RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ADGRF5Q8IZF2 1346 aa20.93■□□□□ 0.94
PKP4-205ENST00000426248 USP35Q9P2H5 1018 aa20.92■□□□□ 0.94
PKP4-205ENST00000426248 SLC4A3P48751 1232 aa20.9■□□□□ 0.94
PKP4-205ENST00000426248 CFAP65Q6ZU64 1925 aaKnown RBP20.9■□□□□ 0.94
PKP4-205ENST00000426248 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.94
PKP4-205ENST00000426248 C14orf37Q86TY3 774 aa20.89■□□□□ 0.93
PKP4-205ENST00000426248 PLEKHG5O94827 1062 aa20.89■□□□□ 0.93
PKP4-205ENST00000426248 PANK3Q9H999 370 aa20.89■□□□□ 0.93
PKP4-205ENST00000426248 EID1Q9Y6B2 187 aa20.88■□□□□ 0.93
PKP4-205ENST00000426248 EIF3AQ14152 1382 aaKnown RBP20.87■□□□□ 0.93
PKP4-205ENST00000426248 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
PKP4-205ENST00000426248 NUTM2FA1L443 756 aa20.87■□□□□ 0.93
PKP4-205ENST00000426248 MINK1Q8N4C8 1332 aaPredicted RBP20.86■□□□□ 0.93
PKP4-205ENST00000426248 FRAT1Q92837 279 aaPredicted RBP20.86■□□□□ 0.93
PKP4-205ENST00000426248 ZFYVE16Q7Z3T8 1539 aa20.85■□□□□ 0.93
PKP4-205ENST00000426248 ZMYND15Q9H091 742 aa20.85■□□□□ 0.93
PKP4-205ENST00000426248 ARAP3Q8WWN8 1544 aa20.84■□□□□ 0.93
PKP4-205ENST00000426248 PRKRIP1Q9H875 184 aaPredicted RBP20.83■□□□□ 0.93
PKP4-205ENST00000426248 SLC24A1O60721 1099 aa20.82■□□□□ 0.92
PKP4-205ENST00000426248 CENPJQ9HC77 1338 aaPredicted RBP20.82■□□□□ 0.92
PKP4-205ENST00000426248 MLH3Q9UHC1 1453 aa20.81■□□□□ 0.92
PKP4-205ENST00000426248 CROCC2H7BZ55 1655 aa20.8■□□□□ 0.92
PKP4-205ENST00000426248 NOS1P29475 1434 aa20.8■□□□□ 0.92
PKP4-205ENST00000426248 WDR43Q15061 677 aaKnown RBP eCLIP20.8■□□□□ 0.92
PKP4-205ENST00000426248 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
PKP4-205ENST00000426248 ATP10AO60312 1499 aa20.79■□□□□ 0.92
PKP4-205ENST00000426248 TXNDC2Q86VQ3 553 aa20.79■□□□□ 0.92
PKP4-205ENST00000426248 MAST1Q9Y2H9 1570 aa20.78■□□□□ 0.92
PKP4-205ENST00000426248 HSP90AA2PQ14568 343 aaPredicted RBP20.78■□□□□ 0.92
PKP4-205ENST00000426248 DDRGK1Q96HY6 314 aa20.77■□□□□ 0.92
PKP4-205ENST00000426248 DNAJC5Q9H3Z4 198 aa20.77■□□□□ 0.92
PKP4-205ENST00000426248 SLC26A8Q96RN1 970 aa20.77■□□□□ 0.92
PKP4-205ENST00000426248 A0A0U1RQG5 324 aaPredicted RBP20.76■□□□□ 0.91
PKP4-205ENST00000426248 PDE4AP27815 886 aa20.76■□□□□ 0.91
PKP4-205ENST00000426248 NFKBIBQ15653 356 aa20.76■□□□□ 0.91
PKP4-205ENST00000426248 CFAP74Q9C0B2 1584 aa20.76■□□□□ 0.91
PKP4-205ENST00000426248 KTN1Q86UP2 1357 aaKnown RBP20.75■□□□□ 0.91
PKP4-205ENST00000426248 PLA2R1Q13018 1463 aa20.75■□□□□ 0.91
PKP4-205ENST00000426248 NPATQ14207 1427 aa20.75■□□□□ 0.91
PKP4-205ENST00000426248 RPGRIP1LQ68CZ1 1315 aa20.74■□□□□ 0.91
PKP4-205ENST00000426248 PRAG1Q86YV5 1406 aa20.74■□□□□ 0.91
PKP4-205ENST00000426248 CABP2Q9NPB3 220 aa20.74■□□□□ 0.91
PKP4-205ENST00000426248 PLXNC1O60486 1568 aa20.74■□□□□ 0.91
PKP4-205ENST00000426248 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.73■□□□□ 0.91
PKP4-205ENST00000426248 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
PKP4-205ENST00000426248 CNTLNQ9NXG0 1405 aa20.73■□□□□ 0.91
PKP4-205ENST00000426248 HSP90AA1P07900 732 aaKnown RBP20.72■□□□□ 0.91
PKP4-205ENST00000426248 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
PKP4-205ENST00000426248 HECW2Q9P2P5 1572 aa20.72■□□□□ 0.91
PKP4-205ENST00000426248 SOX12O15370 315 aa20.71■□□□□ 0.91
PKP4-205ENST00000426248 MORC1Q86VD1 984 aa20.71■□□□□ 0.91
PKP4-205ENST00000426248 EVC2Q86UK5 1308 aa20.7■□□□□ 0.9
PKP4-205ENST00000426248 UGGT1Q9NYU2 1555 aa20.7■□□□□ 0.9
PKP4-205ENST00000426248 ZMYM3Q14202 1370 aa20.7■□□□□ 0.9
PKP4-205ENST00000426248 RALBP1Q15311 655 aa20.68■□□□□ 0.9
PKP4-205ENST00000426248 SLC12A5Q9H2X9 1139 aa20.68■□□□□ 0.9
PKP4-205ENST00000426248 PNNQ9H307 717 aaKnown RBP20.67■□□□□ 0.9
PKP4-205ENST00000426248 C14orf93Q9H972 538 aaKnown RBP20.66■□□□□ 0.9
PKP4-205ENST00000426248 TCERG1O14776 1098 aaKnown RBP20.66■□□□□ 0.9
PKP4-205ENST00000426248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.66■□□□□ 0.98e-7■■■□□ 15.7
PKP4-205ENST00000426248 THEMISQ8N1K5 641 aaPredicted RBP20.66■□□□□ 0.9
PKP4-205ENST00000426248 WAPLQ7Z5K2 1190 aa20.66■□□□□ 0.9
PKP4-205ENST00000426248 ZBED9Q6R2W3 1325 aa20.65■□□□□ 0.9
PKP4-205ENST00000426248 RALGAPBQ86X10 1494 aa20.65■□□□□ 0.9
PKP4-205ENST00000426248 HDGFL2Q7Z4V5 671 aaPredicted RBP20.65■□□□□ 0.9
PKP4-205ENST00000426248 NEUROD2Q15784 382 aa20.64■□□□□ 0.89
PKP4-205ENST00000426248 FAM43AQ8N2R8 423 aa20.64■□□□□ 0.89
PKP4-205ENST00000426248 ZBTB7CA1YPR0 619 aa20.64■□□□□ 0.89
PKP4-205ENST00000426248 KDM5DQ9BY66 1539 aa20.64■□□□□ 0.89
PKP4-205ENST00000426248 LMOD2Q6P5Q4 547 aa20.63■□□□□ 0.89
PKP4-205ENST00000426248 TNRQ92752 1358 aa20.62■□□□□ 0.89
PKP4-205ENST00000426248 NLRP13Q86W25 1043 aa20.62■□□□□ 0.89
PKP4-205ENST00000426248 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
PKP4-205ENST00000426248 DISP3Q9P2K9 1392 aa20.62■□□□□ 0.89
PKP4-205ENST00000426248 DIP2BQ9P265 1576 aa20.62■□□□□ 0.89
PKP4-205ENST00000426248 TERF2IPQ9NYB0 399 aa20.61■□□□□ 0.89
PKP4-205ENST00000426248 PRDM15P57071 1507 aaPredicted RBP20.6■□□□□ 0.89
PKP4-205ENST00000426248 FRAT2O75474 233 aaPredicted RBP20.6■□□□□ 0.89
PKP4-205ENST00000426248 KIDINS220Q9ULH0 1771 aa20.59■□□□□ 0.89
PKP4-205ENST00000426248 EXOC6Q8TAG9 804 aa20.59■□□□□ 0.89
PKP4-205ENST00000426248 COL17A1Q9UMD9 1497 aaPredicted RBP20.59■□□□□ 0.89
PKP4-205ENST00000426248 CFAP53Q96M91 514 aa20.59■□□□□ 0.89
PKP4-205ENST00000426248 TESK2Q96S53 571 aa20.59■□□□□ 0.89
PKP4-205ENST00000426248 UHRF1BP1Q6BDS2 1440 aa20.59■□□□□ 0.89
PKP4-205ENST00000426248 U2SURPO15042 1029 aaKnown RBP20.59■□□□□ 0.89
PKP4-205ENST00000426248 MYBBP1AQ9BQG0 1328 aaKnown RBP20.59■□□□□ 0.89
PKP4-205ENST00000426248 INO80Q9ULG1 1556 aaPredicted RBP20.59■□□□□ 0.89
PKP4-205ENST00000426248 IQGAP3Q86VI3 1631 aa20.58■□□□□ 0.89
PKP4-205ENST00000426248 MAGI2Q86UL8 1455 aa20.58■□□□□ 0.89
PKP4-205ENST00000426248 UNC13BO14795 1591 aa20.58■□□□□ 0.88
PKP4-205ENST00000426248 SPATA31E1Q6ZUB1 1445 aa20.57■□□□□ 0.88
PKP4-205ENST00000426248 SCAF11Q99590 1463 aaKnown RBP20.56■□□□□ 0.88
PKP4-205ENST00000426248 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
PKP4-205ENST00000426248 PTPRTO14522 1441 aa20.55■□□□□ 0.88
PKP4-205ENST00000426248 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
PKP4-205ENST00000426248 CDK19Q9BWU1 502 aa20.55■□□□□ 0.88
PKP4-205ENST00000426248 NGDNQ8NEJ9 315 aaKnown RBP20.54■□□□□ 0.88
PKP4-205ENST00000426248 ABCC3O15438 1527 aa20.54■□□□□ 0.88
PKP4-205ENST00000426248 GGNBP2Q9H3C7 697 aa20.53■□□□□ 0.88
PKP4-205ENST00000426248 CABP1Q9NZU7 370 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms