RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 TSPY4P0CV99 314 aa20.26■□□□□ 0.83
ATG4B-205ENST00000404914 TSPY10P0CW01 314 aa20.26■□□□□ 0.83
ATG4B-205ENST00000404914 TSPOAP1O95153 1857 aa20.26■□□□□ 0.83
ATG4B-205ENST00000404914 PLA2R1Q13018 1463 aa20.25■□□□□ 0.83
ATG4B-205ENST00000404914 CD109Q6YHK3 1445 aa20.24■□□□□ 0.83
ATG4B-205ENST00000404914 ERBINQ96RT1 1412 aa20.24■□□□□ 0.83
ATG4B-205ENST00000404914 PLEKHH2Q8IVE3 1493 aa20.24■□□□□ 0.83
ATG4B-205ENST00000404914 CCDC144AA2RUR9 1427 aa20.24■□□□□ 0.83
ATG4B-205ENST00000404914 INSRP06213 1382 aa20.24■□□□□ 0.83
ATG4B-205ENST00000404914 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
ATG4B-205ENST00000404914 PRDM15P57071 1507 aaPredicted RBP20.23■□□□□ 0.83
ATG4B-205ENST00000404914 MAP3K4Q9Y6R4 1608 aa20.23■□□□□ 0.83
ATG4B-205ENST00000404914 SPINK5Q9NQ38 1064 aaPredicted RBP20.23■□□□□ 0.83
ATG4B-205ENST00000404914 ZNF521Q96K83 1311 aa20.22■□□□□ 0.83
ATG4B-205ENST00000404914 EIF5BO60841 1220 aaKnown RBP20.22■□□□□ 0.83
ATG4B-205ENST00000404914 MAGI2Q86UL8 1455 aa20.21■□□□□ 0.83
ATG4B-205ENST00000404914 GLI2P10070 1586 aa20.2■□□□□ 0.83
ATG4B-205ENST00000404914 PPP2R1AP30153 589 aa20.2■□□□□ 0.83
ATG4B-205ENST00000404914 FANCAO15360 1455 aa20.2■□□□□ 0.82
ATG4B-205ENST00000404914 USP19O94966 1318 aa20.2■□□□□ 0.82
ATG4B-205ENST00000404914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.2■□□□□ 0.826e-14■■□□□ 12
ATG4B-205ENST00000404914 CCDC146Q8IYE0 955 aa20.19■□□□□ 0.82
ATG4B-205ENST00000404914 SYCP2Q9BX26 1530 aa20.19■□□□□ 0.82
ATG4B-205ENST00000404914 BCAR3O75815 825 aa20.18■□□□□ 0.82
ATG4B-205ENST00000404914 SEC24BO95487 1268 aa20.18■□□□□ 0.82
ATG4B-205ENST00000404914 GOLGA2Q08379 1002 aa20.18■□□□□ 0.82
ATG4B-205ENST00000404914 PPRC1Q5VV67 1664 aaKnown RBP20.18■□□□□ 0.82
ATG4B-205ENST00000404914 IGHDP01880 384 aa20.17■□□□□ 0.82
ATG4B-205ENST00000404914 TMF1P82094 1093 aa20.17■□□□□ 0.82
ATG4B-205ENST00000404914 EFCAB2Q5VUJ9 269 aa20.17■□□□□ 0.82
ATG4B-205ENST00000404914 POGKQ9P215 609 aa20.17■□□□□ 0.82
ATG4B-205ENST00000404914 SLFN5Q08AF3 891 aa20.16■□□□□ 0.82
ATG4B-205ENST00000404914 WDR43Q15061 677 aaKnown RBP eCLIP20.16■□□□□ 0.82
ATG4B-205ENST00000404914 ARAP3Q8WWN8 1544 aa20.15■□□□□ 0.82
ATG4B-205ENST00000404914 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
ATG4B-205ENST00000404914 ABCC1P33527 1531 aa20.13■□□□□ 0.81
ATG4B-205ENST00000404914 LAMC1P11047 1609 aa20.13■□□□□ 0.81
ATG4B-205ENST00000404914 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
ATG4B-205ENST00000404914 AMER1Q5JTC6 1135 aaPredicted RBP20.13■□□□□ 0.81
ATG4B-205ENST00000404914 TRAPPC8Q9Y2L5 1435 aa20.11■□□□□ 0.81
ATG4B-205ENST00000404914 UBE2Q2Q8WVN8 375 aa20.11■□□□□ 0.81
ATG4B-205ENST00000404914 ARHGEF5Q12774 1597 aa20.1■□□□□ 0.81
ATG4B-205ENST00000404914 ADGRL1O94910 1474 aa20.1■□□□□ 0.81
ATG4B-205ENST00000404914 TRMT2AQ8IZ69 625 aaKnown RBP20.1■□□□□ 0.81
ATG4B-205ENST00000404914 SLKQ9H2G2 1235 aaPredicted RBP20.1■□□□□ 0.81
ATG4B-205ENST00000404914 KNSTRNQ9Y448 316 aa20.1■□□□□ 0.81
ATG4B-205ENST00000404914 APAF1O14727 1248 aa20.09■□□□□ 0.81
ATG4B-205ENST00000404914 AFAP1Q8N556 730 aa20.09■□□□□ 0.81
ATG4B-205ENST00000404914 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.09■□□□□ 0.81
ATG4B-205ENST00000404914 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
ATG4B-205ENST00000404914 SCAPERQ9BY12 1400 aa20.08■□□□□ 0.81
ATG4B-205ENST00000404914 FAM43AQ8N2R8 423 aa20.08■□□□□ 0.8
ATG4B-205ENST00000404914 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.8
ATG4B-205ENST00000404914 EIF3AQ14152 1382 aaKnown RBP20.07■□□□□ 0.8
ATG4B-205ENST00000404914 RRAGDQ9NQL2 400 aaPredicted RBP20.05■□□□□ 0.8
ATG4B-205ENST00000404914 PANK1Q8TE04 598 aa20.05■□□□□ 0.8
ATG4B-205ENST00000404914 NLRP1Q9C000 1473 aa20.04■□□□□ 0.8
ATG4B-205ENST00000404914 RAPGEF3O95398 923 aa20.04■□□□□ 0.8
ATG4B-205ENST00000404914 NKTRP30414 1462 aaKnown RBP20.04■□□□□ 0.8
ATG4B-205ENST00000404914 RNF17Q9BXT8 1623 aaKnown RBP20.04■□□□□ 0.8
ATG4B-205ENST00000404914 UNC13BO14795 1591 aa20.03■□□□□ 0.8
ATG4B-205ENST00000404914 CFAP74Q9C0B2 1584 aa20.03■□□□□ 0.8
ATG4B-205ENST00000404914 EIF2AK4Q9P2K8 1649 aaKnown RBP20.03■□□□□ 0.8
ATG4B-205ENST00000404914 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
ATG4B-205ENST00000404914 NEO1Q92859 1461 aa20.03■□□□□ 0.8
ATG4B-205ENST00000404914 ARXQ96QS3 562 aa20.02■□□□□ 0.8
ATG4B-205ENST00000404914 TNNQ9UQP3 1299 aa20■□□□□ 0.79
ATG4B-205ENST00000404914 ANTXR1Q9H6X2 564 aa19.99■□□□□ 0.79
ATG4B-205ENST00000404914 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
ATG4B-205ENST00000404914 PIK3C2GO75747 1445 aa19.98■□□□□ 0.79
ATG4B-205ENST00000404914 MYOM1P52179 1685 aa19.98■□□□□ 0.79
ATG4B-205ENST00000404914 POGZQ7Z3K3 1410 aa19.97■□□□□ 0.79
ATG4B-205ENST00000404914 IQGAP3Q86VI3 1631 aa19.97■□□□□ 0.79
ATG4B-205ENST00000404914 RICTORQ6R327 1708 aa19.97■□□□□ 0.79
ATG4B-205ENST00000404914 CLUAP1Q96AJ1 413 aa19.97■□□□□ 0.79
ATG4B-205ENST00000404914 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
ATG4B-205ENST00000404914 RSPH6AQ9H0K4 717 aa19.97■□□□□ 0.79
ATG4B-205ENST00000404914 FRMPD1Q5SYB0 1578 aa19.96■□□□□ 0.79
ATG4B-205ENST00000404914 SYNMO15061 1565 aa19.95■□□□□ 0.78
ATG4B-205ENST00000404914 SPRYD3Q8NCJ5 442 aa19.95■□□□□ 0.78
ATG4B-205ENST00000404914 ZFYVE16Q7Z3T8 1539 aa19.94■□□□□ 0.78
ATG4B-205ENST00000404914 E9PSI1 815 aa19.94■□□□□ 0.78
ATG4B-205ENST00000404914 RSPH4AQ5TD94 716 aa19.94■□□□□ 0.78
ATG4B-205ENST00000404914 ZNF518AQ6AHZ1 1483 aa19.94■□□□□ 0.78
ATG4B-205ENST00000404914 MADDQ8WXG6 1647 aa19.94■□□□□ 0.78
ATG4B-205ENST00000404914 SPAG9O60271 1321 aaKnown RBP19.94■□□□□ 0.78
ATG4B-205ENST00000404914 KIDINS220Q9ULH0 1771 aa19.93■□□□□ 0.78
ATG4B-205ENST00000404914 MAST1Q9Y2H9 1570 aa19.93■□□□□ 0.78
ATG4B-205ENST00000404914 TBC1D2Q9BYX2 928 aa19.93■□□□□ 0.78
ATG4B-205ENST00000404914 PCDHB15Q9Y5E8 787 aa19.93■□□□□ 0.78
ATG4B-205ENST00000404914 INO80Q9ULG1 1556 aaPredicted RBP19.92■□□□□ 0.78
ATG4B-205ENST00000404914 CGNL1Q0VF96 1302 aa19.92■□□□□ 0.78
ATG4B-205ENST00000404914 RLBP1P12271 317 aa19.92■□□□□ 0.78
ATG4B-205ENST00000404914 CENPJQ9HC77 1338 aaPredicted RBP19.92■□□□□ 0.78
ATG4B-205ENST00000404914 BECN1Q14457 450 aa19.91■□□□□ 0.78
ATG4B-205ENST00000404914 CANXP27824 592 aaKnown RBP19.91■□□□□ 0.78
ATG4B-205ENST00000404914 PDE3AQ14432 1141 aa19.91■□□□□ 0.78
ATG4B-205ENST00000404914 MAPK8IP3Q9UPT6 1336 aa19.91■□□□□ 0.78
ATG4B-205ENST00000404914 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
ATG4B-205ENST00000404914 ATP10AO60312 1499 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms