RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ANKLE2Q86XL3 938 aa44.58■■■■■ 4.73
CSNK1E-206ENST00000413574 TXNDC2Q86VQ3 553 aa44.57■■■■■ 4.73
CSNK1E-206ENST00000413574 NEUROD1Q13562 356 aa44.54■■■■■ 4.72
CSNK1E-206ENST00000413574 NEXMIFQ5QGS0 1516 aa44.54■■■■■ 4.72
CSNK1E-206ENST00000413574 SCAF11Q99590 1463 aaKnown RBP44.53■■■■■ 4.72
CSNK1E-206ENST00000413574 NEURL4Q96JN8 1562 aa44.53■■■■■ 4.72
CSNK1E-206ENST00000413574 EID1Q9Y6B2 187 aa44.53■■■■■ 4.72
CSNK1E-206ENST00000413574 CCER1Q8TC90 406 aaPredicted RBP44.52■■■■■ 4.72
CSNK1E-206ENST00000413574 SENP3Q9H4L4 574 aaPredicted RBP44.5■■■■■ 4.71
CSNK1E-206ENST00000413574 PPLO60437 1756 aa44.49■■■■■ 4.71
CSNK1E-206ENST00000413574 IFT172Q9UG01 1749 aa44.46■■■■■ 4.71
CSNK1E-206ENST00000413574 PPP1R15AO75807 674 aaPredicted RBP44.45■■■■■ 4.71
CSNK1E-206ENST00000413574 HDGFP51858 240 aaKnown RBP44.43■■■■■ 4.7
CSNK1E-206ENST00000413574 ABCF1Q8NE71 845 aaKnown RBP eCLIP44.43■■■■■ 4.7
CSNK1E-206ENST00000413574 RPGRIP1LQ68CZ1 1315 aa44.42■■■■■ 4.7
CSNK1E-206ENST00000413574 MED14O60244 1454 aa44.41■■■■■ 4.7
CSNK1E-206ENST00000413574 NPHP4O75161 1426 aaPredicted RBP44.4■■■■■ 4.7
CSNK1E-206ENST00000413574 IQGAP1P46940 1657 aa44.39■■■■■ 4.7
CSNK1E-206ENST00000413574 PLEKHG1Q9ULL1 1385 aa44.33■■■■■ 4.69
CSNK1E-206ENST00000413574 BCANQ96GW7 911 aa44.32■■■■■ 4.69
CSNK1E-206ENST00000413574 CLSPNQ9HAW4 1339 aa44.32■■■■■ 4.69
CSNK1E-206ENST00000413574 VGFO15240 615 aaPredicted RBP44.32■■■■■ 4.68
CSNK1E-206ENST00000413574 DCAF11Q8TEB1 546 aa44.32■■■■■ 4.68
CSNK1E-206ENST00000413574 ADGRF5Q8IZF2 1346 aa44.3■■■■■ 4.68
CSNK1E-206ENST00000413574 DMRT2Q9Y5R5 561 aa44.3■■■■■ 4.68
CSNK1E-206ENST00000413574 KDM2AQ9Y2K7 1162 aa44.29■■■■■ 4.68
CSNK1E-206ENST00000413574 L3MBTL2Q969R5 705 aa44.27■■■■■ 4.68
CSNK1E-206ENST00000413574 SLC26A8Q96RN1 970 aa44.26■■■■■ 4.68
CSNK1E-206ENST00000413574 NRXN3Q9Y4C0 1643 aa44.26■■■■■ 4.68
CSNK1E-206ENST00000413574 MYOM2P54296 1465 aa44.22■■■■■ 4.67
CSNK1E-206ENST00000413574 SETBP1Q9Y6X0 1596 aa44.21■■■■■ 4.67
CSNK1E-206ENST00000413574 ADAMTS13Q76LX8 1427 aa44.19■■■■■ 4.67
CSNK1E-206ENST00000413574 TONSLQ96HA7 1378 aa44.18■■■■■ 4.66
CSNK1E-206ENST00000413574 NRXN1Q9ULB1 1477 aa44.15■■■■■ 4.66
CSNK1E-206ENST00000413574 PIK3C2GO75747 1445 aa44.14■■■■■ 4.66
CSNK1E-206ENST00000413574 ALKQ9UM73 1620 aa44.1■■■■■ 4.65
CSNK1E-206ENST00000413574 TBX22Q9Y458 520 aa44.09■■■■■ 4.65
CSNK1E-206ENST00000413574 SETD1AO15047 1707 aaKnown RBP44.09■■■■■ 4.65
CSNK1E-206ENST00000413574 DIP2AQ14689 1571 aa44.07■■■■■ 4.65
CSNK1E-206ENST00000413574 STAC3Q96MF2 364 aa44.07■■■■■ 4.65
CSNK1E-206ENST00000413574 ZNF335Q9H4Z2 1342 aaPredicted RBP44.05■■■■■ 4.64
CSNK1E-206ENST00000413574 METP08581 1390 aa44.02■■■■■ 4.64
CSNK1E-206ENST00000413574 CFAP70Q5T0N1 1121 aa44.02■■■■■ 4.64
CSNK1E-206ENST00000413574 STRCP1A6NGW2 1772 aa44.01■■■■■ 4.64
CSNK1E-206ENST00000413574 PRAG1Q86YV5 1406 aa44■■■■■ 4.63
CSNK1E-206ENST00000413574 C14orf93Q9H972 538 aaKnown RBP43.99■■■■■ 4.63
CSNK1E-206ENST00000413574 CHD2O14647 1828 aaKnown RBP43.98■■■■■ 4.63
CSNK1E-206ENST00000413574 LAMC1P11047 1609 aa43.94■■■■■ 4.63
CSNK1E-206ENST00000413574 PTPRUQ92729 1446 aa43.93■■■■■ 4.62
CSNK1E-206ENST00000413574 TMEM132EQ6IEE7 984 aa43.93■■■■■ 4.62
CSNK1E-206ENST00000413574 ASXL1Q8IXJ9 1541 aa43.93■■■■■ 4.62
CSNK1E-206ENST00000413574 NBPF8Q3BBV2 869 aa43.91■■■■■ 4.62
CSNK1E-206ENST00000413574 TIMELESSQ9UNS1 1208 aa43.89■■■■■ 4.62
CSNK1E-206ENST00000413574 PIK3R4Q99570 1358 aa43.89■■■■■ 4.62
CSNK1E-206ENST00000413574 KCNA6P17658 529 aa43.88■■■■■ 4.61
CSNK1E-206ENST00000413574 LTBP4Q8N2S1 1624 aa43.87■■■■■ 4.61
CSNK1E-206ENST00000413574 NWD1Q149M9 1564 aa43.86■■■■■ 4.61
CSNK1E-206ENST00000413574 KIAA1210Q9ULL0 1709 aa43.85■■■■■ 4.61
CSNK1E-206ENST00000413574 AMOTL2Q9Y2J4 779 aa43.84■■■■■ 4.61
CSNK1E-206ENST00000413574 TRPM1Q7Z4N2 1603 aa43.83■■■■■ 4.61
CSNK1E-206ENST00000413574 XRN1Q8IZH2 1706 aaKnown RBP43.81■■■■■ 4.6
CSNK1E-206ENST00000413574 ADGRB1O14514 1584 aa43.81■■■■■ 4.6
CSNK1E-206ENST00000413574 NBPF1Q3BBV0 1214 aa43.81■■■■■ 4.6
CSNK1E-206ENST00000413574 STK26Q9P289 416 aa43.79■■■■■ 4.6
CSNK1E-206ENST00000413574 YTHDC2Q9H6S0 1430 aaKnown RBP43.75■■■■■ 4.59
CSNK1E-206ENST00000413574 CPS1P31327 1500 aa43.73■■■■■ 4.59
CSNK1E-206ENST00000413574 RBM33Q96EV2 1170 aaKnown RBP43.73■■■■■ 4.59
CSNK1E-206ENST00000413574 LRPPRCP42704 1394 aaKnown RBP43.72■■■■■ 4.59
CSNK1E-206ENST00000413574 NKTRP30414 1462 aaKnown RBP43.71■■■■■ 4.59
CSNK1E-206ENST00000413574 LRRC7Q96NW7 1537 aa43.7■■■■■ 4.59
CSNK1E-206ENST00000413574 PROSER2Q86WR7 435 aaPredicted RBP43.68■■■■■ 4.58
CSNK1E-206ENST00000413574 KNDC1Q76NI1 1749 aa43.67■■■■■ 4.58
CSNK1E-206ENST00000413574 XIRP1Q702N8 1843 aaKnown RBP43.67■■■■■ 4.58
CSNK1E-206ENST00000413574 ROCK2O75116 1388 aaKnown RBP43.66■■■■■ 4.58
CSNK1E-206ENST00000413574 ROBO2Q9HCK4 1378 aa43.66■■■■■ 4.58
CSNK1E-206ENST00000413574 ABCC11Q96J66 1382 aa43.65■■■■■ 4.58
CSNK1E-206ENST00000413574 RALGAPBQ86X10 1494 aa43.65■■■■■ 4.58
CSNK1E-206ENST00000413574 TRAK1Q9UPV9 953 aa43.64■■■■■ 4.58
CSNK1E-206ENST00000413574 TECPR2O15040 1411 aa43.62■■■■■ 4.57
CSNK1E-206ENST00000413574 PTCH1Q13635 1447 aa43.61■■■■■ 4.57
CSNK1E-206ENST00000413574 TMEM94Q12767 1356 aa43.61■■■■■ 4.57
CSNK1E-206ENST00000413574 WAPLQ7Z5K2 1190 aa43.57■■■■■ 4.57
CSNK1E-206ENST00000413574 CERKQ8TCT0 537 aa43.55■■■■■ 4.56
CSNK1E-206ENST00000413574 ARHGEF28Q8N1W1 1705 aaKnown RBP43.55■■■■■ 4.56
CSNK1E-206ENST00000413574 GPRASP1Q5JY77 1395 aa43.54■■■■■ 4.56
CSNK1E-206ENST00000413574 PLEKHH1Q9ULM0 1364 aa43.54■■■■■ 4.56
CSNK1E-206ENST00000413574 DLC1Q96QB1 1528 aa43.52■■■■■ 4.56
CSNK1E-206ENST00000413574 CARD11Q9BXL7 1154 aa43.52■■■■■ 4.56
CSNK1E-206ENST00000413574 PRAM1Q96QH2 718 aa43.5■■■■■ 4.55
CSNK1E-206ENST00000413574 FAM135BQ49AJ0 1406 aa43.48■■■■■ 4.55
CSNK1E-206ENST00000413574 SAFB2Q14151 953 aaKnown RBP eCLIP43.48■■■■■ 4.55
CSNK1E-206ENST00000413574 C14orf37Q86TY3 774 aa43.47■■■■■ 4.55
CSNK1E-206ENST00000413574 SIRT1Q96EB6 747 aa43.47■■■■■ 4.55
CSNK1E-206ENST00000413574 NALCNQ8IZF0 1738 aa43.45■■■■■ 4.55
CSNK1E-206ENST00000413574 POGKQ9P215 609 aa43.44■■■■■ 4.55
CSNK1E-206ENST00000413574 SIPA1L2Q9P2F8 1722 aaPredicted RBP43.44■■■■■ 4.55
CSNK1E-206ENST00000413574 NCOA3Q9Y6Q9 1424 aa43.41■■■■■ 4.54
CSNK1E-206ENST00000413574 IQSEC2Q5JU85 1478 aa43.37■■■■■ 4.53
CSNK1E-206ENST00000413574 ADGRL3Q9HAR2 1447 aa43.36■■■■■ 4.53
CSNK1E-206ENST00000413574 MSH6P52701 1360 aa43.35■■■■■ 4.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms