RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 LNPKQ9C0E8 428 aa17.97■□□□□ 0.47
PCNX4-203ENST00000406854 EID1Q9Y6B2 187 aa17.97■□□□□ 0.47
PCNX4-203ENST00000406854 C22orf23Q9BZE7 217 aa17.96■□□□□ 0.47
PCNX4-203ENST00000406854 TPM4P67936 248 aa17.96■□□□□ 0.47
PCNX4-203ENST00000406854 ATP6V1DQ9Y5K8 247 aa17.96■□□□□ 0.47
PCNX4-203ENST00000406854 PNISRQ8TF01 805 aaKnown RBP17.95■□□□□ 0.46
PCNX4-203ENST00000406854 KIF3AQ9Y496 699 aa17.95■□□□□ 0.46
PCNX4-203ENST00000406854 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
PCNX4-203ENST00000406854 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
PCNX4-203ENST00000406854 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
PCNX4-203ENST00000406854 CFTRP13569 1480 aa17.93■□□□□ 0.46
PCNX4-203ENST00000406854 AKNAQ7Z591 1439 aa17.93■□□□□ 0.46
PCNX4-203ENST00000406854 TAF7LQ5H9L4 462 aa17.92■□□□□ 0.46
PCNX4-203ENST00000406854 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
PCNX4-203ENST00000406854 CCDC34Q96HJ3 373 aa17.92■□□□□ 0.46
PCNX4-203ENST00000406854 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
PCNX4-203ENST00000406854 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
PCNX4-203ENST00000406854 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
PCNX4-203ENST00000406854 SF3A1Q15459 793 aaKnown RBP17.9■□□□□ 0.46
PCNX4-203ENST00000406854 NBPF1Q3BBV0 1214 aa17.9■□□□□ 0.46
PCNX4-203ENST00000406854 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
PCNX4-203ENST00000406854 MTHFSP49914 203 aa17.9■□□□□ 0.46
PCNX4-203ENST00000406854 BACH2Q9BYV9 841 aa17.89■□□□□ 0.45
PCNX4-203ENST00000406854 GNAI1P63096 354 aa17.89■□□□□ 0.45
PCNX4-203ENST00000406854 GGNBP2Q9H3C7 697 aa17.89■□□□□ 0.45
PCNX4-203ENST00000406854 DIAPH3Q9NSV4 1193 aa17.89■□□□□ 0.45
PCNX4-203ENST00000406854 NUCB2P80303 420 aa17.88■□□□□ 0.45
PCNX4-203ENST00000406854 ANO2Q9NQ90 1003 aa17.87■□□□□ 0.45
PCNX4-203ENST00000406854 TEFQ10587 303 aa17.87■□□□□ 0.45
PCNX4-203ENST00000406854 ISY1Q9ULR0 285 aaKnown RBP17.87■□□□□ 0.45
PCNX4-203ENST00000406854 H3BQV1 296 aa17.87■□□□□ 0.45
PCNX4-203ENST00000406854 IFFO2Q5TF58 517 aa17.87■□□□□ 0.45
PCNX4-203ENST00000406854 PDE3AQ14432 1141 aa17.86■□□□□ 0.45
PCNX4-203ENST00000406854 INTS3Q68E01 1043 aaKnown RBP17.86■□□□□ 0.45
PCNX4-203ENST00000406854 CFAP70Q5T0N1 1121 aa17.86■□□□□ 0.45
PCNX4-203ENST00000406854 FAM184AQ8NB25 1140 aa17.86■□□□□ 0.45
PCNX4-203ENST00000406854 RUFY2Q8WXA3 655 aa17.86■□□□□ 0.45
PCNX4-203ENST00000406854 WDR97A6NE52 1622 aa17.86■□□□□ 0.45
PCNX4-203ENST00000406854 FRAT2O75474 233 aaPredicted RBP17.85■□□□□ 0.45
PCNX4-203ENST00000406854 ZKSCAN1P17029 563 aaPredicted RBP17.85■□□□□ 0.45
PCNX4-203ENST00000406854 ROCK1Q13464 1354 aa17.85■□□□□ 0.45
PCNX4-203ENST00000406854 HMOX1P09601 288 aa17.85■□□□□ 0.45
PCNX4-203ENST00000406854 FKBP5Q13451 457 aaPredicted RBP17.84■□□□□ 0.45
PCNX4-203ENST00000406854 AMER1Q5JTC6 1135 aaPredicted RBP17.84■□□□□ 0.45
PCNX4-203ENST00000406854 AQRO60306 1485 aaKnown RBP eCLIP17.84■□□□□ 0.45
PCNX4-203ENST00000406854 BECN2A8MW95 431 aa17.84■□□□□ 0.45
PCNX4-203ENST00000406854 GOLGA6L19H0YKK7 550 aa17.84■□□□□ 0.45
PCNX4-203ENST00000406854 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
PCNX4-203ENST00000406854 EIF2S2P20042 333 aaKnown RBP17.84■□□□□ 0.45
PCNX4-203ENST00000406854 SMG6Q86US8 1419 aaKnown RBP17.84■□□□□ 0.45
PCNX4-203ENST00000406854 MRE11P49959 708 aa17.83■□□□□ 0.44
PCNX4-203ENST00000406854 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.44
PCNX4-203ENST00000406854 PDZRN3Q9UPQ7 1066 aa17.83■□□□□ 0.44
PCNX4-203ENST00000406854 KIAA1107Q9UPP5 1409 aa17.83■□□□□ 0.44
PCNX4-203ENST00000406854 VSIG10Q8N0Z9 540 aa17.83■□□□□ 0.44
PCNX4-203ENST00000406854 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.44
PCNX4-203ENST00000406854 NECTIN2Q92692 538 aa17.83■□□□□ 0.44
PCNX4-203ENST00000406854 BCAR3O75815 825 aa17.81■□□□□ 0.44
PCNX4-203ENST00000406854 TOMM22Q9NS69 142 aa17.81■□□□□ 0.44
PCNX4-203ENST00000406854 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
PCNX4-203ENST00000406854 MCTP1Q6DN14 999 aa17.81■□□□□ 0.44
PCNX4-203ENST00000406854 CHMP4CQ96CF2 233 aa17.81■□□□□ 0.44
PCNX4-203ENST00000406854 CDC45O75419 566 aa17.8■□□□□ 0.44
PCNX4-203ENST00000406854 TRAK2O60296 914 aa17.8■□□□□ 0.44
PCNX4-203ENST00000406854 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
PCNX4-203ENST00000406854 C1orf141Q5JVX7 400 aa17.8■□□□□ 0.44
PCNX4-203ENST00000406854 AFAP1Q8N556 730 aa17.8■□□□□ 0.44
PCNX4-203ENST00000406854 EXOSC9Q06265 439 aaKnown RBP17.79■□□□□ 0.44
PCNX4-203ENST00000406854 NEXNQ0ZGT2 675 aa17.79■□□□□ 0.44
PCNX4-203ENST00000406854 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
PCNX4-203ENST00000406854 BRPF3Q9ULD4 1205 aa17.79■□□□□ 0.44
PCNX4-203ENST00000406854 IFIT2P09913 472 aaKnown RBP17.78■□□□□ 0.44
PCNX4-203ENST00000406854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.78■□□□□ 0.44
PCNX4-203ENST00000406854 RASSF8Q8NHQ8 419 aa17.77■□□□□ 0.44
PCNX4-203ENST00000406854 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
PCNX4-203ENST00000406854 FAM13BQ9NYF5 915 aa17.77■□□□□ 0.43
PCNX4-203ENST00000406854 CREBRFQ8IUR6 639 aa17.76■□□□□ 0.43
PCNX4-203ENST00000406854 EFCAB5A4FU69 1503 aa17.76■□□□□ 0.43
PCNX4-203ENST00000406854 VPS37CA5D8V6 355 aaPredicted RBP17.76■□□□□ 0.43
PCNX4-203ENST00000406854 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCNX4-203ENST00000406854 SMC3Q9UQE7 1217 aa17.76■□□□□ 0.43
PCNX4-203ENST00000406854 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.76■□□□□ 0.43
PCNX4-203ENST00000406854 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
PCNX4-203ENST00000406854 NAIPQ13075 1403 aa17.75■□□□□ 0.43
PCNX4-203ENST00000406854 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
PCNX4-203ENST00000406854 NASPP49321 788 aaPredicted RBP17.75■□□□□ 0.43
PCNX4-203ENST00000406854 RNF20Q5VTR2 975 aa17.74■□□□□ 0.43
PCNX4-203ENST00000406854 TNNT3P45378 269 aaPredicted RBP17.74■□□□□ 0.43
PCNX4-203ENST00000406854 CPLX2Q6PUV4 134 aaKnown RBP17.74■□□□□ 0.43
PCNX4-203ENST00000406854 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
PCNX4-203ENST00000406854 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
PCNX4-203ENST00000406854 TOP2BQ02880 1626 aa17.74■□□□□ 0.43
PCNX4-203ENST00000406854 TPM3P06753 285 aa17.73■□□□□ 0.43
PCNX4-203ENST00000406854 HSP90AB4PQ58FF6 505 aa17.73■□□□□ 0.43
PCNX4-203ENST00000406854 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
PCNX4-203ENST00000406854 PRKAR2BP31323 418 aa17.72■□□□□ 0.43
PCNX4-203ENST00000406854 G3BP1Q13283 466 aaKnown RBP eCLIP17.72■□□□□ 0.43
PCNX4-203ENST00000406854 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
PCNX4-203ENST00000406854 C9orf84Q5VXU9 1444 aa17.72■□□□□ 0.43
PCNX4-203ENST00000406854 GOLGA6L1Q8N7Z2 621 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms