RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 MED19A0JLT2 244 aaPredicted RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ENO4A6NNW6 628 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BTBD11A6QL63 1104 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP9-7A8MTY7 169 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PPP1R37O75864 691 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 EGFRP00533 1210 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 GPR162Q16538 588 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MEX3CQ5U5Q3 659 aaKnown RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP5-2Q701N4 177 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ZNF513Q8N8E2 541 aaPredicted RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SYMPKQ92797 1274 aaKnown RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SPG7Q9UQ90 795 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SMARCA4P51532 1647 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CICQ96RK0 1608 aaPredicted RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 EP400Q96L91 3159 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PIEZO1Q92508 2521 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 FSIP2Q5CZC0 6907 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MACF1Q9UPN3 7388 aaKnown RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NCKAP5LQ9HCH0 1330 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LAMB4A4D0S4 1761 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 UBR5O95071 2799 aaPredicted RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LCHNA4D1U4 455 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KIF3CO14782 793 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 WIPF1O43516 503 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP5-8O75690 187 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SRSF11Q05519 484 aaKnown RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SF3B2Q13435 895 aaKnown RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KCNC3Q14003 757 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP21-3Q3LHN1 58 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LCE1DQ5T752 114 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HIST2H2BCQ6DN03 193 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HIST2H2BDQ6DRA6 164 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP5-4Q6L8H1 288 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 COL23A1Q86Y22 540 aaPredicted RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 FMNL2Q96PY5 1086 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LSM14BQ9BX40 385 aaKnown RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 C1QTNF1Q9BXJ1 281 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP9-3Q9BYQ3 159 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP4-3Q9BYR4 195 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MCOLN1Q9GZU1 580 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 STXBP5LQ9Y2K9 1186 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BOD1L1Q8NFC6 3051 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CFAP46Q8IYW2 2715 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RSF1Q96T23 1441 aaPredicted RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SSPOA2VEC9 5147 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ZNF318Q5VUA4 2279 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 FASNP49327 2511 aaKnown RBP0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CHD4Q14839 1912 aa0.62□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 AHNAKQ09666 5890 aaKnown RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SPTBN4Q9H254 2564 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SHANK2Q9UPX8 1470 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 USP34Q70CQ2 3546 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SLIT2O94813 1529 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ARID3CA6NKF2 412 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BHMG1C9JSJ3 638 aaPredicted RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TOMM70O94826 608 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ID4P47928 161 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NHLH1Q02575 133 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LRRC41Q15345 812 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LARP1BQ659C4 914 aaKnown RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP5-5Q701N2 237 aaPredicted RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CABLES1Q8TDN4 633 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CAMKK2Q96RR4 588 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LRFN3Q9BTN0 628 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SPON1Q9HCB6 807 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MTMR10Q9NXD2 777 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 COL4A3Q01955 1670 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NOTCH2Q04721 2471 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SMARCA2P51531 1590 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NBEAQ8NFP9 2946 aa0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RPRD2Q5VT52 1461 aaKnown RBP0.61□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 STRCQ7RTU9 1775 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CSMD1Q96PZ7 3565 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PIK3C2AO00443 1686 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KDM5AP29375 1690 aaKnown RBP0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CFAP43Q8NDM7 1665 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 JMJD1CQ15652 2540 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ARHGAP6O43182 974 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NTRK1P04629 796 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HSPA8P11142 646 aaKnown RBP0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ANKRD13DQ6ZTN6 518 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 DEFB123Q8N688 67 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CHAMP1Q96JM3 812 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KRTAP4-4Q9BYR3 166 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 VWDEQ8N2E2 1590 aa0.6□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LAMA3Q16787 3333 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TENM1Q9UKZ4 2725 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CLASP1Q7Z460 1538 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PRUNE2Q8WUY3 3088 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 DCHS1Q96JQ0 3298 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PDZD2O15018 2839 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RB1CC1Q8TDY2 1594 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BLMP54132 1417 aaPredicted RBP0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MST1RQ04912 1400 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HMCN2Q8NDA2 5059 aa0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 POU3F2P20265 443 aaPredicted RBP0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RBM6P78332 1123 aaKnown RBP0.59□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 DGKZQ13574 1117 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms