RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 TRPM1Q7Z4N2 1603 aa19.61■□□□□ 0.73
DDX56-205ENST00000433257 AEBP2Q6ZN18 517 aaPredicted RBP19.61■□□□□ 0.73
DDX56-205ENST00000433257 PARD3Q8TEW0 1356 aa19.61■□□□□ 0.73
DDX56-205ENST00000433257 ZNF326Q5BKZ1 582 aaKnown RBP19.6■□□□□ 0.73
DDX56-205ENST00000433257 USP35Q9P2H5 1018 aa19.6■□□□□ 0.73
DDX56-205ENST00000433257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.59■□□□□ 0.732e-7■■□□□ 12.3
DDX56-205ENST00000433257 POLR3GLQ9BT43 218 aa19.59■□□□□ 0.73
DDX56-205ENST00000433257 ADAMTSL3P82987 1691 aa19.59■□□□□ 0.73
DDX56-205ENST00000433257 GPRASP1Q5JY77 1395 aa19.58■□□□□ 0.72
DDX56-205ENST00000433257 RCAN3Q9UKA8 241 aa19.58■□□□□ 0.72
DDX56-205ENST00000433257 PLPPR3Q6T4P5 718 aa19.57■□□□□ 0.72
DDX56-205ENST00000433257 MADDQ8WXG6 1647 aa19.56■□□□□ 0.72
DDX56-205ENST00000433257 UNC13BO14795 1591 aa19.56■□□□□ 0.72
DDX56-205ENST00000433257 KANK1Q14678 1352 aa19.55■□□□□ 0.72
DDX56-205ENST00000433257 FAM135AQ9P2D6 1515 aa19.55■□□□□ 0.72
DDX56-205ENST00000433257 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
DDX56-205ENST00000433257 ST20-MTHFSA0A0A6YYL1 179 aa19.54■□□□□ 0.72
DDX56-205ENST00000433257 FER1L4A9Z1Z3 1794 aa19.54■□□□□ 0.72
DDX56-205ENST00000433257 CCDC144AA2RUR9 1427 aa19.53■□□□□ 0.72
DDX56-205ENST00000433257 BLMP54132 1417 aaPredicted RBP19.53■□□□□ 0.72
DDX56-205ENST00000433257 PRDM15P57071 1507 aaPredicted RBP19.53■□□□□ 0.72
DDX56-205ENST00000433257 PTPRMP28827 1452 aa19.52■□□□□ 0.72
DDX56-205ENST00000433257 DDRGK1Q96HY6 314 aa19.52■□□□□ 0.71
DDX56-205ENST00000433257 RIMS1Q86UR5 1692 aaKnown RBP19.51■□□□□ 0.71
DDX56-205ENST00000433257 PPM1GO15355 546 aaPredicted RBP19.51■□□□□ 0.71
DDX56-205ENST00000433257 CEBPAP49715 358 aaPredicted RBP19.51■□□□□ 0.71
DDX56-205ENST00000433257 ZMYM3Q14202 1370 aa19.51■□□□□ 0.71
DDX56-205ENST00000433257 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
DDX56-205ENST00000433257 RNF17Q9BXT8 1623 aaKnown RBP19.5■□□□□ 0.71
DDX56-205ENST00000433257 PAK3O75914 559 aaPredicted RBP19.49■□□□□ 0.71
DDX56-205ENST00000433257 IQGAP3Q86VI3 1631 aa19.48■□□□□ 0.71
DDX56-205ENST00000433257 CLTCQ00610 1675 aaKnown RBP19.47■□□□□ 0.71
DDX56-205ENST00000433257 NBR1Q14596 966 aa19.45■□□□□ 0.7
DDX56-205ENST00000433257 BACH2Q9BYV9 841 aa19.45■□□□□ 0.7
DDX56-205ENST00000433257 DEPDC5O75140 1603 aa19.45■□□□□ 0.7
DDX56-205ENST00000433257 PDE4AP27815 886 aa19.44■□□□□ 0.7
DDX56-205ENST00000433257 MROH1Q8NDA8 1641 aa19.44■□□□□ 0.7
DDX56-205ENST00000433257 EXOC6Q8TAG9 804 aa19.43■□□□□ 0.7
DDX56-205ENST00000433257 STAC3Q96MF2 364 aa19.43■□□□□ 0.7
DDX56-205ENST00000433257 ABCC3O15438 1527 aa19.43■□□□□ 0.7
DDX56-205ENST00000433257 MROH2AA6NES4 1674 aa19.42■□□□□ 0.7
DDX56-205ENST00000433257 PER1O15534 1290 aaPredicted RBP19.42■□□□□ 0.7
DDX56-205ENST00000433257 KDM2AQ9Y2K7 1162 aa19.42■□□□□ 0.7
DDX56-205ENST00000433257 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
DDX56-205ENST00000433257 TMF1P82094 1093 aa19.41■□□□□ 0.7
DDX56-205ENST00000433257 FBXO31Q5XUX0 539 aaPredicted RBP19.4■□□□□ 0.7
DDX56-205ENST00000433257 C3P01024 1663 aa19.39■□□□□ 0.7
DDX56-205ENST00000433257 CDCA8Q53HL2 280 aa19.38■□□□□ 0.69
DDX56-205ENST00000433257 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.38■□□□□ 0.69
DDX56-205ENST00000433257 VWDEQ8N2E2 1590 aa19.38■□□□□ 0.69
DDX56-205ENST00000433257 CEP152O94986 1710 aa19.38■□□□□ 0.69
DDX56-205ENST00000433257 LMTK2Q8IWU2 1503 aa19.37■□□□□ 0.69
DDX56-205ENST00000433257 ARHGAP31Q2M1Z3 1444 aa19.36■□□□□ 0.69
DDX56-205ENST00000433257 EIF3AQ14152 1382 aaKnown RBP19.36■□□□□ 0.69
DDX56-205ENST00000433257 SLC24A1O60721 1099 aa19.36■□□□□ 0.69
DDX56-205ENST00000433257 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
DDX56-205ENST00000433257 NPATQ14207 1427 aa19.36■□□□□ 0.69
DDX56-205ENST00000433257 CAMSAP1Q5T5Y3 1602 aa19.34■□□□□ 0.69
DDX56-205ENST00000433257 NGEFQ8N5V2 710 aa19.33■□□□□ 0.69
DDX56-205ENST00000433257 SETD1BQ9UPS6 1966 aaKnown RBP19.33■□□□□ 0.69
DDX56-205ENST00000433257 SYNMO15061 1565 aa19.33■□□□□ 0.69
DDX56-205ENST00000433257 CENPQQ7L2Z9 268 aaPredicted RBP19.33■□□□□ 0.68
DDX56-205ENST00000433257 TESK2Q96S53 571 aa19.33■□□□□ 0.68
DDX56-205ENST00000433257 NPC1L1Q9UHC9 1359 aa19.32■□□□□ 0.68
DDX56-205ENST00000433257 PLA2R1Q13018 1463 aa19.31■□□□□ 0.68
DDX56-205ENST00000433257 TNRQ92752 1358 aa19.31■□□□□ 0.68
DDX56-205ENST00000433257 EFCAB6Q5THR3 1501 aa19.3■□□□□ 0.68
DDX56-205ENST00000433257 TET3O43151 1660 aa19.3■□□□□ 0.68
DDX56-205ENST00000433257 IQGAP1P46940 1657 aa19.3■□□□□ 0.68
DDX56-205ENST00000433257 CFAP65Q6ZU64 1925 aaKnown RBP19.29■□□□□ 0.68
DDX56-205ENST00000433257 DISP3Q9P2K9 1392 aa19.28■□□□□ 0.68
DDX56-205ENST00000433257 PIK3C2GO75747 1445 aa19.28■□□□□ 0.68
DDX56-205ENST00000433257 ERVK-7P63135 1459 aa19.28■□□□□ 0.68
DDX56-205ENST00000433257 NEFMP07197 916 aa19.27■□□□□ 0.68
DDX56-205ENST00000433257 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
DDX56-205ENST00000433257 PANK3Q9H999 370 aa19.27■□□□□ 0.68
DDX56-205ENST00000433257 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.68
DDX56-205ENST00000433257 DAXXQ9UER7 740 aaPredicted RBP19.27■□□□□ 0.67
DDX56-205ENST00000433257 KIAA1210Q9ULL0 1709 aa19.26■□□□□ 0.67
DDX56-205ENST00000433257 WDR43Q15061 677 aaKnown RBP eCLIP19.26■□□□□ 0.67
DDX56-205ENST00000433257 SPATA31D1Q6ZQQ2 1576 aa19.26■□□□□ 0.67
DDX56-205ENST00000433257 CRBNQ96SW2 442 aa19.25■□□□□ 0.67
DDX56-205ENST00000433257 SLC52A1Q9NWF4 448 aa19.25■□□□□ 0.67
DDX56-205ENST00000433257 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
DDX56-205ENST00000433257 PREX1Q8TCU6 1659 aa19.24■□□□□ 0.67
DDX56-205ENST00000433257 KDM2BQ8NHM5 1336 aa19.24■□□□□ 0.67
DDX56-205ENST00000433257 NINLQ9Y2I6 1382 aa19.24■□□□□ 0.67
DDX56-205ENST00000433257 SPHKAPQ2M3C7 1700 aa19.24■□□□□ 0.67
DDX56-205ENST00000433257 STAG3Q9UJ98 1225 aa19.24■□□□□ 0.67
DDX56-205ENST00000433257 ASXL1Q8IXJ9 1541 aa19.23■□□□□ 0.67
DDX56-205ENST00000433257 NBPF1Q3BBV0 1214 aa19.23■□□□□ 0.67
DDX56-205ENST00000433257 NOS1P29475 1434 aa19.23■□□□□ 0.67
DDX56-205ENST00000433257 NLRP1Q9C000 1473 aa19.23■□□□□ 0.67
DDX56-205ENST00000433257 IDI1Q13907 227 aa19.22■□□□□ 0.67
DDX56-205ENST00000433257 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
DDX56-205ENST00000433257 LMTK3Q96Q04 1460 aa19.21■□□□□ 0.67
DDX56-205ENST00000433257 SCAF11Q99590 1463 aaKnown RBP19.21■□□□□ 0.67
DDX56-205ENST00000433257 HSPA2P54652 639 aa19.21■□□□□ 0.67
DDX56-205ENST00000433257 GOLGA2Q08379 1002 aa19.21■□□□□ 0.67
DDX56-205ENST00000433257 FAM161AQ3B820 660 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms