RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
GPC6-201ENST00000377047 AKAP17AQ02040 695 aaKnown RBP16.82■□□□□ 0.28
GPC6-201ENST00000377047 PDE4CQ08493 712 aa16.82■□□□□ 0.28
GPC6-201ENST00000377047 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
GPC6-201ENST00000377047 H3BQV1 296 aa16.82■□□□□ 0.28
GPC6-201ENST00000377047 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
GPC6-201ENST00000377047 HMOX1P09601 288 aa16.81■□□□□ 0.28
GPC6-201ENST00000377047 TMEM132EQ6IEE7 984 aa16.81■□□□□ 0.28
GPC6-201ENST00000377047 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
GPC6-201ENST00000377047 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
GPC6-201ENST00000377047 LRRFIP1Q32MZ4 808 aaKnown RBP16.8■□□□□ 0.28
GPC6-201ENST00000377047 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
GPC6-201ENST00000377047 FKBP5Q13451 457 aaPredicted RBP16.8■□□□□ 0.28
GPC6-201ENST00000377047 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
GPC6-201ENST00000377047 COG6Q9Y2V7 657 aa16.8■□□□□ 0.28
GPC6-201ENST00000377047 SYNE3Q6ZMZ3 975 aa16.79■□□□□ 0.28
GPC6-201ENST00000377047 FAM184AQ8NB25 1140 aa16.79■□□□□ 0.28
GPC6-201ENST00000377047 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
GPC6-201ENST00000377047 GRIN2BQ13224 1484 aa16.79■□□□□ 0.28
GPC6-201ENST00000377047 IFIT2P09913 472 aaKnown RBP16.79■□□□□ 0.28
GPC6-201ENST00000377047 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
GPC6-201ENST00000377047 MIA2Q96PC5 1412 aa16.79■□□□□ 0.28
GPC6-201ENST00000377047 APPP05067 770 aa16.79■□□□□ 0.28
GPC6-201ENST00000377047 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
GPC6-201ENST00000377047 PRM3Q9NNZ6 103 aa16.78■□□□□ 0.28
GPC6-201ENST00000377047 NLRP6P59044 892 aa16.77■□□□□ 0.28
GPC6-201ENST00000377047 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.28
GPC6-201ENST00000377047 ESCO1Q5FWF5 840 aa16.77■□□□□ 0.27
GPC6-201ENST00000377047 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.27
GPC6-201ENST00000377047 CRBNQ96SW2 442 aa16.77■□□□□ 0.27
GPC6-201ENST00000377047 CENPQQ7L2Z9 268 aaPredicted RBP16.76■□□□□ 0.27
GPC6-201ENST00000377047 ANKRD50Q9ULJ7 1429 aa16.76■□□□□ 0.27
GPC6-201ENST00000377047 USP35Q9P2H5 1018 aa16.76■□□□□ 0.27
GPC6-201ENST00000377047 TCEAL9Q9UHQ7 104 aa16.76■□□□□ 0.27
GPC6-201ENST00000377047 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
GPC6-201ENST00000377047 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
GPC6-201ENST00000377047 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
GPC6-201ENST00000377047 RBM33Q96EV2 1170 aaKnown RBP16.75■□□□□ 0.27
GPC6-201ENST00000377047 PROSER2Q86WR7 435 aaPredicted RBP16.75■□□□□ 0.27
GPC6-201ENST00000377047 API5Q9BZZ5 524 aaKnown RBP16.75■□□□□ 0.27
GPC6-201ENST00000377047 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
GPC6-201ENST00000377047 GPRASP1Q5JY77 1395 aa16.75■□□□□ 0.27
GPC6-201ENST00000377047 RIC3Q7Z5B4 369 aa16.75■□□□□ 0.27
GPC6-201ENST00000377047 PES1O00541 588 aaKnown RBP16.74■□□□□ 0.27
GPC6-201ENST00000377047 RUFY2Q8WXA3 655 aa16.74■□□□□ 0.27
GPC6-201ENST00000377047 DEKP35659 375 aaKnown RBP16.74■□□□□ 0.27
GPC6-201ENST00000377047 RRP1P56182 461 aaKnown RBP16.74■□□□□ 0.27
GPC6-201ENST00000377047 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
GPC6-201ENST00000377047 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
GPC6-201ENST00000377047 DHX16O60231 1041 aaKnown RBP16.74■□□□□ 0.27
GPC6-201ENST00000377047 DDX19BQ9UMR2 479 aa16.74■□□□□ 0.27
GPC6-201ENST00000377047 EXOC6Q8TAG9 804 aa16.73■□□□□ 0.27
GPC6-201ENST00000377047 TPD52L1Q16890 204 aaPredicted RBP16.73■□□□□ 0.27
GPC6-201ENST00000377047 MCTP1Q6DN14 999 aa16.73■□□□□ 0.27
GPC6-201ENST00000377047 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
GPC6-201ENST00000377047 ROCK1Q13464 1354 aa16.72■□□□□ 0.27
GPC6-201ENST00000377047 FOXD4L6Q3SYB3 417 aaPredicted RBP16.72■□□□□ 0.27
GPC6-201ENST00000377047 FOXD4L3Q6VB84 417 aaPredicted RBP16.72■□□□□ 0.27
GPC6-201ENST00000377047 GNAI1P63096 354 aa16.72■□□□□ 0.27
GPC6-201ENST00000377047 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
GPC6-201ENST00000377047 STAC3Q96MF2 364 aa16.72■□□□□ 0.27
GPC6-201ENST00000377047 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
GPC6-201ENST00000377047 ANO8Q9HCE9 1232 aaPredicted RBP16.71■□□□□ 0.27
GPC6-201ENST00000377047 NCOA2Q15596 1464 aa16.71■□□□□ 0.27
GPC6-201ENST00000377047 FYCO1Q9BQS8 1478 aa16.71■□□□□ 0.27
GPC6-201ENST00000377047 CEP89Q96ST8 783 aa16.71■□□□□ 0.27
GPC6-201ENST00000377047 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
GPC6-201ENST00000377047 GOLGA6L3A6NEY3 463 aa16.7■□□□□ 0.26
GPC6-201ENST00000377047 PHF14O94880 888 aa16.7■□□□□ 0.26
GPC6-201ENST00000377047 CPLX2Q6PUV4 134 aaKnown RBP16.7■□□□□ 0.26
GPC6-201ENST00000377047 STRN4Q9NRL3 753 aa16.7■□□□□ 0.26
GPC6-201ENST00000377047 TRIM29Q14134 588 aa16.7■□□□□ 0.26
GPC6-201ENST00000377047 LRRC9Q6ZRR7 1453 aa16.69■□□□□ 0.26
GPC6-201ENST00000377047 IPO9Q96P70 1041 aaKnown RBP16.69■□□□□ 0.26
GPC6-201ENST00000377047 CWC22Q9HCG8 908 aaKnown RBP16.69■□□□□ 0.26
GPC6-201ENST00000377047 ZKSCAN1P17029 563 aaPredicted RBP16.69■□□□□ 0.26
GPC6-201ENST00000377047 RRBP1Q9P2E9 1410 aaKnown RBP16.68■□□□□ 0.26
GPC6-201ENST00000377047 SAMD1Q6SPF0 538 aaPredicted RBP16.68■□□□□ 0.26
GPC6-201ENST00000377047 NESP48681 1621 aa16.68■□□□□ 0.26
GPC6-201ENST00000377047 CASKIN1Q8WXD9 1431 aa16.68■□□□□ 0.26
GPC6-201ENST00000377047 TRDNQ13061 729 aa16.68■□□□□ 0.26
GPC6-201ENST00000377047 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
GPC6-201ENST00000377047 NEUROD6Q96NK8 337 aa16.68■□□□□ 0.26
GPC6-201ENST00000377047 CFAP70Q5T0N1 1121 aa16.67■□□□□ 0.26
GPC6-201ENST00000377047 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
GPC6-201ENST00000377047 NFXL1Q6ZNB6 911 aa16.67■□□□□ 0.26
GPC6-201ENST00000377047 FAM177BA6PVY3 158 aa16.67■□□□□ 0.26
GPC6-201ENST00000377047 CPLX1O14810 134 aa16.66■□□□□ 0.26
GPC6-201ENST00000377047 NUTM2BA6NNL0 878 aaPredicted RBP16.66■□□□□ 0.26
GPC6-201ENST00000377047 NUTM2EB1AL46 878 aaPredicted RBP16.66■□□□□ 0.26
GPC6-201ENST00000377047 NUTM2AQ8IVF1 878 aaPredicted RBP16.66■□□□□ 0.26
GPC6-201ENST00000377047 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
GPC6-201ENST00000377047 FYB1O15117 783 aa16.66■□□□□ 0.26
GPC6-201ENST00000377047 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
GPC6-201ENST00000377047 KIF21BO75037 1637 aa16.66■□□□□ 0.26
GPC6-201ENST00000377047 TPM3P06753 285 aa16.66■□□□□ 0.26
GPC6-201ENST00000377047 THEMISQ8N1K5 641 aaPredicted RBP16.65■□□□□ 0.26
GPC6-201ENST00000377047 REC8O95072 547 aa16.65■□□□□ 0.26
GPC6-201ENST00000377047 ERICH2A1L162 156 aa16.65■□□□□ 0.26
GPC6-201ENST00000377047 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms