RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 RNF17Q9BXT8 1623 aaKnown RBP12.62□□□□□ -0.39
CBX1-203ENST00000402583 NBPF1Q3BBV0 1214 aa12.62□□□□□ -0.39
CBX1-203ENST00000402583 TMC1Q8TDI8 760 aa12.62□□□□□ -0.39
CBX1-203ENST00000402583 CEP152O94986 1710 aa12.62□□□□□ -0.39
CBX1-203ENST00000402583 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
CBX1-203ENST00000402583 CDCA8Q53HL2 280 aa12.61□□□□□ -0.39
CBX1-203ENST00000402583 LMTK2Q8IWU2 1503 aa12.61□□□□□ -0.39
CBX1-203ENST00000402583 POGZQ7Z3K3 1410 aa12.61□□□□□ -0.39
CBX1-203ENST00000402583 MLH3Q9UHC1 1453 aa12.6□□□□□ -0.39
CBX1-203ENST00000402583 MADDQ8WXG6 1647 aa12.6□□□□□ -0.39
CBX1-203ENST00000402583 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
CBX1-203ENST00000402583 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
CBX1-203ENST00000402583 NEO1Q92859 1461 aa12.59□□□□□ -0.39
CBX1-203ENST00000402583 EFCAB6Q5THR3 1501 aa12.58□□□□□ -0.4
CBX1-203ENST00000402583 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
CBX1-203ENST00000402583 BCANQ96GW7 911 aa12.58□□□□□ -0.4
CBX1-203ENST00000402583 TESK2Q96S53 571 aa12.58□□□□□ -0.4
CBX1-203ENST00000402583 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.4
CBX1-203ENST00000402583 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
CBX1-203ENST00000402583 KIDINS220Q9ULH0 1771 aa12.57□□□□□ -0.4
CBX1-203ENST00000402583 NLRP13Q86W25 1043 aa12.57□□□□□ -0.4
CBX1-203ENST00000402583 PNISRQ8TF01 805 aaKnown RBP12.57□□□□□ -0.4
CBX1-203ENST00000402583 MYOM2P54296 1465 aa12.57□□□□□ -0.4
CBX1-203ENST00000402583 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
CBX1-203ENST00000402583 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
CBX1-203ENST00000402583 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
CBX1-203ENST00000402583 KIAA1210Q9ULL0 1709 aa12.56□□□□□ -0.4
CBX1-203ENST00000402583 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
CBX1-203ENST00000402583 SMG6Q86US8 1419 aaKnown RBP12.55□□□□□ -0.4
CBX1-203ENST00000402583 CNGB1Q14028 1251 aaPredicted RBP12.54□□□□□ -0.4
CBX1-203ENST00000402583 IQGAP1P46940 1657 aa12.54□□□□□ -0.4
CBX1-203ENST00000402583 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
CBX1-203ENST00000402583 PER1O15534 1290 aaPredicted RBP12.53□□□□□ -0.4
CBX1-203ENST00000402583 INSRP06213 1382 aa12.53□□□□□ -0.4
CBX1-203ENST00000402583 PPRC1Q5VV67 1664 aaKnown RBP12.51□□□□□ -0.41
CBX1-203ENST00000402583 PANK3Q9H999 370 aa12.51□□□□□ -0.41
CBX1-203ENST00000402583 PPP4R2Q9NY27 417 aa12.51□□□□□ -0.41
CBX1-203ENST00000402583 NUDCQ9Y266 331 aa12.51□□□□□ -0.41
CBX1-203ENST00000402583 ZMYM4Q5VZL5 1548 aa12.51□□□□□ -0.41
CBX1-203ENST00000402583 MAP3K4Q9Y6R4 1608 aa12.51□□□□□ -0.41
CBX1-203ENST00000402583 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
CBX1-203ENST00000402583 SYNMO15061 1565 aa12.5□□□□□ -0.41
CBX1-203ENST00000402583 KIF1BO60333 1816 aa12.49□□□□□ -0.41
CBX1-203ENST00000402583 FRMPD1Q5SYB0 1578 aa12.49□□□□□ -0.41
CBX1-203ENST00000402583 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
CBX1-203ENST00000402583 ADGRB3O60242 1522 aa12.48□□□□□ -0.41
CBX1-203ENST00000402583 NRXN1Q9ULB1 1477 aa12.48□□□□□ -0.41
CBX1-203ENST00000402583 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
CBX1-203ENST00000402583 KNSTRNQ9Y448 316 aa12.48□□□□□ -0.41
CBX1-203ENST00000402583 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
CBX1-203ENST00000402583 GGT6Q6P531 493 aa12.47□□□□□ -0.41
CBX1-203ENST00000402583 GLI2P10070 1586 aa12.47□□□□□ -0.41
CBX1-203ENST00000402583 ABCC3O15438 1527 aa12.47□□□□□ -0.41
CBX1-203ENST00000402583 NPATQ14207 1427 aa12.46□□□□□ -0.41
CBX1-203ENST00000402583 UGGT1Q9NYU2 1555 aa12.46□□□□□ -0.42
CBX1-203ENST00000402583 SETBP1Q9Y6X0 1596 aa12.46□□□□□ -0.42
CBX1-203ENST00000402583 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
CBX1-203ENST00000402583 CC2D1BQ5T0F9 858 aaKnown RBP12.45□□□□□ -0.42
CBX1-203ENST00000402583 IFT172Q9UG01 1749 aa12.45□□□□□ -0.42
CBX1-203ENST00000402583 SBNO2Q9Y2G9 1366 aa12.44□□□□□ -0.42
CBX1-203ENST00000402583 DIP2CQ9Y2E4 1556 aa12.44□□□□□ -0.42
CBX1-203ENST00000402583 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
CBX1-203ENST00000402583 ZC3H13Q5T200 1668 aaKnown RBP12.44□□□□□ -0.42
CBX1-203ENST00000402583 ARHGAP31Q2M1Z3 1444 aa12.44□□□□□ -0.42
CBX1-203ENST00000402583 ADGRF5Q8IZF2 1346 aa12.43□□□□□ -0.42
CBX1-203ENST00000402583 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
CBX1-203ENST00000402583 KDM5AP29375 1690 aaKnown RBP12.43□□□□□ -0.42
CBX1-203ENST00000402583 IRX6P78412 446 aaPredicted RBP12.43□□□□□ -0.42
CBX1-203ENST00000402583 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
CBX1-203ENST00000402583 PROM2Q8N271 834 aa12.43□□□□□ -0.42
CBX1-203ENST00000402583 NOS1P29475 1434 aa12.43□□□□□ -0.42
CBX1-203ENST00000402583 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
CBX1-203ENST00000402583 CAMSAP1Q5T5Y3 1602 aa12.42□□□□□ -0.42
CBX1-203ENST00000402583 MYO3AQ8NEV4 1616 aa12.42□□□□□ -0.42
CBX1-203ENST00000402583 SPDYE2BA6NHP3 402 aa12.42□□□□□ -0.42
CBX1-203ENST00000402583 RAPGEF3O95398 923 aa12.42□□□□□ -0.42
CBX1-203ENST00000402583 SPDYE6P0CI01 402 aa12.42□□□□□ -0.42
CBX1-203ENST00000402583 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
CBX1-203ENST00000402583 RNF123Q5XPI4 1314 aa12.41□□□□□ -0.42
CBX1-203ENST00000402583 PIK3C2GO75747 1445 aa12.41□□□□□ -0.42
CBX1-203ENST00000402583 BLMP54132 1417 aaPredicted RBP12.41□□□□□ -0.42
CBX1-203ENST00000402583 CENPJQ9HC77 1338 aaPredicted RBP12.4□□□□□ -0.42
CBX1-203ENST00000402583 VGFO15240 615 aaPredicted RBP12.4□□□□□ -0.42
CBX1-203ENST00000402583 C14orf93Q9H972 538 aaKnown RBP12.4□□□□□ -0.42
CBX1-203ENST00000402583 ERVK-7P63135 1459 aa12.4□□□□□ -0.43
CBX1-203ENST00000402583 RICTORQ6R327 1708 aa12.4□□□□□ -0.43
CBX1-203ENST00000402583 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
CBX1-203ENST00000402583 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
CBX1-203ENST00000402583 SLC52A1Q9NWF4 448 aa12.39□□□□□ -0.43
CBX1-203ENST00000402583 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
CBX1-203ENST00000402583 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
CBX1-203ENST00000402583 PPLO60437 1756 aa12.38□□□□□ -0.43
CBX1-203ENST00000402583 PIK3C2BO00750 1634 aa12.37□□□□□ -0.43
CBX1-203ENST00000402583 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
CBX1-203ENST00000402583 PUS7Q96PZ0 661 aaKnown RBP12.37□□□□□ -0.43
CBX1-203ENST00000402583 MYOM1P52179 1685 aa12.36□□□□□ -0.43
CBX1-203ENST00000402583 ZFYVE9O95405 1425 aa12.36□□□□□ -0.43
CBX1-203ENST00000402583 MYT1Q01538 1121 aa12.35□□□□□ -0.43
CBX1-203ENST00000402583 ADGRB1O14514 1584 aa12.35□□□□□ -0.43
CBX1-203ENST00000402583 RIMBP3CA6NJZ7 1639 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms