RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ANKLE2Q86XL3 938 aa8.61□□□□□ -1.03
HMGB3P24-201ENST00000433260 E9PCH4 1651 aa8.61□□□□□ -1.03
HMGB3P24-201ENST00000433260 TET3O43151 1660 aa8.61□□□□□ -1.03
HMGB3P24-201ENST00000433260 ZNF142P52746 1687 aaPredicted RBP8.61□□□□□ -1.03
HMGB3P24-201ENST00000433260 NLRP1Q9C000 1473 aa8.6□□□□□ -1.03
HMGB3P24-201ENST00000433260 PKD2Q13563 968 aa8.6□□□□□ -1.03
HMGB3P24-201ENST00000433260 TXNDC2Q86VQ3 553 aa8.6□□□□□ -1.03
HMGB3P24-201ENST00000433260 PIK3C2BO00750 1634 aa8.6□□□□□ -1.03
HMGB3P24-201ENST00000433260 IQGAP3Q86VI3 1631 aa8.6□□□□□ -1.03
HMGB3P24-201ENST00000433260 HFM1A2PYH4 1435 aa8.6□□□□□ -1.03
HMGB3P24-201ENST00000433260 EFCAB6Q5THR3 1501 aa8.59□□□□□ -1.03
HMGB3P24-201ENST00000433260 NUTM2DQ5VT03 806 aaPredicted RBP8.59□□□□□ -1.03
HMGB3P24-201ENST00000433260 BCANQ96GW7 911 aa8.59□□□□□ -1.03
HMGB3P24-201ENST00000433260 SLC52A1Q9NWF4 448 aa8.59□□□□□ -1.03
HMGB3P24-201ENST00000433260 UBR1Q8IWV7 1749 aa8.59□□□□□ -1.03
HMGB3P24-201ENST00000433260 SYNMO15061 1565 aa8.58□□□□□ -1.04
HMGB3P24-201ENST00000433260 LTKP29376 864 aa8.58□□□□□ -1.04
HMGB3P24-201ENST00000433260 MYO5BQ9ULV0 1848 aa8.58□□□□□ -1.04
HMGB3P24-201ENST00000433260 NOS1P29475 1434 aa8.57□□□□□ -1.04
HMGB3P24-201ENST00000433260 SETD5Q9C0A6 1442 aa8.57□□□□□ -1.04
HMGB3P24-201ENST00000433260 MPHOSPH9Q99550 1183 aa8.57□□□□□ -1.04
HMGB3P24-201ENST00000433260 EID1Q9Y6B2 187 aa8.57□□□□□ -1.04
HMGB3P24-201ENST00000433260 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
HMGB3P24-201ENST00000433260 PTPRTO14522 1441 aa8.56□□□□□ -1.04
HMGB3P24-201ENST00000433260 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
HMGB3P24-201ENST00000433260 PLA2R1Q13018 1463 aa8.56□□□□□ -1.04
HMGB3P24-201ENST00000433260 RPRD2Q5VT52 1461 aaKnown RBP8.56□□□□□ -1.04
HMGB3P24-201ENST00000433260 ZNF335Q9H4Z2 1342 aaPredicted RBP8.55□□□□□ -1.04
HMGB3P24-201ENST00000433260 ZNF326Q5BKZ1 582 aaKnown RBP8.55□□□□□ -1.04
HMGB3P24-201ENST00000433260 AMER1Q5JTC6 1135 aaPredicted RBP8.55□□□□□ -1.04
HMGB3P24-201ENST00000433260 AKT1S1Q96B36 256 aa8.55□□□□□ -1.04
HMGB3P24-201ENST00000433260 RAB3GAP2Q9H2M9 1393 aa8.55□□□□□ -1.04
HMGB3P24-201ENST00000433260 SPHKAPQ2M3C7 1700 aa8.54□□□□□ -1.04
HMGB3P24-201ENST00000433260 PPP1R15AO75807 674 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P24-201ENST00000433260 VASPP50552 380 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P24-201ENST00000433260 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
HMGB3P24-201ENST00000433260 ILDR1Q86SU0 546 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P24-201ENST00000433260 SLC26A8Q96RN1 970 aa8.54□□□□□ -1.04
HMGB3P24-201ENST00000433260 NPHP4O75161 1426 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P24-201ENST00000433260 NEURL4Q96JN8 1562 aa8.53□□□□□ -1.04
HMGB3P24-201ENST00000433260 TMEM2Q9UHN6 1383 aa8.53□□□□□ -1.04
HMGB3P24-201ENST00000433260 TMEM131LA2VDJ0 1609 aa8.52□□□□□ -1.05
HMGB3P24-201ENST00000433260 IQGAP1P46940 1657 aa8.52□□□□□ -1.05
HMGB3P24-201ENST00000433260 KIF1BO60333 1816 aa8.52□□□□□ -1.05
HMGB3P24-201ENST00000433260 SCAF11Q99590 1463 aaKnown RBP8.51□□□□□ -1.05
HMGB3P24-201ENST00000433260 ARHGAP23Q9P227 1491 aa8.51□□□□□ -1.05
HMGB3P24-201ENST00000433260 ADGRB3O60242 1522 aa8.51□□□□□ -1.05
HMGB3P24-201ENST00000433260 RGL3Q3MIN7 710 aa8.51□□□□□ -1.05
HMGB3P24-201ENST00000433260 RIMS2Q9UQ26 1411 aa8.51□□□□□ -1.05
HMGB3P24-201ENST00000433260 SLIT1O75093 1534 aa8.5□□□□□ -1.05
HMGB3P24-201ENST00000433260 KDM5AP29375 1690 aaKnown RBP8.5□□□□□ -1.05
HMGB3P24-201ENST00000433260 CLTCL1P53675 1640 aa8.5□□□□□ -1.05
HMGB3P24-201ENST00000433260 LTBP4Q8N2S1 1624 aa8.5□□□□□ -1.05
HMGB3P24-201ENST00000433260 MED14O60244 1454 aa8.5□□□□□ -1.05
HMGB3P24-201ENST00000433260 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.49□□□□□ -1.05
HMGB3P24-201ENST00000433260 FBXO41Q8TF61 875 aa8.49□□□□□ -1.05
HMGB3P24-201ENST00000433260 RBM33Q96EV2 1170 aaKnown RBP8.49□□□□□ -1.05
HMGB3P24-201ENST00000433260 ACIN1Q9UKV3 1341 aaKnown RBP8.49□□□□□ -1.05
HMGB3P24-201ENST00000433260 STRCP1A6NGW2 1772 aa8.48□□□□□ -1.05
HMGB3P24-201ENST00000433260 PLEKHG5O94827 1062 aa8.48□□□□□ -1.05
HMGB3P24-201ENST00000433260 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P24-201ENST00000433260 HRCP23327 699 aa8.47□□□□□ -1.05
HMGB3P24-201ENST00000433260 PROSER2Q86WR7 435 aaPredicted RBP8.47□□□□□ -1.05
HMGB3P24-201ENST00000433260 SPDYE1Q8NFV5 336 aaPredicted RBP8.47□□□□□ -1.05
HMGB3P24-201ENST00000433260 TRPM2O94759 1503 aa8.47□□□□□ -1.05
HMGB3P24-201ENST00000433260 ZFYVE9O95405 1425 aa8.46□□□□□ -1.05
HMGB3P24-201ENST00000433260 PLCD3Q8N3E9 789 aa8.46□□□□□ -1.06
HMGB3P24-201ENST00000433260 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.06
HMGB3P24-201ENST00000433260 UBAP1LF5GYI3 381 aa8.45□□□□□ -1.06
HMGB3P24-201ENST00000433260 VGFO15240 615 aaPredicted RBP8.45□□□□□ -1.06
HMGB3P24-201ENST00000433260 KCNA6P17658 529 aa8.45□□□□□ -1.06
HMGB3P24-201ENST00000433260 PIP4K2BP78356 416 aa8.45□□□□□ -1.06
HMGB3P24-201ENST00000433260 TBX22Q9Y458 520 aa8.45□□□□□ -1.06
HMGB3P24-201ENST00000433260 PLEKHG1Q9ULL1 1385 aa8.45□□□□□ -1.06
HMGB3P24-201ENST00000433260 KDM2AQ9Y2K7 1162 aa8.44□□□□□ -1.06
HMGB3P24-201ENST00000433260 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
HMGB3P24-201ENST00000433260 CHD2O14647 1828 aaKnown RBP8.43□□□□□ -1.06
HMGB3P24-201ENST00000433260 MIER1Q8N108 512 aa8.43□□□□□ -1.06
HMGB3P24-201ENST00000433260 KLHL34Q8N239 644 aa8.43□□□□□ -1.06
HMGB3P24-201ENST00000433260 AMOTL2Q9Y2J4 779 aa8.43□□□□□ -1.06
HMGB3P24-201ENST00000433260 CPS1P31327 1500 aa8.43□□□□□ -1.06
HMGB3P24-201ENST00000433260 NEXMIFQ5QGS0 1516 aa8.43□□□□□ -1.06
HMGB3P24-201ENST00000433260 PPLO60437 1756 aa8.43□□□□□ -1.06
HMGB3P24-201ENST00000433260 TOM1O60784 492 aa8.42□□□□□ -1.06
HMGB3P24-201ENST00000433260 C14orf37Q86TY3 774 aa8.42□□□□□ -1.06
HMGB3P24-201ENST00000433260 REM2Q8IYK8 340 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P24-201ENST00000433260 RTN4Q9NQC3 1192 aaKnown RBP8.42□□□□□ -1.06
HMGB3P24-201ENST00000433260 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
HMGB3P24-201ENST00000433260 ADGRF5Q8IZF2 1346 aa8.42□□□□□ -1.06
HMGB3P24-201ENST00000433260 ADAMTS13Q76LX8 1427 aa8.42□□□□□ -1.06
HMGB3P24-201ENST00000433260 LRRC7Q96NW7 1537 aa8.42□□□□□ -1.06
HMGB3P24-201ENST00000433260 XIRP1Q702N8 1843 aaKnown RBP8.41□□□□□ -1.06
HMGB3P24-201ENST00000433260 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
HMGB3P24-201ENST00000433260 NEUROD1Q13562 356 aa8.41□□□□□ -1.06
HMGB3P24-201ENST00000433260 DCAF11Q8TEB1 546 aa8.41□□□□□ -1.06
HMGB3P24-201ENST00000433260 SIN3AQ96ST3 1273 aa8.41□□□□□ -1.06
HMGB3P24-201ENST00000433260 PCGF6Q9BYE7 350 aa8.41□□□□□ -1.06
HMGB3P24-201ENST00000433260 METP08581 1390 aa8.4□□□□□ -1.06
HMGB3P24-201ENST00000433260 TMEM94Q12767 1356 aa8.4□□□□□ -1.06
HMGB3P24-201ENST00000433260 TMEM132EQ6IEE7 984 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms