RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 IPO9Q96P70 1041 aaKnown RBP19.42■□□□□ 0.7
A1CF-202ENST00000373993 WASHC2AQ641Q2 1341 aa19.41■□□□□ 0.7
A1CF-202ENST00000373993 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
A1CF-202ENST00000373993 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
A1CF-202ENST00000373993 UBR1Q8IWV7 1749 aa19.39■□□□□ 0.69
A1CF-202ENST00000373993 ARHGAP31Q2M1Z3 1444 aa19.39■□□□□ 0.69
A1CF-202ENST00000373993 VWDEQ8N2E2 1590 aa19.39■□□□□ 0.69
A1CF-202ENST00000373993 ANP32AP39687 249 aaKnown RBP19.39■□□□□ 0.69
A1CF-202ENST00000373993 EFCAB6Q5THR3 1501 aa19.37■□□□□ 0.69
A1CF-202ENST00000373993 LMTK2Q8IWU2 1503 aa19.37■□□□□ 0.69
A1CF-202ENST00000373993 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
A1CF-202ENST00000373993 ZBED9Q6R2W3 1325 aa19.35■□□□□ 0.69
A1CF-202ENST00000373993 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
A1CF-202ENST00000373993 NPHP4O75161 1426 aaPredicted RBP19.34■□□□□ 0.69
A1CF-202ENST00000373993 IQGAP1P46940 1657 aa19.34■□□□□ 0.69
A1CF-202ENST00000373993 ZBTB47Q9UFB7 747 aaPredicted RBP19.33■□□□□ 0.68
A1CF-202ENST00000373993 SYNMO15061 1565 aa19.33■□□□□ 0.68
A1CF-202ENST00000373993 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
A1CF-202ENST00000373993 UNC13BO14795 1591 aa19.32■□□□□ 0.68
A1CF-202ENST00000373993 TET3O43151 1660 aa19.3■□□□□ 0.68
A1CF-202ENST00000373993 IDI1Q13907 227 aa19.3■□□□□ 0.68
A1CF-202ENST00000373993 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
A1CF-202ENST00000373993 MED14O60244 1454 aa19.29■□□□□ 0.68
A1CF-202ENST00000373993 SALL2Q9Y467 1007 aaPredicted RBP19.29■□□□□ 0.68
A1CF-202ENST00000373993 TONSLQ96HA7 1378 aa19.29■□□□□ 0.68
A1CF-202ENST00000373993 GCC2Q8IWJ2 1684 aa19.28■□□□□ 0.68
A1CF-202ENST00000373993 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
A1CF-202ENST00000373993 LTKP29376 864 aa19.28■□□□□ 0.68
A1CF-202ENST00000373993 TXNDC2Q86VQ3 553 aa19.28■□□□□ 0.68
A1CF-202ENST00000373993 RNF123Q5XPI4 1314 aa19.28■□□□□ 0.68
A1CF-202ENST00000373993 PAK3O75914 559 aaPredicted RBP19.27■□□□□ 0.68
A1CF-202ENST00000373993 NOS1P29475 1434 aa19.27■□□□□ 0.68
A1CF-202ENST00000373993 IQSEC2Q5JU85 1478 aa19.27■□□□□ 0.68
A1CF-202ENST00000373993 UBAP1LF5GYI3 381 aa19.26■□□□□ 0.67
A1CF-202ENST00000373993 E9PCH4 1651 aa19.25■□□□□ 0.67
A1CF-202ENST00000373993 SLIT1O75093 1534 aa19.25■□□□□ 0.67
A1CF-202ENST00000373993 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
A1CF-202ENST00000373993 EID1Q9Y6B2 187 aa19.25■□□□□ 0.67
A1CF-202ENST00000373993 ARHGAP23Q9P227 1491 aa19.25■□□□□ 0.67
A1CF-202ENST00000373993 NUP155O75694 1391 aa19.25■□□□□ 0.67
A1CF-202ENST00000373993 NBR1Q14596 966 aa19.24■□□□□ 0.67
A1CF-202ENST00000373993 IQGAP3Q86VI3 1631 aa19.24■□□□□ 0.67
A1CF-202ENST00000373993 RPRD2Q5VT52 1461 aaKnown RBP19.24■□□□□ 0.67
A1CF-202ENST00000373993 MYO5BQ9ULV0 1848 aa19.24■□□□□ 0.67
A1CF-202ENST00000373993 CCDC136Q96JN2 1154 aa19.24■□□□□ 0.67
A1CF-202ENST00000373993 SMG6Q86US8 1419 aaKnown RBP19.23■□□□□ 0.67
A1CF-202ENST00000373993 TMEM2Q9UHN6 1383 aa19.23■□□□□ 0.67
A1CF-202ENST00000373993 PPM1GO15355 546 aaPredicted RBP19.23■□□□□ 0.67
A1CF-202ENST00000373993 ADGRB3O60242 1522 aa19.23■□□□□ 0.67
A1CF-202ENST00000373993 CPS1P31327 1500 aa19.23■□□□□ 0.67
A1CF-202ENST00000373993 STRCP1A6NGW2 1772 aa19.23■□□□□ 0.67
A1CF-202ENST00000373993 KDM5AP29375 1690 aaKnown RBP19.22■□□□□ 0.67
A1CF-202ENST00000373993 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
A1CF-202ENST00000373993 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
A1CF-202ENST00000373993 B4GALNT3Q6L9W6 998 aa19.19■□□□□ 0.66
A1CF-202ENST00000373993 IRX6P78412 446 aaPredicted RBP19.18■□□□□ 0.66
A1CF-202ENST00000373993 PIP4K2BP78356 416 aa19.17■□□□□ 0.66
A1CF-202ENST00000373993 SLC26A8Q96RN1 970 aa19.15■□□□□ 0.66
A1CF-202ENST00000373993 TMEM131LA2VDJ0 1609 aa19.15■□□□□ 0.66
A1CF-202ENST00000373993 NAIPQ13075 1403 aa19.14■□□□□ 0.65
A1CF-202ENST00000373993 NUTM2DQ5VT03 806 aaPredicted RBP19.13■□□□□ 0.65
A1CF-202ENST00000373993 HFM1A2PYH4 1435 aa19.13■□□□□ 0.65
A1CF-202ENST00000373993 LRRC7Q96NW7 1537 aa19.13■□□□□ 0.65
A1CF-202ENST00000373993 TOM1O60784 492 aa19.12■□□□□ 0.65
A1CF-202ENST00000373993 SPHKAPQ2M3C7 1700 aa19.12■□□□□ 0.65
A1CF-202ENST00000373993 RIMS2Q9UQ26 1411 aa19.11■□□□□ 0.65
A1CF-202ENST00000373993 TCERG1O14776 1098 aaKnown RBP19.11■□□□□ 0.65
A1CF-202ENST00000373993 MS4A1P11836 297 aa19.11■□□□□ 0.65
A1CF-202ENST00000373993 IL27Q8NEV9 243 aa19.11■□□□□ 0.65
A1CF-202ENST00000373993 PRKRIP1Q9H875 184 aaPredicted RBP19.1■□□□□ 0.65
A1CF-202ENST00000373993 ZFYVE9O95405 1425 aa19.09■□□□□ 0.65
A1CF-202ENST00000373993 RBM33Q96EV2 1170 aaKnown RBP19.07■□□□□ 0.64
A1CF-202ENST00000373993 XIRP1Q702N8 1843 aaKnown RBP19.07■□□□□ 0.64
A1CF-202ENST00000373993 RSPH6AQ9H0K4 717 aa19.06■□□□□ 0.64
A1CF-202ENST00000373993 NUDCQ9Y266 331 aa19.06■□□□□ 0.64
A1CF-202ENST00000373993 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
A1CF-202ENST00000373993 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
A1CF-202ENST00000373993 ALKQ9UM73 1620 aa19.05■□□□□ 0.64
A1CF-202ENST00000373993 HDGFP51858 240 aaKnown RBP19.04■□□□□ 0.64
A1CF-202ENST00000373993 DISP3Q9P2K9 1392 aa19.04■□□□□ 0.64
A1CF-202ENST00000373993 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
A1CF-202ENST00000373993 HSPA1LP34931 641 aa19.03■□□□□ 0.64
A1CF-202ENST00000373993 ZNF326Q5BKZ1 582 aaKnown RBP19.03■□□□□ 0.64
A1CF-202ENST00000373993 DDRGK1Q96HY6 314 aa19.03■□□□□ 0.64
A1CF-202ENST00000373993 CLTCL1P53675 1640 aa19.02■□□□□ 0.64
A1CF-202ENST00000373993 KCNA6P17658 529 aa19.02■□□□□ 0.64
A1CF-202ENST00000373993 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
A1CF-202ENST00000373993 TMEM94Q12767 1356 aa19.01■□□□□ 0.63
A1CF-202ENST00000373993 CCDC7Q96M83 1385 aa19.01■□□□□ 0.63
A1CF-202ENST00000373993 NEFMP07197 916 aa19.01■□□□□ 0.63
A1CF-202ENST00000373993 HSPA5P11021 654 aaKnown RBP19.01■□□□□ 0.63
A1CF-202ENST00000373993 PROSER2Q86WR7 435 aaPredicted RBP19.01■□□□□ 0.63
A1CF-202ENST00000373993 SLC4A1APQ9BWU0 796 aaKnown RBP19.01■□□□□ 0.63
A1CF-202ENST00000373993 MRS2Q9HD23 443 aa19■□□□□ 0.63
A1CF-202ENST00000373993 TRPM2O94759 1503 aa18.99■□□□□ 0.63
A1CF-202ENST00000373993 NWD1Q149M9 1564 aa18.99■□□□□ 0.63
A1CF-202ENST00000373993 CHD2O14647 1828 aaKnown RBP18.98■□□□□ 0.63
A1CF-202ENST00000373993 KIF1BO60333 1816 aa18.98■□□□□ 0.63
A1CF-202ENST00000373993 GSE1Q14687 1217 aa18.98■□□□□ 0.63
A1CF-202ENST00000373993 FOXD1Q16676 465 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms