.99■□□□□ 0.15
COL27A1-202ENST00000451716 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
COL27A1-202ENST00000451716 RICTORQ6R327 1708 aa15.98■□□□□ 0.15
COL27A1-202ENST00000451716 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
COL27A1-202ENST00000451716 FBXO31Q5XUX0 539 aaPredicted RBP15.97■□□□□ 0.15
COL27A1-202ENST00000451716 RPGRIP1LQ68CZ1 1315 aa15.97■□□□□ 0.15
COL27A1-202ENST00000451716 STK26Q9P289 416 aa15.97■□□□□ 0.15
COL27A1-202ENST00000451716 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
COL27A1-202ENST00000451716 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
COL27A1-202ENST00000451716 NPC1L1Q9UHC9 1359 aa15.95■□□□□ 0.14
COL27A1-202ENST00000451716 SETBP1Q9Y6X0 1596 aa15.94■□□□□ 0.14
COL27A1-202ENST00000451716 INSRP06213 1382 aa15.94■□□□□ 0.14
COL27A1-202ENST00000451716 SBNO2Q9Y2G9 1366 aa15.94■□□□□ 0.14
COL27A1-202ENST00000451716 MSH5O43196 834 aa15.94■□□□□ 0.14
COL27A1-202ENST00000451716 ZMYM4Q5VZL5 1548 aa15.94■□□□□ 0.14
COL27A1-202ENST00000451716 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
COL27A1-202ENST00000451716 MYO3AQ8NEV4 1616 aa15.93■□□□□ 0.14
COL27A1-202ENST00000451716 TSPOAP1O95153 1857 aa15.93■□□□□ 0.14
COL27A1-202ENST00000451716 APAF1O14727 1248 aa15.93■□□□□ 0.14
COL27A1-202ENST00000451716 QRICH2Q9H0J4 1663 aa15.92■□□□□ 0.14
COL27A1-202ENST00000451716 CABP2Q9NPB3 220 aa15.92■□□□□ 0.14
COL27A1-202ENST00000451716 NEXMIFQ5QGS0 1516 aa15.91■□□□□ 0.14
COL27A1-202ENST00000451716 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
COL27A1-202ENST00000451716 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
COL27A1-202ENST00000451716 PIK3C2BO00750 1634 aa15.91■□□□□ 0.14
COL27A1-202ENST00000451716 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
COL27A1-202ENST00000451716 MLECQ14165 292 aa15.91■□□□□ 0.14
COL27A1-202ENST00000451716 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms