RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 TCERG1O14776 1098 aaKnown RBP19.91■□□□□ 0.78
SHTN1-204ENST00000392903 PARD3Q8TEW0 1356 aa19.9■□□□□ 0.78
SHTN1-204ENST00000392903 NLRP13Q86W25 1043 aa19.9■□□□□ 0.78
SHTN1-204ENST00000392903 VWDEQ8N2E2 1590 aa19.89■□□□□ 0.78
SHTN1-204ENST00000392903 NEFMP07197 916 aa19.89■□□□□ 0.77
SHTN1-204ENST00000392903 GGT6Q6P531 493 aa19.89■□□□□ 0.77
SHTN1-204ENST00000392903 MROH1Q8NDA8 1641 aa19.88■□□□□ 0.77
SHTN1-204ENST00000392903 RNF17Q9BXT8 1623 aaKnown RBP19.88■□□□□ 0.77
SHTN1-204ENST00000392903 ZNF518AQ6AHZ1 1483 aa19.88■□□□□ 0.77
SHTN1-204ENST00000392903 LRPPRCP42704 1394 aaKnown RBP19.88■□□□□ 0.77
SHTN1-204ENST00000392903 PPM1GO15355 546 aaPredicted RBP19.86■□□□□ 0.77
SHTN1-204ENST00000392903 CFAP70Q5T0N1 1121 aa19.86■□□□□ 0.77
SHTN1-204ENST00000392903 CFAP65Q6ZU64 1925 aaKnown RBP19.86■□□□□ 0.77
SHTN1-204ENST00000392903 CHGAP10645 457 aaKnown RBP19.86■□□□□ 0.77
SHTN1-204ENST00000392903 RTN4Q9NQC3 1192 aaKnown RBP19.86■□□□□ 0.77
SHTN1-204ENST00000392903 STAC3Q96MF2 364 aa19.85■□□□□ 0.77
SHTN1-204ENST00000392903 ADGRF5Q8IZF2 1346 aa19.85■□□□□ 0.77
SHTN1-204ENST00000392903 RAPGEF3O95398 923 aa19.84■□□□□ 0.77
SHTN1-204ENST00000392903 MS4A1P11836 297 aa19.84■□□□□ 0.77
SHTN1-204ENST00000392903 PDE4AP27815 886 aa19.83■□□□□ 0.77
SHTN1-204ENST00000392903 NPM2Q86SE8 214 aaKnown RBP19.83■□□□□ 0.76
SHTN1-204ENST00000392903 BACH2Q9BYV9 841 aa19.83■□□□□ 0.76
SHTN1-204ENST00000392903 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.76
SHTN1-204ENST00000392903 SCAF11Q99590 1463 aaKnown RBP19.82■□□□□ 0.76
SHTN1-204ENST00000392903 IQGAP1P46940 1657 aa19.82■□□□□ 0.76
SHTN1-204ENST00000392903 POGZQ7Z3K3 1410 aa19.81■□□□□ 0.76
SHTN1-204ENST00000392903 EFCAB6Q5THR3 1501 aa19.8■□□□□ 0.76
SHTN1-204ENST00000392903 PPRC1Q5VV67 1664 aaKnown RBP19.8■□□□□ 0.76
SHTN1-204ENST00000392903 RRP1P56182 461 aaKnown RBP19.8■□□□□ 0.76
SHTN1-204ENST00000392903 KNSTRNQ9Y448 316 aa19.8■□□□□ 0.76
SHTN1-204ENST00000392903 KIF1BO60333 1816 aa19.78■□□□□ 0.76
SHTN1-204ENST00000392903 CDCA8Q53HL2 280 aa19.77■□□□□ 0.76
SHTN1-204ENST00000392903 EXOC6Q8TAG9 804 aa19.76■□□□□ 0.75
SHTN1-204ENST00000392903 EIF3AQ14152 1382 aaKnown RBP19.75■□□□□ 0.75
SHTN1-204ENST00000392903 MLH3Q9UHC1 1453 aa19.75■□□□□ 0.75
SHTN1-204ENST00000392903 FRMPD1Q5SYB0 1578 aa19.74■□□□□ 0.75
SHTN1-204ENST00000392903 MAP3K4Q9Y6R4 1608 aa19.74■□□□□ 0.75
SHTN1-204ENST00000392903 NPATQ14207 1427 aa19.74■□□□□ 0.75
SHTN1-204ENST00000392903 MROH2AA6NES4 1674 aa19.74■□□□□ 0.75
SHTN1-204ENST00000392903 CYB5RLQ6IPT4 315 aa19.74■□□□□ 0.75
SHTN1-204ENST00000392903 UBE2Q2Q8WVN8 375 aa19.74■□□□□ 0.75
SHTN1-204ENST00000392903 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.73■□□□□ 0.75
SHTN1-204ENST00000392903 CFAP74Q9C0B2 1584 aa19.73■□□□□ 0.75
SHTN1-204ENST00000392903 HECW2Q9P2P5 1572 aa19.73■□□□□ 0.75
SHTN1-204ENST00000392903 AMER1Q5JTC6 1135 aaPredicted RBP19.73■□□□□ 0.75
SHTN1-204ENST00000392903 ABCA6Q8N139 1617 aa19.72■□□□□ 0.75
SHTN1-204ENST00000392903 CDCA7LQ96GN5 454 aa19.72■□□□□ 0.75
SHTN1-204ENST00000392903 DDRGK1Q96HY6 314 aa19.72■□□□□ 0.75
SHTN1-204ENST00000392903 NOS1P29475 1434 aa19.72■□□□□ 0.75
SHTN1-204ENST00000392903 GSE1Q14687 1217 aa19.71■□□□□ 0.75
SHTN1-204ENST00000392903 NUTM2DQ5VT03 806 aaPredicted RBP19.71■□□□□ 0.75
SHTN1-204ENST00000392903 LMTK2Q8IWU2 1503 aa19.71■□□□□ 0.75
SHTN1-204ENST00000392903 MYOM2P54296 1465 aa19.71■□□□□ 0.75
SHTN1-204ENST00000392903 PPP2R1AP30153 589 aa19.71■□□□□ 0.75
SHTN1-204ENST00000392903 RCAN3Q9UKA8 241 aa19.71■□□□□ 0.75
SHTN1-204ENST00000392903 ADAMTS8Q9UP79 889 aa19.7■□□□□ 0.74
SHTN1-204ENST00000392903 KIAA1210Q9ULL0 1709 aa19.7■□□□□ 0.74
SHTN1-204ENST00000392903 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
SHTN1-204ENST00000392903 NEURL4Q96JN8 1562 aa19.69■□□□□ 0.74
SHTN1-204ENST00000392903 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
SHTN1-204ENST00000392903 SENP3Q9H4L4 574 aaPredicted RBP19.68■□□□□ 0.74
SHTN1-204ENST00000392903 BRPF3Q9ULD4 1205 aa19.67■□□□□ 0.74
SHTN1-204ENST00000392903 IFT172Q9UG01 1749 aa19.67■□□□□ 0.74
SHTN1-204ENST00000392903 SYNMO15061 1565 aa19.66■□□□□ 0.74
SHTN1-204ENST00000392903 NEO1Q92859 1461 aa19.65■□□□□ 0.74
SHTN1-204ENST00000392903 PDE3BQ13370 1112 aa19.65■□□□□ 0.74
SHTN1-204ENST00000392903 ERVK-7P63135 1459 aa19.65■□□□□ 0.74
SHTN1-204ENST00000392903 MYOM1P52179 1685 aa19.65■□□□□ 0.74
SHTN1-204ENST00000392903 ADGRB3O60242 1522 aa19.64■□□□□ 0.74
SHTN1-204ENST00000392903 ABCC3O15438 1527 aa19.64■□□□□ 0.73
SHTN1-204ENST00000392903 KDM5AP29375 1690 aaKnown RBP19.64■□□□□ 0.73
SHTN1-204ENST00000392903 WDR43Q15061 677 aaKnown RBP eCLIP19.63■□□□□ 0.73
SHTN1-204ENST00000392903 CARD14Q9BXL6 1004 aa19.63■□□□□ 0.73
SHTN1-204ENST00000392903 ASXL1Q8IXJ9 1541 aa19.63■□□□□ 0.73
SHTN1-204ENST00000392903 NFKBIBQ15653 356 aa19.63■□□□□ 0.73
SHTN1-204ENST00000392903 NRXN1Q9ULB1 1477 aa19.62■□□□□ 0.73
SHTN1-204ENST00000392903 C14orf93Q9H972 538 aaKnown RBP19.62■□□□□ 0.73
SHTN1-204ENST00000392903 BLMP54132 1417 aaPredicted RBP19.62■□□□□ 0.73
SHTN1-204ENST00000392903 CENPJQ9HC77 1338 aaPredicted RBP19.62■□□□□ 0.73
SHTN1-204ENST00000392903 YEATS2Q9ULM3 1422 aa19.61■□□□□ 0.73
SHTN1-204ENST00000392903 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
SHTN1-204ENST00000392903 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
SHTN1-204ENST00000392903 DIP2CQ9Y2E4 1556 aa19.59■□□□□ 0.73
SHTN1-204ENST00000392903 SIGLEC1Q9BZZ2 1709 aa19.59■□□□□ 0.73
SHTN1-204ENST00000392903 PPLO60437 1756 aa19.59■□□□□ 0.73
SHTN1-204ENST00000392903 CAMSAP1Q5T5Y3 1602 aa19.58■□□□□ 0.73
SHTN1-204ENST00000392903 IDI1Q13907 227 aa19.57■□□□□ 0.72
SHTN1-204ENST00000392903 FRAT1Q92837 279 aaPredicted RBP19.57■□□□□ 0.72
SHTN1-204ENST00000392903 FAM69CQ0P6D2 419 aa19.57■□□□□ 0.72
SHTN1-204ENST00000392903 SLC12A5Q9H2X9 1139 aa19.56■□□□□ 0.72
SHTN1-204ENST00000392903 RPGRIP1LQ68CZ1 1315 aa19.56■□□□□ 0.72
SHTN1-204ENST00000392903 RICTORQ6R327 1708 aa19.56■□□□□ 0.72
SHTN1-204ENST00000392903 PLIN1O60240 522 aa19.56■□□□□ 0.72
SHTN1-204ENST00000392903 CCDC146Q8IYE0 955 aa19.56■□□□□ 0.72
SHTN1-204ENST00000392903 INSRP06213 1382 aa19.55■□□□□ 0.72
SHTN1-204ENST00000392903 VGFO15240 615 aaPredicted RBP19.54■□□□□ 0.72
SHTN1-204ENST00000392903 NPC1L1Q9UHC9 1359 aa19.54■□□□□ 0.72
SHTN1-204ENST00000392903 TNNT2P45379 298 aaPredicted RBP19.53■□□□□ 0.72
SHTN1-204ENST00000392903 SAFB2Q14151 953 aaKnown RBP eCLIP19.53■□□□□ 0.72
SHTN1-204ENST00000392903 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms