RNA–Protein interactions for RNA: ENST00000430149.2

CDKN1C-203, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-203ENST00000430149 ZFYVE9O95405 1425 aa29.17■■■□□ 2.26
CDKN1C-203ENST00000430149 TXNDC2Q86VQ3 553 aa29.16■■■□□ 2.26
CDKN1C-203ENST00000430149 STRCQ7RTU9 1775 aa29.14■■■□□ 2.26
CDKN1C-203ENST00000430149 ANKLE2Q86XL3 938 aa29.14■■■□□ 2.26
CDKN1C-203ENST00000430149 NEXMIFQ5QGS0 1516 aa29.12■■■□□ 2.25
CDKN1C-203ENST00000430149 EID1Q9Y6B2 187 aa29.11■■■□□ 2.25
CDKN1C-203ENST00000430149 SCAF11Q99590 1463 aaKnown RBP29.1■■■□□ 2.25
CDKN1C-203ENST00000430149 CLSPNQ9HAW4 1339 aa29.1■■■□□ 2.25
CDKN1C-203ENST00000430149 NEURL4Q96JN8 1562 aa29.1■■■□□ 2.25
CDKN1C-203ENST00000430149 PPP1R15AO75807 674 aaPredicted RBP29.08■■■□□ 2.25
CDKN1C-203ENST00000430149 POLR1AO95602 1720 aaPredicted RBP29.06■■■□□ 2.24
CDKN1C-203ENST00000430149 RPGRIP1LQ68CZ1 1315 aa29.06■■■□□ 2.24
CDKN1C-203ENST00000430149 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.05■■■□□ 2.24
CDKN1C-203ENST00000430149 PPLO60437 1756 aa29.04■■■□□ 2.24
CDKN1C-203ENST00000430149 KDM2AQ9Y2K7 1162 aa29.04■■■□□ 2.24
CDKN1C-203ENST00000430149 ADGRF5Q8IZF2 1346 aa29.03■■■□□ 2.24
CDKN1C-203ENST00000430149 DCAF11Q8TEB1 546 aa29.03■■■□□ 2.24
CDKN1C-203ENST00000430149 NPHP4O75161 1426 aaPredicted RBP29.02■■■□□ 2.24
CDKN1C-203ENST00000430149 HDGFP51858 240 aaKnown RBP29.02■■■□□ 2.24
CDKN1C-203ENST00000430149 L3MBTL2Q969R5 705 aa29.02■■■□□ 2.24
CDKN1C-203ENST00000430149 IFT172Q9UG01 1749 aa29.01■■■□□ 2.24
CDKN1C-203ENST00000430149 MED14O60244 1454 aa29.01■■■□□ 2.23
CDKN1C-203ENST00000430149 BCANQ96GW7 911 aa29■■■□□ 2.23
CDKN1C-203ENST00000430149 PLEKHG1Q9ULL1 1385 aa28.99■■■□□ 2.23
CDKN1C-203ENST00000430149 VGFO15240 615 aaPredicted RBP28.98■■■□□ 2.23
CDKN1C-203ENST00000430149 SLC26A8Q96RN1 970 aa28.97■■■□□ 2.23
CDKN1C-203ENST00000430149 IQGAP1P46940 1657 aa28.96■■■□□ 2.23
CDKN1C-203ENST00000430149 TONSLQ96HA7 1378 aa28.93■■■□□ 2.22
CDKN1C-203ENST00000430149 ADAMTS13Q76LX8 1427 aa28.92■■■□□ 2.22
CDKN1C-203ENST00000430149 MYOM2P54296 1465 aa28.92■■■□□ 2.22
CDKN1C-203ENST00000430149 NRXN3Q9Y4C0 1643 aa28.92■■■□□ 2.22
CDKN1C-203ENST00000430149 DMRT2Q9Y5R5 561 aa28.91■■■□□ 2.22
CDKN1C-203ENST00000430149 NRXN1Q9ULB1 1477 aa28.89■■■□□ 2.22
CDKN1C-203ENST00000430149 SETBP1Q9Y6X0 1596 aa28.89■■■□□ 2.21
CDKN1C-203ENST00000430149 PIK3C2GO75747 1445 aa28.88■■■□□ 2.21
CDKN1C-203ENST00000430149 CFAP70Q5T0N1 1121 aa28.84■■■□□ 2.21
CDKN1C-203ENST00000430149 TBX22Q9Y458 520 aa28.84■■■□□ 2.21
CDKN1C-203ENST00000430149 ALKQ9UM73 1620 aa28.83■■■□□ 2.21
CDKN1C-203ENST00000430149 METP08581 1390 aa28.82■■■□□ 2.2
CDKN1C-203ENST00000430149 ZEB1P37275 1124 aaPredicted RBP28.82■■■□□ 2.2
CDKN1C-203ENST00000430149 ZNF335Q9H4Z2 1342 aaPredicted RBP28.81■■■□□ 2.2
CDKN1C-203ENST00000430149 PRAG1Q86YV5 1406 aa28.81■■■□□ 2.2
CDKN1C-203ENST00000430149 NBPF8Q3BBV2 869 aa28.81■■■□□ 2.2
CDKN1C-203ENST00000430149 STAC3Q96MF2 364 aa28.81■■■□□ 2.2
CDKN1C-203ENST00000430149 C14orf93Q9H972 538 aaKnown RBP28.79■■■□□ 2.2
CDKN1C-203ENST00000430149 SETD1AO15047 1707 aaKnown RBP28.79■■■□□ 2.2
CDKN1C-203ENST00000430149 TMEM132EQ6IEE7 984 aa28.79■■■□□ 2.2
CDKN1C-203ENST00000430149 DIP2AQ14689 1571 aa28.76■■■□□ 2.19
CDKN1C-203ENST00000430149 PTPRUQ92729 1446 aa28.76■■■□□ 2.19
CDKN1C-203ENST00000430149 ASXL1Q8IXJ9 1541 aa28.75■■■□□ 2.19
CDKN1C-203ENST00000430149 NBPF1Q3BBV0 1214 aa28.74■■■□□ 2.19
CDKN1C-203ENST00000430149 TIMELESSQ9UNS1 1208 aa28.73■■■□□ 2.19
CDKN1C-203ENST00000430149 STRCP1A6NGW2 1772 aa28.73■■■□□ 2.19
CDKN1C-203ENST00000430149 KCNA6P17658 529 aa28.7■■■□□ 2.18
CDKN1C-203ENST00000430149 AMOTL2Q9Y2J4 779 aa28.7■■■□□ 2.18
CDKN1C-203ENST00000430149 STK26Q9P289 416 aa28.68■■■□□ 2.18
CDKN1C-203ENST00000430149 CHD2O14647 1828 aaKnown RBP28.68■■■□□ 2.18
CDKN1C-203ENST00000430149 PIK3R4Q99570 1358 aa28.67■■■□□ 2.18
CDKN1C-203ENST00000430149 ADGRB1O14514 1584 aa28.67■■■□□ 2.18
CDKN1C-203ENST00000430149 LAMC1P11047 1609 aa28.67■■■□□ 2.18
CDKN1C-203ENST00000430149 RBM33Q96EV2 1170 aaKnown RBP28.66■■■□□ 2.18
CDKN1C-203ENST00000430149 LTBP4Q8N2S1 1624 aa28.65■■■□□ 2.18
CDKN1C-203ENST00000430149 TRPM1Q7Z4N2 1603 aa28.65■■■□□ 2.18
CDKN1C-203ENST00000430149 NWD1Q149M9 1564 aa28.64■■■□□ 2.18
CDKN1C-203ENST00000430149 YTHDC2Q9H6S0 1430 aaKnown RBP28.62■■■□□ 2.17
CDKN1C-203ENST00000430149 XRN1Q8IZH2 1706 aaKnown RBP28.62■■■□□ 2.17
CDKN1C-203ENST00000430149 KIAA1210Q9ULL0 1709 aa28.62■■■□□ 2.17
CDKN1C-203ENST00000430149 LRPPRCP42704 1394 aaKnown RBP28.61■■■□□ 2.17
CDKN1C-203ENST00000430149 ROBO2Q9HCK4 1378 aa28.59■■■□□ 2.17
CDKN1C-203ENST00000430149 ROCK2O75116 1388 aaKnown RBP28.58■■■□□ 2.17
CDKN1C-203ENST00000430149 TRAK1Q9UPV9 953 aa28.58■■■□□ 2.17
CDKN1C-203ENST00000430149 PROSER2Q86WR7 435 aaPredicted RBP28.58■■■□□ 2.17
CDKN1C-203ENST00000430149 RALGAPBQ86X10 1494 aa28.57■■■□□ 2.16
CDKN1C-203ENST00000430149 ABCC11Q96J66 1382 aa28.56■■■□□ 2.16
CDKN1C-203ENST00000430149 LRRC7Q96NW7 1537 aa28.56■■■□□ 2.16
CDKN1C-203ENST00000430149 WAPLQ7Z5K2 1190 aa28.55■■■□□ 2.16
CDKN1C-203ENST00000430149 NKTRP30414 1462 aaKnown RBP28.55■■■□□ 2.16
CDKN1C-203ENST00000430149 CPS1P31327 1500 aa28.54■■■□□ 2.16
CDKN1C-203ENST00000430149 PLEKHH1Q9ULM0 1364 aa28.53■■■□□ 2.16
CDKN1C-203ENST00000430149 TECPR2O15040 1411 aa28.53■■■□□ 2.16
CDKN1C-203ENST00000430149 TMEM94Q12767 1356 aa28.52■■■□□ 2.16
CDKN1C-203ENST00000430149 GPRASP1Q5JY77 1395 aa28.52■■■□□ 2.16
CDKN1C-203ENST00000430149 CARD11Q9BXL7 1154 aa28.51■■■□□ 2.15
CDKN1C-203ENST00000430149 PTCH1Q13635 1447 aa28.51■■■□□ 2.15
CDKN1C-203ENST00000430149 KNDC1Q76NI1 1749 aa28.49■■■□□ 2.15
CDKN1C-203ENST00000430149 SAFB2Q14151 953 aaKnown RBP eCLIP28.49■■■□□ 2.15
CDKN1C-203ENST00000430149 PRAM1Q96QH2 718 aa28.49■■■□□ 2.15
CDKN1C-203ENST00000430149 XIRP1Q702N8 1843 aaKnown RBP28.48■■■□□ 2.15
CDKN1C-203ENST00000430149 CERKQ8TCT0 537 aa28.45■■■□□ 2.15
CDKN1C-203ENST00000430149 DLC1Q96QB1 1528 aa28.45■■■□□ 2.15
CDKN1C-203ENST00000430149 ARHGEF28Q8N1W1 1705 aaKnown RBP28.44■■■□□ 2.14
CDKN1C-203ENST00000430149 SIRT1Q96EB6 747 aa28.43■■■□□ 2.14
CDKN1C-203ENST00000430149 POGKQ9P215 609 aa28.43■■■□□ 2.14
CDKN1C-203ENST00000430149 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
CDKN1C-203ENST00000430149 C14orf37Q86TY3 774 aa28.42■■■□□ 2.14
CDKN1C-203ENST00000430149 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.4■■■□□ 2.14
CDKN1C-203ENST00000430149 MINK1Q8N4C8 1332 aaPredicted RBP28.37■■■□□ 2.13
CDKN1C-203ENST00000430149 NALCNQ8IZF0 1738 aa28.37■■■□□ 2.13
CDKN1C-203ENST00000430149 HIRIP3Q9BW71 556 aaPredicted RBP28.37■■■□□ 2.13
CDKN1C-203ENST00000430149 ADGRL3Q9HAR2 1447 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms