RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 ANKLE2Q86XL3 938 aa12.17□□□□□ -0.46
RPE-204ENST00000411934 ZFYVE9O95405 1425 aa12.17□□□□□ -0.46
RPE-204ENST00000411934 IQGAP1P46940 1657 aa12.16□□□□□ -0.46
RPE-204ENST00000411934 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
RPE-204ENST00000411934 CCDC144AA2RUR9 1427 aa12.16□□□□□ -0.46
RPE-204ENST00000411934 NPHP4O75161 1426 aaPredicted RBP12.15□□□□□ -0.46
RPE-204ENST00000411934 HDGFP51858 240 aaKnown RBP12.15□□□□□ -0.46
RPE-204ENST00000411934 C1QBPQ07021 282 aaKnown RBP12.15□□□□□ -0.46
RPE-204ENST00000411934 MYO5BQ9ULV0 1848 aa12.15□□□□□ -0.46
RPE-204ENST00000411934 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPE-204ENST00000411934 EID1Q9Y6B2 187 aa12.14□□□□□ -0.47
RPE-204ENST00000411934 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
RPE-204ENST00000411934 RIMS2Q9UQ26 1411 aa12.12□□□□□ -0.47
RPE-204ENST00000411934 PLEKHG1Q9ULL1 1385 aa12.12□□□□□ -0.47
RPE-204ENST00000411934 NEXMIFQ5QGS0 1516 aa12.11□□□□□ -0.47
RPE-204ENST00000411934 RPGRIP1LQ68CZ1 1315 aa12.11□□□□□ -0.47
RPE-204ENST00000411934 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
RPE-204ENST00000411934 IQSEC2Q5JU85 1478 aa12.1□□□□□ -0.47
RPE-204ENST00000411934 ANKRD30BQ9BXX2 1392 aa12.1□□□□□ -0.47
RPE-204ENST00000411934 SPATA31E1Q6ZUB1 1445 aa12.1□□□□□ -0.47
RPE-204ENST00000411934 TXNDC2Q86VQ3 553 aa12.09□□□□□ -0.47
RPE-204ENST00000411934 CPS1P31327 1500 aa12.09□□□□□ -0.47
RPE-204ENST00000411934 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
RPE-204ENST00000411934 PPLO60437 1756 aa12.08□□□□□ -0.48
RPE-204ENST00000411934 LTKP29376 864 aa12.08□□□□□ -0.48
RPE-204ENST00000411934 IFT172Q9UG01 1749 aa12.08□□□□□ -0.48
RPE-204ENST00000411934 LTBP4Q8N2S1 1624 aa12.08□□□□□ -0.48
RPE-204ENST00000411934 PIK3R4Q99570 1358 aa12.06□□□□□ -0.48
RPE-204ENST00000411934 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
RPE-204ENST00000411934 CHGAP10645 457 aaKnown RBP12.06□□□□□ -0.48
RPE-204ENST00000411934 PPP1R15AO75807 674 aaPredicted RBP12.05□□□□□ -0.48
RPE-204ENST00000411934 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
RPE-204ENST00000411934 NKTRP30414 1462 aaKnown RBP12.05□□□□□ -0.48
RPE-204ENST00000411934 MYOM2P54296 1465 aa12.05□□□□□ -0.48
RPE-204ENST00000411934 NRXN3Q9Y4C0 1643 aa12.04□□□□□ -0.48
RPE-204ENST00000411934 VGFO15240 615 aaPredicted RBP12.04□□□□□ -0.48
RPE-204ENST00000411934 ADAMTS13Q76LX8 1427 aa12.03□□□□□ -0.48
RPE-204ENST00000411934 ZNF326Q5BKZ1 582 aaKnown RBP12.03□□□□□ -0.48
RPE-204ENST00000411934 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
RPE-204ENST00000411934 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.48
RPE-204ENST00000411934 LAMC1P11047 1609 aa12.02□□□□□ -0.49
RPE-204ENST00000411934 TBX22Q9Y458 520 aa12.02□□□□□ -0.49
RPE-204ENST00000411934 PRAG1Q86YV5 1406 aa12.02□□□□□ -0.49
RPE-204ENST00000411934 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
RPE-204ENST00000411934 CHD2O14647 1828 aaKnown RBP12□□□□□ -0.49
RPE-204ENST00000411934 ZNF335Q9H4Z2 1342 aaPredicted RBP12□□□□□ -0.49
RPE-204ENST00000411934 PIK3C2GO75747 1445 aa12□□□□□ -0.49
RPE-204ENST00000411934 XRN1Q8IZH2 1706 aaKnown RBP11.99□□□□□ -0.49
RPE-204ENST00000411934 STRCP1A6NGW2 1772 aa11.99□□□□□ -0.49
RPE-204ENST00000411934 NCOA3Q9Y6Q9 1424 aa11.98□□□□□ -0.49
RPE-204ENST00000411934 CLSPNQ9HAW4 1339 aa11.98□□□□□ -0.49
RPE-204ENST00000411934 KCNA6P17658 529 aa11.98□□□□□ -0.49
RPE-204ENST00000411934 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
RPE-204ENST00000411934 CERKQ8TCT0 537 aa11.97□□□□□ -0.49
RPE-204ENST00000411934 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.49
RPE-204ENST00000411934 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
RPE-204ENST00000411934 BCANQ96GW7 911 aa11.95□□□□□ -0.5
RPE-204ENST00000411934 SLC26A8Q96RN1 970 aa11.95□□□□□ -0.5
RPE-204ENST00000411934 KNDC1Q76NI1 1749 aa11.94□□□□□ -0.5
RPE-204ENST00000411934 RGL3Q3MIN7 710 aa11.94□□□□□ -0.5
RPE-204ENST00000411934 KIAA1210Q9ULL0 1709 aa11.94□□□□□ -0.5
RPE-204ENST00000411934 TECPR2O15040 1411 aa11.94□□□□□ -0.5
RPE-204ENST00000411934 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
RPE-204ENST00000411934 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
RPE-204ENST00000411934 PCGF6Q9BYE7 350 aa11.92□□□□□ -0.5
RPE-204ENST00000411934 XIRP1Q702N8 1843 aaKnown RBP11.92□□□□□ -0.5
RPE-204ENST00000411934 DCCP43146 1447 aa11.92□□□□□ -0.5
RPE-204ENST00000411934 PTPRUQ92729 1446 aa11.92□□□□□ -0.5
RPE-204ENST00000411934 METP08581 1390 aa11.92□□□□□ -0.5
RPE-204ENST00000411934 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
RPE-204ENST00000411934 FBXO41Q8TF61 875 aa11.9□□□□□ -0.5
RPE-204ENST00000411934 C14orf93Q9H972 538 aaKnown RBP11.9□□□□□ -0.5
RPE-204ENST00000411934 TMEM94Q12767 1356 aa11.9□□□□□ -0.5
RPE-204ENST00000411934 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
RPE-204ENST00000411934 DLC1Q96QB1 1528 aa11.89□□□□□ -0.51
RPE-204ENST00000411934 LRPPRCP42704 1394 aaKnown RBP11.89□□□□□ -0.51
RPE-204ENST00000411934 FAM135BQ49AJ0 1406 aa11.88□□□□□ -0.51
RPE-204ENST00000411934 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
RPE-204ENST00000411934 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
RPE-204ENST00000411934 ABCC11Q96J66 1382 aa11.88□□□□□ -0.51
RPE-204ENST00000411934 YTHDC2Q9H6S0 1430 aaKnown RBP11.87□□□□□ -0.51
RPE-204ENST00000411934 MSH6P52701 1360 aa11.87□□□□□ -0.51
RPE-204ENST00000411934 ADGRL3Q9HAR2 1447 aa11.86□□□□□ -0.51
RPE-204ENST00000411934 PROSER2Q86WR7 435 aaPredicted RBP11.86□□□□□ -0.51
RPE-204ENST00000411934 SIRT1Q96EB6 747 aa11.86□□□□□ -0.51
RPE-204ENST00000411934 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
RPE-204ENST00000411934 TONSLQ96HA7 1378 aa11.86□□□□□ -0.51
RPE-204ENST00000411934 TOM1O60784 492 aa11.85□□□□□ -0.51
RPE-204ENST00000411934 CDC42BPGQ6DT37 1551 aa11.84□□□□□ -0.51
RPE-204ENST00000411934 NALCNQ8IZF0 1738 aa11.84□□□□□ -0.51
RPE-204ENST00000411934 TRPM1Q7Z4N2 1603 aa11.84□□□□□ -0.51
RPE-204ENST00000411934 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.83□□□□□ -0.52
RPE-204ENST00000411934 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
RPE-204ENST00000411934 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
RPE-204ENST00000411934 SIN3AQ96ST3 1273 aa11.83□□□□□ -0.52
RPE-204ENST00000411934 CFAP70Q5T0N1 1121 aa11.82□□□□□ -0.52
RPE-204ENST00000411934 C19orf44Q9H6X5 657 aa11.82□□□□□ -0.52
RPE-204ENST00000411934 KDM2AQ9Y2K7 1162 aa11.82□□□□□ -0.52
RPE-204ENST00000411934 ADGRB2O60241 1585 aa11.82□□□□□ -0.52
RPE-204ENST00000411934 ARHGEF28Q8N1W1 1705 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms