RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 SCAF11Q99590 1463 aaKnown RBP28.46■■■□□ 2.15
SLC13A3-204ENST00000413164 TMF1P82094 1093 aa28.46■■■□□ 2.15
SLC13A3-204ENST00000413164 CNGB1Q14028 1251 aaPredicted RBP28.45■■■□□ 2.15
SLC13A3-204ENST00000413164 MYBBP1AQ9BQG0 1328 aaKnown RBP28.45■■■□□ 2.15
SLC13A3-204ENST00000413164 PNISRQ8TF01 805 aaKnown RBP28.44■■■□□ 2.14
SLC13A3-204ENST00000413164 BRD4O60885 1362 aaPredicted RBP28.44■■■□□ 2.14
SLC13A3-204ENST00000413164 PARD3Q8TEW0 1356 aa28.44■■■□□ 2.14
SLC13A3-204ENST00000413164 MROH2AA6NES4 1674 aa28.44■■■□□ 2.14
SLC13A3-204ENST00000413164 NPATQ14207 1427 aa28.43■■■□□ 2.14
SLC13A3-204ENST00000413164 REREQ9P2R6 1566 aa28.43■■■□□ 2.14
SLC13A3-204ENST00000413164 WASHC2CQ9Y4E1 1318 aa28.42■■■□□ 2.14
SLC13A3-204ENST00000413164 ADGRB3O60242 1522 aa28.41■■■□□ 2.14
SLC13A3-204ENST00000413164 ABCC3O15438 1527 aa28.41■■■□□ 2.14
SLC13A3-204ENST00000413164 NRXN1Q9ULB1 1477 aa28.4■■■□□ 2.14
SLC13A3-204ENST00000413164 TMC1Q8TDI8 760 aa28.39■■■□□ 2.14
SLC13A3-204ENST00000413164 LRPPRCP42704 1394 aaKnown RBP28.39■■■□□ 2.13
SLC13A3-204ENST00000413164 BCANQ96GW7 911 aa28.37■■■□□ 2.13
SLC13A3-204ENST00000413164 AGLP35573 1532 aa28.37■■■□□ 2.13
SLC13A3-204ENST00000413164 SIGLEC1Q9BZZ2 1709 aa28.36■■■□□ 2.13
SLC13A3-204ENST00000413164 MLECQ14165 292 aa28.35■■■□□ 2.13
SLC13A3-204ENST00000413164 ADGRF5Q8IZF2 1346 aa28.34■■■□□ 2.13
SLC13A3-204ENST00000413164 CAMSAP1Q5T5Y3 1602 aa28.34■■■□□ 2.13
SLC13A3-204ENST00000413164 PANK3Q9H999 370 aa28.33■■■□□ 2.13
SLC13A3-204ENST00000413164 EIF3AQ14152 1382 aaKnown RBP28.32■■■□□ 2.12
SLC13A3-204ENST00000413164 NLRP13Q86W25 1043 aa28.31■■■□□ 2.12
SLC13A3-204ENST00000413164 NOS1P29475 1434 aa28.29■■■□□ 2.12
SLC13A3-204ENST00000413164 CFAP70Q5T0N1 1121 aa28.29■■■□□ 2.12
SLC13A3-204ENST00000413164 SYNMO15061 1565 aa28.29■■■□□ 2.12
SLC13A3-204ENST00000413164 PPLO60437 1756 aa28.28■■■□□ 2.12
SLC13A3-204ENST00000413164 CFAP65Q6ZU64 1925 aaKnown RBP28.28■■■□□ 2.12
SLC13A3-204ENST00000413164 CDCA8Q53HL2 280 aa28.27■■■□□ 2.12
SLC13A3-204ENST00000413164 SMG6Q86US8 1419 aaKnown RBP28.26■■■□□ 2.12
SLC13A3-204ENST00000413164 ZC3H13Q5T200 1668 aaKnown RBP28.26■■■□□ 2.11
SLC13A3-204ENST00000413164 PIK3C2BO00750 1634 aa28.26■■■□□ 2.11
SLC13A3-204ENST00000413164 SETBP1Q9Y6X0 1596 aa28.26■■■□□ 2.11
SLC13A3-204ENST00000413164 ARHGAP31Q2M1Z3 1444 aa28.25■■■□□ 2.11
SLC13A3-204ENST00000413164 MYOM1P52179 1685 aa28.25■■■□□ 2.11
SLC13A3-204ENST00000413164 PPP6R1Q9UPN7 881 aa28.24■■■□□ 2.11
SLC13A3-204ENST00000413164 MYO3AQ8NEV4 1616 aa28.23■■■□□ 2.11
SLC13A3-204ENST00000413164 PIK3C2GO75747 1445 aa28.22■■■□□ 2.11
SLC13A3-204ENST00000413164 ESF1Q9H501 851 aaKnown RBP28.21■■■□□ 2.11
SLC13A3-204ENST00000413164 ERICH6BQ5W0A0 696 aa28.21■■■□□ 2.11
SLC13A3-204ENST00000413164 RPGRIP1LQ68CZ1 1315 aa28.2■■■□□ 2.11
SLC13A3-204ENST00000413164 SLC24A1O60721 1099 aa28.2■■■□□ 2.11
SLC13A3-204ENST00000413164 CC2D1BQ5T0F9 858 aaKnown RBP28.2■■■□□ 2.11
SLC13A3-204ENST00000413164 KDM5AP29375 1690 aaKnown RBP28.2■■■□□ 2.1
SLC13A3-204ENST00000413164 ERVK-7P63135 1459 aa28.18■■■□□ 2.1
SLC13A3-204ENST00000413164 SBNO2Q9Y2G9 1366 aa28.18■■■□□ 2.1
SLC13A3-204ENST00000413164 INSRP06213 1382 aa28.16■■■□□ 2.1
SLC13A3-204ENST00000413164 CHGAP10645 457 aaKnown RBP28.16■■■□□ 2.1
SLC13A3-204ENST00000413164 NUDCQ9Y266 331 aa28.16■■■□□ 2.1
SLC13A3-204ENST00000413164 ADGRB1O14514 1584 aa28.16■■■□□ 2.1
SLC13A3-204ENST00000413164 CLTCQ00610 1675 aaKnown RBP28.15■■■□□ 2.1
SLC13A3-204ENST00000413164 C14orf93Q9H972 538 aaKnown RBP28.14■■■□□ 2.1
SLC13A3-204ENST00000413164 AMER1Q5JTC6 1135 aaPredicted RBP28.14■■■□□ 2.09
SLC13A3-204ENST00000413164 IRX6P78412 446 aaPredicted RBP28.13■■■□□ 2.09
SLC13A3-204ENST00000413164 TSHZ2Q9NRE2 1034 aa28.13■■■□□ 2.09
SLC13A3-204ENST00000413164 KNSTRNQ9Y448 316 aa28.13■■■□□ 2.09
SLC13A3-204ENST00000413164 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
SLC13A3-204ENST00000413164 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
SLC13A3-204ENST00000413164 NEXMIFQ5QGS0 1516 aa28.11■■■□□ 2.09
SLC13A3-204ENST00000413164 RNF123Q5XPI4 1314 aa28.07■■■□□ 2.08
SLC13A3-204ENST00000413164 BLMP54132 1417 aaPredicted RBP28.07■■■□□ 2.08
SLC13A3-204ENST00000413164 PREX1Q8TCU6 1659 aa28.06■■■□□ 2.08
SLC13A3-204ENST00000413164 CENPJQ9HC77 1338 aaPredicted RBP28.05■■■□□ 2.08
SLC13A3-204ENST00000413164 SLC52A1Q9NWF4 448 aa28.04■■■□□ 2.08
SLC13A3-204ENST00000413164 ZMYM3Q14202 1370 aa28.04■■■□□ 2.08
SLC13A3-204ENST00000413164 IDI1Q13907 227 aa28.03■■■□□ 2.08
SLC13A3-204ENST00000413164 FBXO31Q5XUX0 539 aaPredicted RBP28.02■■■□□ 2.08
SLC13A3-204ENST00000413164 ZFYVE9O95405 1425 aa28.02■■■□□ 2.08
SLC13A3-204ENST00000413164 SENP3-EIF4A1A0A087X0R7 540 aa28.02■■■□□ 2.08
SLC13A3-204ENST00000413164 PPP2R1AP30153 589 aa28.02■■■□□ 2.08
SLC13A3-204ENST00000413164 QRICH2Q9H0J4 1663 aa28.02■■■□□ 2.08
SLC13A3-204ENST00000413164 VGFO15240 615 aaPredicted RBP28.01■■■□□ 2.07
SLC13A3-204ENST00000413164 PPP4R2Q9NY27 417 aa28.01■■■□□ 2.07
SLC13A3-204ENST00000413164 FER1L4A9Z1Z3 1794 aa28■■■□□ 2.07
SLC13A3-204ENST00000413164 TMEM131LA2VDJ0 1609 aa27.99■■■□□ 2.07
SLC13A3-204ENST00000413164 TRAK1Q9UPV9 953 aa27.98■■■□□ 2.07
SLC13A3-204ENST00000413164 TMEM132EQ6IEE7 984 aa27.97■■■□□ 2.07
SLC13A3-204ENST00000413164 MYO5BQ9ULV0 1848 aa27.96■■■□□ 2.07
SLC13A3-204ENST00000413164 PDE3BQ13370 1112 aa27.96■■■□□ 2.07
SLC13A3-204ENST00000413164 ARHGEF28Q8N1W1 1705 aaKnown RBP27.95■■■□□ 2.06
SLC13A3-204ENST00000413164 PLPPR3Q6T4P5 718 aa27.94■■■□□ 2.06
SLC13A3-204ENST00000413164 CARD14Q9BXL6 1004 aa27.94■■■□□ 2.06
SLC13A3-204ENST00000413164 CEBPAP49715 358 aaPredicted RBP27.92■■■□□ 2.06
SLC13A3-204ENST00000413164 NUTM2DQ5VT03 806 aaPredicted RBP27.9■■■□□ 2.06
SLC13A3-204ENST00000413164 ADAMTS8Q9UP79 889 aa27.89■■■□□ 2.06
SLC13A3-204ENST00000413164 SPATA31D1Q6ZQQ2 1576 aa27.89■■■□□ 2.05
SLC13A3-204ENST00000413164 PUS7Q96PZ0 661 aaKnown RBP27.87■■■□□ 2.05
SLC13A3-204ENST00000413164 ADAMTSL3P82987 1691 aa27.86■■■□□ 2.05
SLC13A3-204ENST00000413164 RIMS1Q86UR5 1692 aaKnown RBP27.86■■■□□ 2.05
SLC13A3-204ENST00000413164 C3P01024 1663 aa27.86■■■□□ 2.05
SLC13A3-204ENST00000413164 SALL2Q9Y467 1007 aaPredicted RBP27.84■■■□□ 2.05
SLC13A3-204ENST00000413164 TULP4Q9NRJ4 1543 aa27.84■■■□□ 2.05
SLC13A3-204ENST00000413164 STAG3Q9UJ98 1225 aa27.82■■■□□ 2.04
SLC13A3-204ENST00000413164 TNRQ92752 1358 aa27.82■■■□□ 2.04
SLC13A3-204ENST00000413164 USP32Q8NFA0 1604 aa27.82■■■□□ 2.04
SLC13A3-204ENST00000413164 WDR43Q15061 677 aaKnown RBP eCLIP27.81■■■□□ 2.04
SLC13A3-204ENST00000413164 SLC12A5Q9H2X9 1139 aa27.8■■■□□ 2.04
SLC13A3-204ENST00000413164 CDCA7LQ96GN5 454 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms