RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 TIAM1Q13009 1591 aa9.46□□□□□ -0.89
ECHDC1-208ENST00000436638 FAM205CA6NFA0 338 aa9.46□□□□□ -0.9
ECHDC1-208ENST00000436638 PTCD2Q8WV60 388 aaKnown RBP9.46□□□□□ -0.9
ECHDC1-208ENST00000436638 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
ECHDC1-208ENST00000436638 NUDT7P0C024 238 aa9.45□□□□□ -0.9
ECHDC1-208ENST00000436638 EHBP1L1Q8N3D4 1523 aa9.45□□□□□ -0.9
ECHDC1-208ENST00000436638 DIP2BQ9P265 1576 aa9.45□□□□□ -0.9
ECHDC1-208ENST00000436638 KIF14Q15058 1648 aa9.45□□□□□ -0.9
ECHDC1-208ENST00000436638 ERBB3P21860 1342 aa9.44□□□□□ -0.9
ECHDC1-208ENST00000436638 CD109Q6YHK3 1445 aa9.44□□□□□ -0.9
ECHDC1-208ENST00000436638 GLI2P10070 1586 aa9.44□□□□□ -0.9
ECHDC1-208ENST00000436638 LRRC9Q6ZRR7 1453 aa9.43□□□□□ -0.9
ECHDC1-208ENST00000436638 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
ECHDC1-208ENST00000436638 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
ECHDC1-208ENST00000436638 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
ECHDC1-208ENST00000436638 CCNB3Q8WWL7 1395 aa9.42□□□□□ -0.9
ECHDC1-208ENST00000436638 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
ECHDC1-208ENST00000436638 EMILIN3Q9NT22 766 aa9.41□□□□□ -0.9
ECHDC1-208ENST00000436638 SUPT6HQ7KZ85 1726 aaKnown RBP9.41□□□□□ -0.9
ECHDC1-208ENST00000436638 ABCA9Q8IUA7 1624 aa9.41□□□□□ -0.9
ECHDC1-208ENST00000436638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.41□□□□□ -0.9
ECHDC1-208ENST00000436638 TEX14Q8IWB6 1497 aa9.4□□□□□ -0.9
ECHDC1-208ENST00000436638 EIF5BO60841 1220 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-208ENST00000436638 PPARGC1BQ86YN6 1023 aaKnown RBP9.4□□□□□ -0.9
ECHDC1-208ENST00000436638 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.9
ECHDC1-208ENST00000436638 KIF13AQ9H1H9 1805 aa9.4□□□□□ -0.91
ECHDC1-208ENST00000436638 E2F4Q16254 413 aa9.39□□□□□ -0.91
ECHDC1-208ENST00000436638 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
ECHDC1-208ENST00000436638 EFCAB2Q5VUJ9 269 aa9.39□□□□□ -0.91
ECHDC1-208ENST00000436638 CFDP1Q9UEE9 299 aaPredicted RBP9.39□□□□□ -0.91
ECHDC1-208ENST00000436638 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
ECHDC1-208ENST00000436638 TSPOAP1O95153 1857 aa9.38□□□□□ -0.91
ECHDC1-208ENST00000436638 MAP3K4Q9Y6R4 1608 aa9.38□□□□□ -0.91
ECHDC1-208ENST00000436638 ZNF316A6NFI3 1004 aaPredicted RBP9.38□□□□□ -0.91
ECHDC1-208ENST00000436638 CAMK2BQ13554 666 aa9.38□□□□□ -0.91
ECHDC1-208ENST00000436638 ZNF777Q9ULD5 760 aaPredicted RBP9.38□□□□□ -0.91
ECHDC1-208ENST00000436638 LHX6Q9UPM6 363 aa9.38□□□□□ -0.91
ECHDC1-208ENST00000436638 PLCH2O75038 1416 aa9.38□□□□□ -0.91
ECHDC1-208ENST00000436638 TTC37Q6PGP7 1564 aa9.37□□□□□ -0.91
ECHDC1-208ENST00000436638 ARHGAP5Q13017 1502 aa9.37□□□□□ -0.91
ECHDC1-208ENST00000436638 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
ECHDC1-208ENST00000436638 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
ECHDC1-208ENST00000436638 CDAN1Q8IWY9 1227 aa9.37□□□□□ -0.91
ECHDC1-208ENST00000436638 MYO5CQ9NQX4 1742 aa9.36□□□□□ -0.91
ECHDC1-208ENST00000436638 DPYSL4O14531 572 aa9.36□□□□□ -0.91
ECHDC1-208ENST00000436638 EVI5O60447 810 aa9.36□□□□□ -0.91
ECHDC1-208ENST00000436638 HOMEZQ8IX15 550 aa9.36□□□□□ -0.91
ECHDC1-208ENST00000436638 TIMELESSQ9UNS1 1208 aa9.36□□□□□ -0.91
ECHDC1-208ENST00000436638 PHLDB1Q86UU1 1377 aa9.36□□□□□ -0.91
ECHDC1-208ENST00000436638 FANCAO15360 1455 aa9.35□□□□□ -0.91
ECHDC1-208ENST00000436638 CFAP74Q9C0B2 1584 aa9.35□□□□□ -0.91
ECHDC1-208ENST00000436638 KDM2AQ9Y2K7 1162 aa9.35□□□□□ -0.91
ECHDC1-208ENST00000436638 ITSN2Q9NZM3 1697 aa9.35□□□□□ -0.91
ECHDC1-208ENST00000436638 GPATCH8Q9UKJ3 1502 aaKnown RBP9.35□□□□□ -0.91
ECHDC1-208ENST00000436638 NEO1Q92859 1461 aa9.34□□□□□ -0.91
ECHDC1-208ENST00000436638 AKNAQ7Z591 1439 aa9.34□□□□□ -0.91
ECHDC1-208ENST00000436638 KDM4FA0A1W2PPD8 638 aa9.34□□□□□ -0.91
ECHDC1-208ENST00000436638 ARAP3Q8WWN8 1544 aa9.34□□□□□ -0.91
ECHDC1-208ENST00000436638 PREX2Q70Z35 1606 aa9.34□□□□□ -0.91
ECHDC1-208ENST00000436638 MYOM3Q5VTT5 1437 aa9.33□□□□□ -0.92
ECHDC1-208ENST00000436638 MIA2Q96PC5 1412 aa9.32□□□□□ -0.92
ECHDC1-208ENST00000436638 CDC42BPAQ5VT25 1732 aa9.32□□□□□ -0.92
ECHDC1-208ENST00000436638 PCDH10Q9P2E7 1040 aa9.32□□□□□ -0.92
ECHDC1-208ENST00000436638 MYT1LQ9UL68 1186 aa9.32□□□□□ -0.92
ECHDC1-208ENST00000436638 PLEKHH2Q8IVE3 1493 aa9.32□□□□□ -0.92
ECHDC1-208ENST00000436638 PPRC1Q5VV67 1664 aaKnown RBP9.32□□□□□ -0.92
ECHDC1-208ENST00000436638 FAM50AQ14320 339 aaKnown RBP9.31□□□□□ -0.92
ECHDC1-208ENST00000436638 DENND4BO75064 1496 aaPredicted RBP9.31□□□□□ -0.92
ECHDC1-208ENST00000436638 ADGRL1O94910 1474 aa9.31□□□□□ -0.92
ECHDC1-208ENST00000436638 CDC42BPBQ9Y5S2 1711 aa9.31□□□□□ -0.92
ECHDC1-208ENST00000436638 KDM6BO15054 1643 aa9.31□□□□□ -0.92
ECHDC1-208ENST00000436638 SCAPERQ9BY12 1400 aa9.31□□□□□ -0.92
ECHDC1-208ENST00000436638 PSDA5PKW4 1024 aaPredicted RBP9.3□□□□□ -0.92
ECHDC1-208ENST00000436638 HNRNPMP52272 730 aaKnown RBP eCLIP9.3□□□□□ -0.923e-8■■■■■ 29
ECHDC1-208ENST00000436638 FGD6Q6ZV73 1430 aa9.3□□□□□ -0.92
ECHDC1-208ENST00000436638 RSPH4AQ5TD94 716 aa9.29□□□□□ -0.92
ECHDC1-208ENST00000436638 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
ECHDC1-208ENST00000436638 ZNF687Q8N1G0 1237 aa9.29□□□□□ -0.92
ECHDC1-208ENST00000436638 ZNF454Q8N9F8 522 aa9.29□□□□□ -0.92
ECHDC1-208ENST00000436638 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-208ENST00000436638 ZNF644Q9H582 1327 aaPredicted RBP9.29□□□□□ -0.92
ECHDC1-208ENST00000436638 CAMSAP2Q08AD1 1489 aa9.28□□□□□ -0.92
ECHDC1-208ENST00000436638 RAPGEF3O95398 923 aa9.28□□□□□ -0.92
ECHDC1-208ENST00000436638 TSPY4P0CV99 314 aa9.28□□□□□ -0.92
ECHDC1-208ENST00000436638 TSPY10P0CW01 314 aa9.28□□□□□ -0.92
ECHDC1-208ENST00000436638 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
ECHDC1-208ENST00000436638 KIAA1107Q9UPP5 1409 aa9.28□□□□□ -0.92
ECHDC1-208ENST00000436638 SAMD9LQ8IVG5 1584 aa9.28□□□□□ -0.92
ECHDC1-208ENST00000436638 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.92
ECHDC1-208ENST00000436638 ABCC1P33527 1531 aa9.27□□□□□ -0.93
ECHDC1-208ENST00000436638 SYCP2Q9BX26 1530 aa9.26□□□□□ -0.93
ECHDC1-208ENST00000436638 AFAP1Q8N556 730 aa9.26□□□□□ -0.93
ECHDC1-208ENST00000436638 KCNV2Q8TDN2 545 aa9.26□□□□□ -0.93
ECHDC1-208ENST00000436638 ZNF518AQ6AHZ1 1483 aa9.26□□□□□ -0.93
ECHDC1-208ENST00000436638 POGZQ7Z3K3 1410 aa9.25□□□□□ -0.93
ECHDC1-208ENST00000436638 TULP1O00294 542 aaPredicted RBP9.25□□□□□ -0.93
ECHDC1-208ENST00000436638 TCOF1Q13428 1488 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-208ENST00000436638 SPAG9O60271 1321 aaKnown RBP9.25□□□□□ -0.93
ECHDC1-208ENST00000436638 TRAPPC8Q9Y2L5 1435 aa9.24□□□□□ -0.93
ECHDC1-208ENST00000436638 CCDC141Q6ZP82 1450 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms