RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 TRPM2O94759 1503 aa14.6□□□□□ -0.07
DDX56-203ENST00000421223 SMG6Q86US8 1419 aaKnown RBP14.59□□□□□ -0.07
DDX56-203ENST00000421223 SCAF11Q99590 1463 aaKnown RBP14.58□□□□□ -0.07
DDX56-203ENST00000421223 EIF2AK4Q9P2K8 1649 aaKnown RBP14.58□□□□□ -0.07
DDX56-203ENST00000421223 PPP2R1AP30153 589 aa14.58□□□□□ -0.07
DDX56-203ENST00000421223 NOS1P29475 1434 aa14.58□□□□□ -0.07
DDX56-203ENST00000421223 INO80Q9ULG1 1556 aaPredicted RBP14.58□□□□□ -0.08
DDX56-203ENST00000421223 CCDC146Q8IYE0 955 aa14.58□□□□□ -0.08
DDX56-203ENST00000421223 EIF3AQ14152 1382 aaKnown RBP14.58□□□□□ -0.08
DDX56-203ENST00000421223 STAC3Q96MF2 364 aa14.58□□□□□ -0.08
DDX56-203ENST00000421223 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
DDX56-203ENST00000421223 RCAN3Q9UKA8 241 aa14.56□□□□□ -0.08
DDX56-203ENST00000421223 SPHKAPQ2M3C7 1700 aa14.56□□□□□ -0.08
DDX56-203ENST00000421223 POGZQ7Z3K3 1410 aa14.56□□□□□ -0.08
DDX56-203ENST00000421223 PLIN1O60240 522 aa14.55□□□□□ -0.08
DDX56-203ENST00000421223 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
DDX56-203ENST00000421223 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
DDX56-203ENST00000421223 KIDINS220Q9ULH0 1771 aa14.55□□□□□ -0.08
DDX56-203ENST00000421223 TET3O43151 1660 aa14.55□□□□□ -0.08
DDX56-203ENST00000421223 ERICH6BQ5W0A0 696 aa14.55□□□□□ -0.08
DDX56-203ENST00000421223 SLC12A5Q9H2X9 1139 aa14.55□□□□□ -0.08
DDX56-203ENST00000421223 NPATQ14207 1427 aa14.54□□□□□ -0.08
DDX56-203ENST00000421223 CENPJQ9HC77 1338 aaPredicted RBP14.54□□□□□ -0.08
DDX56-203ENST00000421223 MADDQ8WXG6 1647 aa14.54□□□□□ -0.08
DDX56-203ENST00000421223 IDI1Q13907 227 aa14.53□□□□□ -0.08
DDX56-203ENST00000421223 FBXO31Q5XUX0 539 aaPredicted RBP14.53□□□□□ -0.08
DDX56-203ENST00000421223 CARD14Q9BXL6 1004 aa14.52□□□□□ -0.08
DDX56-203ENST00000421223 EXOC6Q8TAG9 804 aa14.52□□□□□ -0.09
DDX56-203ENST00000421223 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
DDX56-203ENST00000421223 DEPDC5O75140 1603 aa14.5□□□□□ -0.09
DDX56-203ENST00000421223 YEATS2Q9ULM3 1422 aa14.5□□□□□ -0.09
DDX56-203ENST00000421223 RRP1P56182 461 aaKnown RBP14.5□□□□□ -0.09
DDX56-203ENST00000421223 MROH1Q8NDA8 1641 aa14.5□□□□□ -0.09
DDX56-203ENST00000421223 EFCAB6Q5THR3 1501 aa14.49□□□□□ -0.09
DDX56-203ENST00000421223 CEP152O94986 1710 aa14.49□□□□□ -0.09
DDX56-203ENST00000421223 VGFO15240 615 aaPredicted RBP14.49□□□□□ -0.09
DDX56-203ENST00000421223 ANP32EQ9BTT0 268 aa14.49□□□□□ -0.09
DDX56-203ENST00000421223 C14orf93Q9H972 538 aaKnown RBP14.49□□□□□ -0.09
DDX56-203ENST00000421223 PPRC1Q5VV67 1664 aaKnown RBP14.49□□□□□ -0.09
DDX56-203ENST00000421223 MORC1Q86VD1 984 aa14.48□□□□□ -0.09
DDX56-203ENST00000421223 CABP2Q9NPB3 220 aa14.48□□□□□ -0.09
DDX56-203ENST00000421223 VWDEQ8N2E2 1590 aa14.48□□□□□ -0.09
DDX56-203ENST00000421223 MLH3Q9UHC1 1453 aa14.48□□□□□ -0.09
DDX56-203ENST00000421223 APAF1O14727 1248 aa14.47□□□□□ -0.09
DDX56-203ENST00000421223 EIF5BO60841 1220 aaKnown RBP14.47□□□□□ -0.09
DDX56-203ENST00000421223 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
DDX56-203ENST00000421223 RNF17Q9BXT8 1623 aaKnown RBP14.47□□□□□ -0.09
DDX56-203ENST00000421223 PDE3BQ13370 1112 aa14.47□□□□□ -0.09
DDX56-203ENST00000421223 LAMC1P11047 1609 aa14.46□□□□□ -0.09
DDX56-203ENST00000421223 SRPK2P78362 688 aaKnown RBP14.46□□□□□ -0.09
DDX56-203ENST00000421223 POGKQ9P215 609 aa14.45□□□□□ -0.1
DDX56-203ENST00000421223 HECW2Q9P2P5 1572 aa14.45□□□□□ -0.1
DDX56-203ENST00000421223 KIF1BO60333 1816 aa14.44□□□□□ -0.1
DDX56-203ENST00000421223 MINK1Q8N4C8 1332 aaPredicted RBP14.44□□□□□ -0.1
DDX56-203ENST00000421223 FRMPD1Q5SYB0 1578 aa14.44□□□□□ -0.1
DDX56-203ENST00000421223 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
DDX56-203ENST00000421223 MAP3K4Q9Y6R4 1608 aa14.43□□□□□ -0.1
DDX56-203ENST00000421223 RRP7AQ9Y3A4 280 aaKnown RBP14.43□□□□□ -0.1
DDX56-203ENST00000421223 ABCA6Q8N139 1617 aa14.43□□□□□ -0.1
DDX56-203ENST00000421223 RNF123Q5XPI4 1314 aa14.43□□□□□ -0.1
DDX56-203ENST00000421223 ASXL1Q8IXJ9 1541 aa14.42□□□□□ -0.1
DDX56-203ENST00000421223 IQGAP1P46940 1657 aa14.42□□□□□ -0.1
DDX56-203ENST00000421223 NEO1Q92859 1461 aa14.42□□□□□ -0.1
DDX56-203ENST00000421223 MROH2AA6NES4 1674 aa14.42□□□□□ -0.1
DDX56-203ENST00000421223 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
DDX56-203ENST00000421223 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
DDX56-203ENST00000421223 ESF1Q9H501 851 aaKnown RBP14.41□□□□□ -0.1
DDX56-203ENST00000421223 PLEKHH1Q9ULM0 1364 aa14.41□□□□□ -0.1
DDX56-203ENST00000421223 ABCC3O15438 1527 aa14.41□□□□□ -0.1
DDX56-203ENST00000421223 NSD3Q9BZ95 1437 aa14.41□□□□□ -0.1
DDX56-203ENST00000421223 MYOM2P54296 1465 aa14.41□□□□□ -0.1
DDX56-203ENST00000421223 C20orf194Q5TEA3 1177 aa14.4□□□□□ -0.1
DDX56-203ENST00000421223 CRBNQ96SW2 442 aa14.4□□□□□ -0.1
DDX56-203ENST00000421223 SLC52A1Q9NWF4 448 aa14.4□□□□□ -0.1
DDX56-203ENST00000421223 EVC2Q86UK5 1308 aa14.4□□□□□ -0.1
DDX56-203ENST00000421223 PRAM1Q96QH2 718 aa14.39□□□□□ -0.11
DDX56-203ENST00000421223 CFAP74Q9C0B2 1584 aa14.39□□□□□ -0.11
DDX56-203ENST00000421223 MTHFSP49914 203 aa14.39□□□□□ -0.11
DDX56-203ENST00000421223 SKAP1Q86WV1 359 aa14.39□□□□□ -0.11
DDX56-203ENST00000421223 LMTK2Q8IWU2 1503 aa14.38□□□□□ -0.11
DDX56-203ENST00000421223 SPINK5Q9NQ38 1064 aaPredicted RBP14.38□□□□□ -0.11
DDX56-203ENST00000421223 PIK3C2GO75747 1445 aa14.38□□□□□ -0.11
DDX56-203ENST00000421223 TSPOAP1O95153 1857 aa14.37□□□□□ -0.11
DDX56-203ENST00000421223 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
DDX56-203ENST00000421223 GGNBP2Q9H3C7 697 aa14.37□□□□□ -0.11
DDX56-203ENST00000421223 BLMP54132 1417 aaPredicted RBP14.37□□□□□ -0.11
DDX56-203ENST00000421223 ADGRB3O60242 1522 aa14.37□□□□□ -0.11
DDX56-203ENST00000421223 DUSP27Q5VZP5 1158 aa14.36□□□□□ -0.11
DDX56-203ENST00000421223 SYNMO15061 1565 aa14.36□□□□□ -0.11
DDX56-203ENST00000421223 FANCIQ9NVI1 1328 aa14.36□□□□□ -0.11
DDX56-203ENST00000421223 MSH5O43196 834 aa14.36□□□□□ -0.11
DDX56-203ENST00000421223 KDM5AP29375 1690 aaKnown RBP14.35□□□□□ -0.11
DDX56-203ENST00000421223 CGNL1Q0VF96 1302 aa14.35□□□□□ -0.11
DDX56-203ENST00000421223 NPM2Q86SE8 214 aaKnown RBP14.35□□□□□ -0.11
DDX56-203ENST00000421223 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
DDX56-203ENST00000421223 DIP2CQ9Y2E4 1556 aa14.35□□□□□ -0.11
DDX56-203ENST00000421223 PPM1GO15355 546 aaPredicted RBP14.35□□□□□ -0.11
DDX56-203ENST00000421223 U2SURPO15042 1029 aaKnown RBP14.34□□□□□ -0.11
DDX56-203ENST00000421223 WAPLQ7Z5K2 1190 aa14.34□□□□□ -0.11
DDX56-203ENST00000421223 U2AF1L5P0DN76 240 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms