RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 CLSTN1O94985 981 aa12.27□□□□□ -0.44
SCAF11-202ENST00000369367 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.44
SCAF11-202ENST00000369367 ROCK1Q13464 1354 aa12.27□□□□□ -0.44
SCAF11-202ENST00000369367 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
SCAF11-202ENST00000369367 ESCO1Q5FWF5 840 aa12.26□□□□□ -0.45
SCAF11-202ENST00000369367 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
SCAF11-202ENST00000369367 CD109Q6YHK3 1445 aa12.26□□□□□ -0.45
SCAF11-202ENST00000369367 IQGAP2Q13576 1575 aa12.26□□□□□ -0.45
SCAF11-202ENST00000369367 TRIM6-TRIM34B2RNG4 842 aa12.26□□□□□ -0.45
SCAF11-202ENST00000369367 NBR1Q14596 966 aa12.25□□□□□ -0.45
SCAF11-202ENST00000369367 C9orf78Q9NZ63 289 aaPredicted RBP12.25□□□□□ -0.45
SCAF11-202ENST00000369367 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
SCAF11-202ENST00000369367 ABTB2Q8N961 1025 aa12.24□□□□□ -0.45
SCAF11-202ENST00000369367 CHAF1AQ13111 956 aaPredicted RBP12.24□□□□□ -0.45
SCAF11-202ENST00000369367 CCDC146Q8IYE0 955 aa12.24□□□□□ -0.45
SCAF11-202ENST00000369367 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
SCAF11-202ENST00000369367 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
SCAF11-202ENST00000369367 BICRAQ9NZM4 1560 aa12.23□□□□□ -0.45
SCAF11-202ENST00000369367 GNAI1P63096 354 aa12.23□□□□□ -0.45
SCAF11-202ENST00000369367 PLEKHO1Q53GL0 409 aaPredicted RBP12.23□□□□□ -0.45
SCAF11-202ENST00000369367 GAS2L2Q8NHY3 880 aa12.23□□□□□ -0.45
SCAF11-202ENST00000369367 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
SCAF11-202ENST00000369367 ZKSCAN2Q63HK3 967 aa12.22□□□□□ -0.45
SCAF11-202ENST00000369367 RAPGEF3O95398 923 aa12.22□□□□□ -0.45
SCAF11-202ENST00000369367 HSP90AB4PQ58FF6 505 aa12.21□□□□□ -0.45
SCAF11-202ENST00000369367 RBM33Q96EV2 1170 aaKnown RBP12.21□□□□□ -0.45
SCAF11-202ENST00000369367 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
SCAF11-202ENST00000369367 CTDP1Q9Y5B0 961 aaPredicted RBP12.21□□□□□ -0.45
SCAF11-202ENST00000369367 GRIN2AQ12879 1464 aa12.21□□□□□ -0.45
SCAF11-202ENST00000369367 TOMM22Q9NS69 142 aa12.21□□□□□ -0.45
SCAF11-202ENST00000369367 SUPT6HQ7KZ85 1726 aaKnown RBP12.21□□□□□ -0.46
SCAF11-202ENST00000369367 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
SCAF11-202ENST00000369367 B4GALNT3Q6L9W6 998 aa12.2□□□□□ -0.46
SCAF11-202ENST00000369367 EPRSP07814 1512 aaKnown RBP12.2□□□□□ -0.46
SCAF11-202ENST00000369367 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
SCAF11-202ENST00000369367 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
SCAF11-202ENST00000369367 RUFY2Q8WXA3 655 aa12.19□□□□□ -0.46
SCAF11-202ENST00000369367 AKNAQ7Z591 1439 aa12.19□□□□□ -0.46
SCAF11-202ENST00000369367 TCERG1O14776 1098 aaKnown RBP12.19□□□□□ -0.46
SCAF11-202ENST00000369367 KIAA2012Q0VF49 1180 aa12.19□□□□□ -0.46
SCAF11-202ENST00000369367 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
SCAF11-202ENST00000369367 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
SCAF11-202ENST00000369367 RIPK4P57078 832 aa12.19□□□□□ -0.46
SCAF11-202ENST00000369367 PLB1Q6P1J6 1458 aa12.18□□□□□ -0.46
SCAF11-202ENST00000369367 SYNE3Q6ZMZ3 975 aa12.18□□□□□ -0.46
SCAF11-202ENST00000369367 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
SCAF11-202ENST00000369367 MARCH6O60337 910 aa12.18□□□□□ -0.46
SCAF11-202ENST00000369367 GBP4Q96PP9 640 aa12.18□□□□□ -0.46
SCAF11-202ENST00000369367 PLCB2Q00722 1185 aa12.18□□□□□ -0.46
SCAF11-202ENST00000369367 AKAP17AQ02040 695 aaKnown RBP12.18□□□□□ -0.46
SCAF11-202ENST00000369367 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
SCAF11-202ENST00000369367 SYAP1Q96A49 352 aaPredicted RBP12.17□□□□□ -0.46
SCAF11-202ENST00000369367 TEX14Q8IWB6 1497 aa12.17□□□□□ -0.46
SCAF11-202ENST00000369367 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
SCAF11-202ENST00000369367 TPM4P67936 248 aa12.17□□□□□ -0.46
SCAF11-202ENST00000369367 CCDC141Q6ZP82 1450 aa12.17□□□□□ -0.46
SCAF11-202ENST00000369367 PRAM1Q96QH2 718 aa12.17□□□□□ -0.46
SCAF11-202ENST00000369367 DAPK1P53355 1430 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 G3BP1Q13283 466 aaKnown RBP eCLIP12.16□□□□□ -0.46
SCAF11-202ENST00000369367 DNTTIP2Q5QJE6 756 aaKnown RBP12.16□□□□□ -0.46
SCAF11-202ENST00000369367 TMEM132EQ6IEE7 984 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 CLUAP1Q96AJ1 413 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
SCAF11-202ENST00000369367 CABP2Q9NPB3 220 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 RRP7AQ9Y3A4 280 aaKnown RBP12.16□□□□□ -0.46
SCAF11-202ENST00000369367 DDX19BQ9UMR2 479 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 ATAD2Q6PL18 1390 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 AAMPQ13685 434 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 RASSF8Q8NHQ8 419 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
SCAF11-202ENST00000369367 KIF14Q15058 1648 aa12.15□□□□□ -0.46
SCAF11-202ENST00000369367 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
SCAF11-202ENST00000369367 FKBP5Q13451 457 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-202ENST00000369367 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
SCAF11-202ENST00000369367 CFAP70Q5T0N1 1121 aa12.15□□□□□ -0.46
SCAF11-202ENST00000369367 KLHL34Q8N239 644 aa12.15□□□□□ -0.46
SCAF11-202ENST00000369367 RTEL1-TNFRSF6BF6WH68 1400 aa12.15□□□□□ -0.46
SCAF11-202ENST00000369367 ST18O60284 1047 aa12.15□□□□□ -0.46
SCAF11-202ENST00000369367 KIF6Q6ZMV9 814 aa12.15□□□□□ -0.46
SCAF11-202ENST00000369367 PRKRIP1Q9H875 184 aaPredicted RBP12.15□□□□□ -0.46
SCAF11-202ENST00000369367 DENND4BO75064 1496 aaPredicted RBP12.15□□□□□ -0.47
SCAF11-202ENST00000369367 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.47
SCAF11-202ENST00000369367 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
SCAF11-202ENST00000369367 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
SCAF11-202ENST00000369367 IFIT2P09913 472 aaKnown RBP12.14□□□□□ -0.47
SCAF11-202ENST00000369367 TOM1L2Q6ZVM7 507 aa12.14□□□□□ -0.47
SCAF11-202ENST00000369367 KCNH5Q8NCM2 988 aa12.14□□□□□ -0.47
SCAF11-202ENST00000369367 PEG3Q9GZU2 1588 aa12.13□□□□□ -0.47
SCAF11-202ENST00000369367 GLIPR1L2Q4G1C9 344 aa12.13□□□□□ -0.47
SCAF11-202ENST00000369367 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
SCAF11-202ENST00000369367 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
SCAF11-202ENST00000369367 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCAF11-202ENST00000369367 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
SCAF11-202ENST00000369367 TCEAL9Q9UHQ7 104 aa12.13□□□□□ -0.47
SCAF11-202ENST00000369367 CWC22Q9HCG8 908 aaKnown RBP12.12□□□□□ -0.47
SCAF11-202ENST00000369367 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
SCAF11-202ENST00000369367 VPS53Q5VIR6 699 aa12.12□□□□□ -0.47
SCAF11-202ENST00000369367 APAF1O14727 1248 aa12.12□□□□□ -0.47
SCAF11-202ENST00000369367 TRDNQ13061 729 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms