RNA–Protein interactions for RNA: ENST00000406453.3

SLC29A4-203, Transcript of solute carrier family 29 member 4, humanhuman

TSL 1 (best) BASIC

Gene SLC29A4, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-203ENST00000406453 IFT172Q9UG01 1749 aa20.12■□□□□ 0.81
SLC29A4-203ENST00000406453 IDI1Q13907 227 aa20.11■□□□□ 0.81
SLC29A4-203ENST00000406453 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
SLC29A4-203ENST00000406453 IQGAP1P46940 1657 aa20.11■□□□□ 0.81
SLC29A4-203ENST00000406453 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
SLC29A4-203ENST00000406453 NEURL4Q96JN8 1562 aa20.08■□□□□ 0.8
SLC29A4-203ENST00000406453 MYOM2P54296 1465 aa20.08■□□□□ 0.8
SLC29A4-203ENST00000406453 TMEM132EQ6IEE7 984 aa20.07■□□□□ 0.8
SLC29A4-203ENST00000406453 SCAF11Q99590 1463 aaKnown RBP20.06■□□□□ 0.8
SLC29A4-203ENST00000406453 HNRNPUQ00839 825 aaKnown RBP eCLIP20.06■□□□□ 0.8
SLC29A4-203ENST00000406453 TMF1P82094 1093 aa20.06■□□□□ 0.8
SLC29A4-203ENST00000406453 PPLO60437 1756 aa20.06■□□□□ 0.8
SLC29A4-203ENST00000406453 ZC3H13Q5T200 1668 aaKnown RBP20.06■□□□□ 0.8
SLC29A4-203ENST00000406453 PIK3C2BO00750 1634 aa20.05■□□□□ 0.8
SLC29A4-203ENST00000406453 STAC3Q96MF2 364 aa20.05■□□□□ 0.8
SLC29A4-203ENST00000406453 SENP3-EIF4A1A0A087X0R7 540 aa20.04■□□□□ 0.8
SLC29A4-203ENST00000406453 ARHGAP31Q2M1Z3 1444 aa20.04■□□□□ 0.8
SLC29A4-203ENST00000406453 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
SLC29A4-203ENST00000406453 MYO5BQ9ULV0 1848 aa20.04■□□□□ 0.8
SLC29A4-203ENST00000406453 PREX1Q8TCU6 1659 aa20.04■□□□□ 0.8
SLC29A4-203ENST00000406453 NRXN1Q9ULB1 1477 aa20.03■□□□□ 0.8
SLC29A4-203ENST00000406453 PANK3Q9H999 370 aa20.03■□□□□ 0.8
SLC29A4-203ENST00000406453 CLTCQ00610 1675 aaKnown RBP20.02■□□□□ 0.8
SLC29A4-203ENST00000406453 KIAA1210Q9ULL0 1709 aa20.01■□□□□ 0.79
SLC29A4-203ENST00000406453 TRAK1Q9UPV9 953 aa20.01■□□□□ 0.79
SLC29A4-203ENST00000406453 PER1O15534 1290 aaPredicted RBP20.01■□□□□ 0.79
SLC29A4-203ENST00000406453 PIK3C2GO75747 1445 aa20■□□□□ 0.79
SLC29A4-203ENST00000406453 ARHGEF40Q8TER5 1519 aa19.99■□□□□ 0.79
SLC29A4-203ENST00000406453 CC2D1BQ5T0F9 858 aaKnown RBP19.99■□□□□ 0.79
SLC29A4-203ENST00000406453 NEXMIFQ5QGS0 1516 aa19.98■□□□□ 0.79
SLC29A4-203ENST00000406453 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
SLC29A4-203ENST00000406453 AGLP35573 1532 aa19.97■□□□□ 0.79
SLC29A4-203ENST00000406453 REREQ9P2R6 1566 aa19.97■□□□□ 0.79
SLC29A4-203ENST00000406453 SLC52A1Q9NWF4 448 aa19.96■□□□□ 0.79
SLC29A4-203ENST00000406453 ERVK-7P63135 1459 aa19.96■□□□□ 0.79
SLC29A4-203ENST00000406453 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
SLC29A4-203ENST00000406453 RPGRIP1LQ68CZ1 1315 aa19.95■□□□□ 0.78
SLC29A4-203ENST00000406453 TMEM131LA2VDJ0 1609 aa19.94■□□□□ 0.78
SLC29A4-203ENST00000406453 EIF3AQ14152 1382 aaKnown RBP19.94■□□□□ 0.78
SLC29A4-203ENST00000406453 ADGRB1O14514 1584 aa19.93■□□□□ 0.78
SLC29A4-203ENST00000406453 VGFO15240 615 aaPredicted RBP19.92■□□□□ 0.78
SLC29A4-203ENST00000406453 STAG3Q9UJ98 1225 aa19.91■□□□□ 0.78
SLC29A4-203ENST00000406453 TMC1Q8TDI8 760 aa19.91■□□□□ 0.78
SLC29A4-203ENST00000406453 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
SLC29A4-203ENST00000406453 STK26Q9P289 416 aa19.9■□□□□ 0.78
SLC29A4-203ENST00000406453 KTN1Q86UP2 1357 aaKnown RBP19.89■□□□□ 0.78
SLC29A4-203ENST00000406453 MYOM1P52179 1685 aa19.89■□□□□ 0.77
SLC29A4-203ENST00000406453 MYBBP1AQ9BQG0 1328 aaKnown RBP19.89■□□□□ 0.77
SLC29A4-203ENST00000406453 CENPJQ9HC77 1338 aaPredicted RBP19.89■□□□□ 0.77
SLC29A4-203ENST00000406453 SETBP1Q9Y6X0 1596 aa19.89■□□□□ 0.77
SLC29A4-203ENST00000406453 PNISRQ8TF01 805 aaKnown RBP19.88■□□□□ 0.77
SLC29A4-203ENST00000406453 PARD3Q8TEW0 1356 aa19.88■□□□□ 0.77
SLC29A4-203ENST00000406453 RALBP1Q15311 655 aa19.87■□□□□ 0.77
SLC29A4-203ENST00000406453 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
SLC29A4-203ENST00000406453 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
SLC29A4-203ENST00000406453 ZMYM3Q14202 1370 aa19.87■□□□□ 0.77
SLC29A4-203ENST00000406453 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
SLC29A4-203ENST00000406453 KDM5AP29375 1690 aaKnown RBP19.85■□□□□ 0.77
SLC29A4-203ENST00000406453 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
SLC29A4-203ENST00000406453 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
SLC29A4-203ENST00000406453 ASXL1Q8IXJ9 1541 aa19.84■□□□□ 0.77
SLC29A4-203ENST00000406453 SPATA31D1Q6ZQQ2 1576 aa19.84■□□□□ 0.77
SLC29A4-203ENST00000406453 MYO3AQ8NEV4 1616 aa19.84■□□□□ 0.77
SLC29A4-203ENST00000406453 CEBPAP49715 358 aaPredicted RBP19.83■□□□□ 0.77
SLC29A4-203ENST00000406453 CDCA8Q53HL2 280 aa19.83■□□□□ 0.77
SLC29A4-203ENST00000406453 KNSTRNQ9Y448 316 aa19.83■□□□□ 0.76
SLC29A4-203ENST00000406453 A2ML1A8K2U0 1454 aa19.81■□□□□ 0.76
SLC29A4-203ENST00000406453 AMER1Q5JTC6 1135 aaPredicted RBP19.81■□□□□ 0.76
SLC29A4-203ENST00000406453 CARD14Q9BXL6 1004 aa19.81■□□□□ 0.76
SLC29A4-203ENST00000406453 BRD4O60885 1362 aaPredicted RBP19.8■□□□□ 0.76
SLC29A4-203ENST00000406453 ARHGEF28Q8N1W1 1705 aaKnown RBP19.8■□□□□ 0.76
SLC29A4-203ENST00000406453 ZFYVE9O95405 1425 aa19.79■□□□□ 0.76
SLC29A4-203ENST00000406453 NLRP13Q86W25 1043 aa19.79■□□□□ 0.76
SLC29A4-203ENST00000406453 SLC12A5Q9H2X9 1139 aa19.79■□□□□ 0.76
SLC29A4-203ENST00000406453 BCANQ96GW7 911 aa19.79■□□□□ 0.76
SLC29A4-203ENST00000406453 FKBP8Q14318 412 aa19.78■□□□□ 0.76
SLC29A4-203ENST00000406453 ZBED9Q6R2W3 1325 aa19.77■□□□□ 0.75
SLC29A4-203ENST00000406453 SBNO2Q9Y2G9 1366 aa19.76■□□□□ 0.75
SLC29A4-203ENST00000406453 RIMS2Q9UQ26 1411 aa19.76■□□□□ 0.75
SLC29A4-203ENST00000406453 CABP2Q9NPB3 220 aa19.76■□□□□ 0.75
SLC29A4-203ENST00000406453 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
SLC29A4-203ENST00000406453 ALKQ9UM73 1620 aa19.75■□□□□ 0.75
SLC29A4-203ENST00000406453 PRAM1Q96QH2 718 aa19.75■□□□□ 0.75
SLC29A4-203ENST00000406453 TULP4Q9NRJ4 1543 aa19.74■□□□□ 0.75
SLC29A4-203ENST00000406453 MINK1Q8N4C8 1332 aaPredicted RBP19.74■□□□□ 0.75
SLC29A4-203ENST00000406453 LRPPRCP42704 1394 aaKnown RBP19.74■□□□□ 0.75
SLC29A4-203ENST00000406453 PRKCSHP14314 528 aaPredicted RBP19.74■□□□□ 0.75
SLC29A4-203ENST00000406453 IRX6P78412 446 aaPredicted RBP19.74■□□□□ 0.75
SLC29A4-203ENST00000406453 PPP2R1AP30153 589 aa19.73■□□□□ 0.75
SLC29A4-203ENST00000406453 TNRQ92752 1358 aa19.72■□□□□ 0.75
SLC29A4-203ENST00000406453 YTHDC2Q9H6S0 1430 aaKnown RBP19.72■□□□□ 0.75
SLC29A4-203ENST00000406453 PTPRMP28827 1452 aa19.72■□□□□ 0.75
SLC29A4-203ENST00000406453 WAPLQ7Z5K2 1190 aa19.7■□□□□ 0.74
SLC29A4-203ENST00000406453 POGKQ9P215 609 aa19.69■□□□□ 0.74
SLC29A4-203ENST00000406453 EVC2Q86UK5 1308 aa19.68■□□□□ 0.74
SLC29A4-203ENST00000406453 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
SLC29A4-203ENST00000406453 NSD3Q9BZ95 1437 aa19.67■□□□□ 0.74
SLC29A4-203ENST00000406453 TNNT2P45379 298 aaPredicted RBP19.67■□□□□ 0.74
SLC29A4-203ENST00000406453 SRPK2P78362 688 aaKnown RBP19.67■□□□□ 0.74
SLC29A4-203ENST00000406453 PLEKHH1Q9ULM0 1364 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms