RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.48
GAPVD1-204ENST00000394083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.484e-9■□□□□ 10.4
GAPVD1-204ENST00000394083 KDM2AQ9Y2K7 1162 aa12.03□□□□□ -0.48
GAPVD1-204ENST00000394083 SPAG9O60271 1321 aaKnown RBP12.03□□□□□ -0.48
GAPVD1-204ENST00000394083 REREQ9P2R6 1566 aa12.02□□□□□ -0.48
GAPVD1-204ENST00000394083 NEO1Q92859 1461 aa12.02□□□□□ -0.48
GAPVD1-204ENST00000394083 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
GAPVD1-204ENST00000394083 RGL3Q3MIN7 710 aa12.02□□□□□ -0.49
GAPVD1-204ENST00000394083 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
GAPVD1-204ENST00000394083 RSPH4AQ5TD94 716 aa12.01□□□□□ -0.49
GAPVD1-204ENST00000394083 PARD3Q8TEW0 1356 aa12.01□□□□□ -0.49
GAPVD1-204ENST00000394083 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
GAPVD1-204ENST00000394083 KDM5AP29375 1690 aaKnown RBP11.99□□□□□ -0.49
GAPVD1-204ENST00000394083 MARF1Q9Y4F3 1742 aaKnown RBP11.98□□□□□ -0.49
GAPVD1-204ENST00000394083 ZNF326Q5BKZ1 582 aaKnown RBP11.96□□□□□ -0.49
GAPVD1-204ENST00000394083 UBR1Q8IWV7 1749 aa11.96□□□□□ -0.5
GAPVD1-204ENST00000394083 ROCK2O75116 1388 aaKnown RBP11.96□□□□□ -0.5
GAPVD1-204ENST00000394083 CYB5RLQ6IPT4 315 aa11.95□□□□□ -0.5
GAPVD1-204ENST00000394083 CARD14Q9BXL6 1004 aa11.95□□□□□ -0.5
GAPVD1-204ENST00000394083 NLRP1Q9C000 1473 aa11.95□□□□□ -0.5
GAPVD1-204ENST00000394083 KIF3BO15066 747 aa11.95□□□□□ -0.5
GAPVD1-204ENST00000394083 SPATA31D1Q6ZQQ2 1576 aa11.95□□□□□ -0.5
GAPVD1-204ENST00000394083 PNISRQ8TF01 805 aaKnown RBP11.95□□□□□ -0.5
GAPVD1-204ENST00000394083 ARHGEF40Q8TER5 1519 aa11.95□□□□□ -0.5
GAPVD1-204ENST00000394083 RGPD8O14715 1765 aaPredicted RBP11.95□□□□□ -0.5
GAPVD1-204ENST00000394083 UTRNP46939 3433 aa11.94□□□□□ -0.5
GAPVD1-204ENST00000394083 ARHGAP31Q2M1Z3 1444 aa11.92□□□□□ -0.5
GAPVD1-204ENST00000394083 CFAP70Q5T0N1 1121 aa11.92□□□□□ -0.5
GAPVD1-204ENST00000394083 CARD11Q9BXL7 1154 aa11.92□□□□□ -0.5
GAPVD1-204ENST00000394083 ANKRD26Q9UPS8 1709 aa11.91□□□□□ -0.5
GAPVD1-204ENST00000394083 C3P01024 1663 aa11.91□□□□□ -0.5
GAPVD1-204ENST00000394083 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-204ENST00000394083 EP400Q96L91 3159 aa11.91□□□□□ -0.5
GAPVD1-204ENST00000394083 USP32Q8NFA0 1604 aa11.91□□□□□ -0.5
GAPVD1-204ENST00000394083 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.91□□□□□ -0.5
GAPVD1-204ENST00000394083 SCAF11Q99590 1463 aaKnown RBP11.9□□□□□ -0.5
GAPVD1-204ENST00000394083 AGLP35573 1532 aa11.89□□□□□ -0.51
GAPVD1-204ENST00000394083 FBXO31Q5XUX0 539 aaPredicted RBP11.89□□□□□ -0.51
GAPVD1-204ENST00000394083 ALKQ9UM73 1620 aa11.88□□□□□ -0.51
GAPVD1-204ENST00000394083 RNF123Q5XPI4 1314 aa11.87□□□□□ -0.51
GAPVD1-204ENST00000394083 BLMP54132 1417 aaPredicted RBP11.87□□□□□ -0.51
GAPVD1-204ENST00000394083 ZFYVE9O95405 1425 aa11.87□□□□□ -0.51
GAPVD1-204ENST00000394083 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
GAPVD1-204ENST00000394083 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
GAPVD1-204ENST00000394083 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
GAPVD1-204ENST00000394083 IDI1Q13907 227 aa11.85□□□□□ -0.51
GAPVD1-204ENST00000394083 NUTM2DQ5VT03 806 aaPredicted RBP11.84□□□□□ -0.51
GAPVD1-204ENST00000394083 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
GAPVD1-204ENST00000394083 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
GAPVD1-204ENST00000394083 KNDC1Q76NI1 1749 aa11.84□□□□□ -0.51
GAPVD1-204ENST00000394083 DLG5Q8TDM6 1919 aa11.84□□□□□ -0.51
GAPVD1-204ENST00000394083 TMEM132EQ6IEE7 984 aa11.83□□□□□ -0.52
GAPVD1-204ENST00000394083 PLEKHH1Q9ULM0 1364 aa11.83□□□□□ -0.52
GAPVD1-204ENST00000394083 MAP2P11137 1827 aaKnown RBP11.83□□□□□ -0.52
GAPVD1-204ENST00000394083 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
GAPVD1-204ENST00000394083 ANP32CO43423 234 aa11.82□□□□□ -0.52
GAPVD1-204ENST00000394083 KIF20BQ96Q89 1820 aa11.82□□□□□ -0.52
GAPVD1-204ENST00000394083 IRX6P78412 446 aaPredicted RBP11.82□□□□□ -0.52
GAPVD1-204ENST00000394083 COL3A1P02461 1466 aaPredicted RBP11.82□□□□□ -0.52
GAPVD1-204ENST00000394083 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
GAPVD1-204ENST00000394083 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
GAPVD1-204ENST00000394083 CNGB1Q14028 1251 aaPredicted RBP11.81□□□□□ -0.52
GAPVD1-204ENST00000394083 PANK3Q9H999 370 aa11.81□□□□□ -0.52
GAPVD1-204ENST00000394083 ZNF521Q96K83 1311 aa11.81□□□□□ -0.52
GAPVD1-204ENST00000394083 MON2Q7Z3U7 1717 aa11.81□□□□□ -0.52
GAPVD1-204ENST00000394083 MED14O60244 1454 aa11.8□□□□□ -0.52
GAPVD1-204ENST00000394083 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
GAPVD1-204ENST00000394083 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
GAPVD1-204ENST00000394083 SBNO2Q9Y2G9 1366 aa11.79□□□□□ -0.52
GAPVD1-204ENST00000394083 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
GAPVD1-204ENST00000394083 GGT6Q6P531 493 aa11.79□□□□□ -0.52
GAPVD1-204ENST00000394083 CDCA7LQ96GN5 454 aa11.78□□□□□ -0.52
GAPVD1-204ENST00000394083 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
GAPVD1-204ENST00000394083 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
GAPVD1-204ENST00000394083 C14orf93Q9H972 538 aaKnown RBP11.78□□□□□ -0.52
GAPVD1-204ENST00000394083 HNRNPUQ00839 825 aaKnown RBP eCLIP11.77□□□□□ -0.52
GAPVD1-204ENST00000394083 ADGRB2O60241 1585 aa11.77□□□□□ -0.53
GAPVD1-204ENST00000394083 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
GAPVD1-204ENST00000394083 SENP3Q9H4L4 574 aaPredicted RBP11.77□□□□□ -0.53
GAPVD1-204ENST00000394083 FER1L4A9Z1Z3 1794 aa11.76□□□□□ -0.53
GAPVD1-204ENST00000394083 DLC1Q96QB1 1528 aa11.76□□□□□ -0.53
GAPVD1-204ENST00000394083 NALCNQ8IZF0 1738 aa11.76□□□□□ -0.53
GAPVD1-204ENST00000394083 SMG6Q86US8 1419 aaKnown RBP11.76□□□□□ -0.53
GAPVD1-204ENST00000394083 RIMS1Q86UR5 1692 aaKnown RBP11.75□□□□□ -0.53
GAPVD1-204ENST00000394083 BCANQ96GW7 911 aa11.75□□□□□ -0.53
GAPVD1-204ENST00000394083 MRS2Q9HD23 443 aa11.75□□□□□ -0.53
GAPVD1-204ENST00000394083 METP08581 1390 aa11.74□□□□□ -0.53
GAPVD1-204ENST00000394083 FKBP8Q14318 412 aa11.74□□□□□ -0.53
GAPVD1-204ENST00000394083 PTPRUQ92729 1446 aa11.73□□□□□ -0.53
GAPVD1-204ENST00000394083 STRCP1A6NGW2 1772 aa11.73□□□□□ -0.53
GAPVD1-204ENST00000394083 CPS1P31327 1500 aa11.73□□□□□ -0.53
GAPVD1-204ENST00000394083 BRD4O60885 1362 aaPredicted RBP11.73□□□□□ -0.53
GAPVD1-204ENST00000394083 SKAP1Q86WV1 359 aa11.73□□□□□ -0.53
GAPVD1-204ENST00000394083 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
GAPVD1-204ENST00000394083 ADAMTS13Q76LX8 1427 aa11.72□□□□□ -0.53
GAPVD1-204ENST00000394083 CC2D1BQ5T0F9 858 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-204ENST00000394083 NKTRP30414 1462 aaKnown RBP11.72□□□□□ -0.53
GAPVD1-204ENST00000394083 NCKAP5LQ9HCH0 1330 aa11.72□□□□□ -0.53
GAPVD1-204ENST00000394083 MYBBP1AQ9BQG0 1328 aaKnown RBP11.71□□□□□ -0.53
GAPVD1-204ENST00000394083 XRN1Q8IZH2 1706 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms