RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 SYNMO15061 1565 aa11□□□□□ -0.65
AC004540.1-206ENST00000448056 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
AC004540.1-206ENST00000448056 NLRP1Q9C000 1473 aa11□□□□□ -0.65
AC004540.1-206ENST00000448056 SETD1BQ9UPS6 1966 aaKnown RBP10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 CHGAP10645 457 aaKnown RBP10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 SPDYE2Q495Y8 402 aa10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 THEMISQ8N1K5 641 aaPredicted RBP10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 SIN3AQ96ST3 1273 aa10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 CCDC144AA2RUR9 1427 aa10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 TRPM2O94759 1503 aa10.99□□□□□ -0.65
AC004540.1-206ENST00000448056 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
AC004540.1-206ENST00000448056 UGGT1Q9NYU2 1555 aa10.98□□□□□ -0.65
AC004540.1-206ENST00000448056 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
AC004540.1-206ENST00000448056 PROM2Q8N271 834 aa10.97□□□□□ -0.65
AC004540.1-206ENST00000448056 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
AC004540.1-206ENST00000448056 A2ML1A8K2U0 1454 aa10.97□□□□□ -0.65
AC004540.1-206ENST00000448056 SPHKAPQ2M3C7 1700 aa10.97□□□□□ -0.65
AC004540.1-206ENST00000448056 RGL3Q3MIN7 710 aa10.96□□□□□ -0.65
AC004540.1-206ENST00000448056 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
AC004540.1-206ENST00000448056 PIK3C2BO00750 1634 aa10.95□□□□□ -0.66
AC004540.1-206ENST00000448056 CLTCL1P53675 1640 aa10.95□□□□□ -0.66
AC004540.1-206ENST00000448056 HSPA2P54652 639 aa10.94□□□□□ -0.66
AC004540.1-206ENST00000448056 ZNF326Q5BKZ1 582 aaKnown RBP10.94□□□□□ -0.66
AC004540.1-206ENST00000448056 SPATA31E1Q6ZUB1 1445 aa10.93□□□□□ -0.66
AC004540.1-206ENST00000448056 RPGRIP1LQ68CZ1 1315 aa10.93□□□□□ -0.66
AC004540.1-206ENST00000448056 HDGFP51858 240 aaKnown RBP10.93□□□□□ -0.66
AC004540.1-206ENST00000448056 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
AC004540.1-206ENST00000448056 MYO3AQ8NEV4 1616 aa10.93□□□□□ -0.66
AC004540.1-206ENST00000448056 CEP170BQ9Y4F5 1589 aaPredicted RBP10.93□□□□□ -0.66
AC004540.1-206ENST00000448056 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
AC004540.1-206ENST00000448056 TMEM2Q9UHN6 1383 aa10.92□□□□□ -0.66
AC004540.1-206ENST00000448056 TMEM131LA2VDJ0 1609 aa10.92□□□□□ -0.66
AC004540.1-206ENST00000448056 LTKP29376 864 aa10.92□□□□□ -0.66
AC004540.1-206ENST00000448056 TXNDC2Q86VQ3 553 aa10.92□□□□□ -0.66
AC004540.1-206ENST00000448056 ANKLE2Q86XL3 938 aa10.92□□□□□ -0.66
AC004540.1-206ENST00000448056 ADGRB3O60242 1522 aa10.91□□□□□ -0.66
AC004540.1-206ENST00000448056 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.91□□□□□ -0.66
AC004540.1-206ENST00000448056 EID1Q9Y6B2 187 aa10.91□□□□□ -0.66
AC004540.1-206ENST00000448056 VGFO15240 615 aaPredicted RBP10.9□□□□□ -0.66
AC004540.1-206ENST00000448056 NUTM2DQ5VT03 806 aaPredicted RBP10.9□□□□□ -0.66
AC004540.1-206ENST00000448056 DCAF11Q8TEB1 546 aa10.9□□□□□ -0.66
AC004540.1-206ENST00000448056 L3MBTL2Q969R5 705 aa10.9□□□□□ -0.66
AC004540.1-206ENST00000448056 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
AC004540.1-206ENST00000448056 NCKAP5LQ9HCH0 1330 aa10.89□□□□□ -0.67
AC004540.1-206ENST00000448056 KDM5AP29375 1690 aaKnown RBP10.89□□□□□ -0.67
AC004540.1-206ENST00000448056 ZNF142P52746 1687 aaPredicted RBP10.89□□□□□ -0.67
AC004540.1-206ENST00000448056 STAC3Q96MF2 364 aa10.89□□□□□ -0.67
AC004540.1-206ENST00000448056 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
AC004540.1-206ENST00000448056 RIMS2Q9UQ26 1411 aa10.89□□□□□ -0.67
AC004540.1-206ENST00000448056 NEURL4Q96JN8 1562 aa10.89□□□□□ -0.67
AC004540.1-206ENST00000448056 ARHGAP23Q9P227 1491 aa10.88□□□□□ -0.67
AC004540.1-206ENST00000448056 PPP1R15AO75807 674 aaPredicted RBP10.88□□□□□ -0.67
AC004540.1-206ENST00000448056 ZFYVE9O95405 1425 aa10.88□□□□□ -0.67
AC004540.1-206ENST00000448056 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
AC004540.1-206ENST00000448056 KIF1BO60333 1816 aa10.88□□□□□ -0.67
AC004540.1-206ENST00000448056 SLIT1O75093 1534 aa10.88□□□□□ -0.67
AC004540.1-206ENST00000448056 TONSLQ96HA7 1378 aa10.87□□□□□ -0.67
AC004540.1-206ENST00000448056 ADGRF5Q8IZF2 1346 aa10.86□□□□□ -0.67
AC004540.1-206ENST00000448056 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
AC004540.1-206ENST00000448056 BCANQ96GW7 911 aa10.85□□□□□ -0.67
AC004540.1-206ENST00000448056 MYO5BQ9ULV0 1848 aa10.85□□□□□ -0.67
AC004540.1-206ENST00000448056 SCAF11Q99590 1463 aaKnown RBP10.85□□□□□ -0.67
AC004540.1-206ENST00000448056 NEXMIFQ5QGS0 1516 aa10.84□□□□□ -0.67
AC004540.1-206ENST00000448056 PLEKHG1Q9ULL1 1385 aa10.83□□□□□ -0.68
AC004540.1-206ENST00000448056 MED14O60244 1454 aa10.82□□□□□ -0.68
AC004540.1-206ENST00000448056 SLC26A8Q96RN1 970 aa10.82□□□□□ -0.68
AC004540.1-206ENST00000448056 TBX22Q9Y458 520 aa10.82□□□□□ -0.68
AC004540.1-206ENST00000448056 NPHP4O75161 1426 aaPredicted RBP10.82□□□□□ -0.68
AC004540.1-206ENST00000448056 C14orf93Q9H972 538 aaKnown RBP10.81□□□□□ -0.68
AC004540.1-206ENST00000448056 MYOM2P54296 1465 aa10.81□□□□□ -0.68
AC004540.1-206ENST00000448056 NRXN1Q9ULB1 1477 aa10.81□□□□□ -0.68
AC004540.1-206ENST00000448056 NBPF8Q3BBV2 869 aa10.8□□□□□ -0.68
AC004540.1-206ENST00000448056 CFAP70Q5T0N1 1121 aa10.8□□□□□ -0.68
AC004540.1-206ENST00000448056 PPLO60437 1756 aa10.8□□□□□ -0.68
AC004540.1-206ENST00000448056 STRCQ7RTU9 1775 aa10.8□□□□□ -0.68
AC004540.1-206ENST00000448056 PIK3C2GO75747 1445 aa10.79□□□□□ -0.68
AC004540.1-206ENST00000448056 ADAMTS13Q76LX8 1427 aa10.79□□□□□ -0.68
AC004540.1-206ENST00000448056 AKT1S1Q96B36 256 aa10.79□□□□□ -0.68
AC004540.1-206ENST00000448056 PRAG1Q86YV5 1406 aa10.78□□□□□ -0.68
AC004540.1-206ENST00000448056 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
AC004540.1-206ENST00000448056 IFT172Q9UG01 1749 aa10.78□□□□□ -0.68
AC004540.1-206ENST00000448056 NBPF1Q3BBV0 1214 aa10.77□□□□□ -0.69
AC004540.1-206ENST00000448056 TMEM132EQ6IEE7 984 aa10.77□□□□□ -0.69
AC004540.1-206ENST00000448056 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
AC004540.1-206ENST00000448056 SETBP1Q9Y6X0 1596 aa10.77□□□□□ -0.69
AC004540.1-206ENST00000448056 METP08581 1390 aa10.77□□□□□ -0.69
AC004540.1-206ENST00000448056 ALKQ9UM73 1620 aa10.76□□□□□ -0.69
AC004540.1-206ENST00000448056 POLR1AO95602 1720 aaPredicted RBP10.75□□□□□ -0.69
AC004540.1-206ENST00000448056 KCNA6P17658 529 aa10.75□□□□□ -0.69
AC004540.1-206ENST00000448056 ZEB1P37275 1124 aaPredicted RBP10.75□□□□□ -0.69
AC004540.1-206ENST00000448056 IQGAP1P46940 1657 aa10.75□□□□□ -0.69
AC004540.1-206ENST00000448056 NRXN3Q9Y4C0 1643 aa10.74□□□□□ -0.69
AC004540.1-206ENST00000448056 AMOTL2Q9Y2J4 779 aa10.74□□□□□ -0.69
AC004540.1-206ENST00000448056 PIK3R4Q99570 1358 aa10.74□□□□□ -0.69
AC004540.1-206ENST00000448056 STK26Q9P289 416 aa10.73□□□□□ -0.69
AC004540.1-206ENST00000448056 ZNF335Q9H4Z2 1342 aaPredicted RBP10.72□□□□□ -0.69
AC004540.1-206ENST00000448056 ROCK2O75116 1388 aaKnown RBP10.72□□□□□ -0.69
AC004540.1-206ENST00000448056 PTPRUQ92729 1446 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms