RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 CANXP27824 592 aaKnown RBP23.82■■□□□ 1.4
PRDM1-202ENST00000369091 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
PRDM1-202ENST00000369091 PRAG1Q86YV5 1406 aa23.82■■□□□ 1.4
PRDM1-202ENST00000369091 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
PRDM1-202ENST00000369091 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
PRDM1-202ENST00000369091 CALD1Q05682 793 aaKnown RBP23.81■■□□□ 1.4
PRDM1-202ENST00000369091 KDM5DQ9BY66 1539 aa23.81■■□□□ 1.4
PRDM1-202ENST00000369091 TRPM1Q7Z4N2 1603 aa23.81■■□□□ 1.4
PRDM1-202ENST00000369091 APAF1O14727 1248 aa23.8■■□□□ 1.4
PRDM1-202ENST00000369091 ANKRD30AQ9BXX3 1397 aa23.8■■□□□ 1.4
PRDM1-202ENST00000369091 PDZRN3Q9UPQ7 1066 aa23.8■■□□□ 1.4
PRDM1-202ENST00000369091 ERBINQ96RT1 1412 aa23.79■■□□□ 1.4
PRDM1-202ENST00000369091 ADGRL2O95490 1459 aa23.79■■□□□ 1.4
PRDM1-202ENST00000369091 A0A0U1RQG5 324 aaPredicted RBP23.78■■□□□ 1.4
PRDM1-202ENST00000369091 DDX11L8A8MPP1 907 aa23.77■■□□□ 1.4
PRDM1-202ENST00000369091 MFAP1P55081 439 aaKnown RBP23.77■■□□□ 1.4
PRDM1-202ENST00000369091 PCDHB15Q9Y5E8 787 aa23.77■■□□□ 1.4
PRDM1-202ENST00000369091 PDE3AQ14432 1141 aa23.76■■□□□ 1.39
PRDM1-202ENST00000369091 ZNF692Q9BU19 519 aaPredicted RBP23.76■■□□□ 1.39
PRDM1-202ENST00000369091 TNNQ9UQP3 1299 aa23.76■■□□□ 1.39
PRDM1-202ENST00000369091 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
PRDM1-202ENST00000369091 RIPK4P57078 832 aa23.75■■□□□ 1.39
PRDM1-202ENST00000369091 CLASP1Q7Z460 1538 aa23.75■■□□□ 1.39
PRDM1-202ENST00000369091 C22orf23Q9BZE7 217 aa23.74■■□□□ 1.39
PRDM1-202ENST00000369091 IQGAP2Q13576 1575 aa23.74■■□□□ 1.39
PRDM1-202ENST00000369091 MAGI2Q86UL8 1455 aa23.74■■□□□ 1.39
PRDM1-202ENST00000369091 PRG4Q92954 1404 aaPredicted RBP23.74■■□□□ 1.39
PRDM1-202ENST00000369091 TMF1P82094 1093 aa23.73■■□□□ 1.39
PRDM1-202ENST00000369091 CROCC2H7BZ55 1655 aa23.73■■□□□ 1.39
PRDM1-202ENST00000369091 E9PSI1 815 aa23.72■■□□□ 1.39
PRDM1-202ENST00000369091 KNSTRNQ9Y448 316 aa23.72■■□□□ 1.39
PRDM1-202ENST00000369091 ISY1Q9ULR0 285 aaKnown RBP23.72■■□□□ 1.39
PRDM1-202ENST00000369091 NUP153P49790 1475 aaKnown RBP23.71■■□□□ 1.39
PRDM1-202ENST00000369091 ARID3AQ99856 593 aa23.7■■□□□ 1.38
PRDM1-202ENST00000369091 FAM13BQ9NYF5 915 aa23.69■■□□□ 1.38
PRDM1-202ENST00000369091 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
PRDM1-202ENST00000369091 RLBP1P12271 317 aa23.69■■□□□ 1.38
PRDM1-202ENST00000369091 AMER1Q5JTC6 1135 aaPredicted RBP23.69■■□□□ 1.38
PRDM1-202ENST00000369091 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
PRDM1-202ENST00000369091 HSCBQ8IWL3 235 aa23.68■■□□□ 1.38
PRDM1-202ENST00000369091 TNPO1Q92973 898 aaKnown RBP23.68■■□□□ 1.38
PRDM1-202ENST00000369091 PRDM15P57071 1507 aaPredicted RBP23.68■■□□□ 1.38
PRDM1-202ENST00000369091 GPATCH8Q9UKJ3 1502 aaKnown RBP23.68■■□□□ 1.38
PRDM1-202ENST00000369091 OFD1O75665 1012 aa23.67■■□□□ 1.38
PRDM1-202ENST00000369091 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
PRDM1-202ENST00000369091 ZSCAN30Q86W11 494 aa23.65■■□□□ 1.38
PRDM1-202ENST00000369091 BCL2L13Q9BXK5 485 aa23.64■■□□□ 1.38
PRDM1-202ENST00000369091 WDR7Q9Y4E6 1490 aa23.64■■□□□ 1.38
PRDM1-202ENST00000369091 DDIT3P35638 169 aa23.63■■□□□ 1.37
PRDM1-202ENST00000369091 R3HCC1Q9Y3T6 440 aaKnown RBP23.63■■□□□ 1.37
PRDM1-202ENST00000369091 A2MP01023 1474 aa23.63■■□□□ 1.37
PRDM1-202ENST00000369091 CCDC173Q0VFZ6 552 aa23.63■■□□□ 1.37
PRDM1-202ENST00000369091 NINLQ9Y2I6 1382 aa23.62■■□□□ 1.37
PRDM1-202ENST00000369091 NASPP49321 788 aaPredicted RBP23.62■■□□□ 1.37
PRDM1-202ENST00000369091 CCDC144AA2RUR9 1427 aa23.61■■□□□ 1.37
PRDM1-202ENST00000369091 C9orf84Q5VXU9 1444 aa23.61■■□□□ 1.37
PRDM1-202ENST00000369091 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.61■■□□□ 1.37
PRDM1-202ENST00000369091 FOXD4L1Q9NU39 408 aa23.61■■□□□ 1.37
PRDM1-202ENST00000369091 ZMYM3Q14202 1370 aa23.6■■□□□ 1.37
PRDM1-202ENST00000369091 ITSN2Q9NZM3 1697 aa23.6■■□□□ 1.37
PRDM1-202ENST00000369091 TROQ12816 1431 aaPredicted RBP23.6■■□□□ 1.37
PRDM1-202ENST00000369091 MSNP26038 577 aaKnown RBP23.6■■□□□ 1.37
PRDM1-202ENST00000369091 PPP1R9BQ96SB3 815 aa23.6■■□□□ 1.37
PRDM1-202ENST00000369091 NCOA3Q9Y6Q9 1424 aa23.59■■□□□ 1.37
PRDM1-202ENST00000369091 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
PRDM1-202ENST00000369091 AAMPQ13685 434 aa23.59■■□□□ 1.37
PRDM1-202ENST00000369091 PIK3C2GO75747 1445 aa23.58■■□□□ 1.37
PRDM1-202ENST00000369091 RWDD1Q9H446 243 aaPredicted RBP23.58■■□□□ 1.36
PRDM1-202ENST00000369091 PTPRGP23470 1445 aa23.57■■□□□ 1.36
PRDM1-202ENST00000369091 FAM135AQ9P2D6 1515 aa23.57■■□□□ 1.36
PRDM1-202ENST00000369091 RARSP54136 660 aaKnown RBP23.57■■□□□ 1.36
PRDM1-202ENST00000369091 GBP4Q96PP9 640 aa23.57■■□□□ 1.36
PRDM1-202ENST00000369091 PRDM10Q9NQV6 1147 aa23.57■■□□□ 1.36
PRDM1-202ENST00000369091 NEUROD2Q15784 382 aa23.56■■□□□ 1.36
PRDM1-202ENST00000369091 RAPGEF6Q8TEU7 1601 aa23.55■■□□□ 1.36
PRDM1-202ENST00000369091 RAB3GAP1Q15042 981 aa23.55■■□□□ 1.36
PRDM1-202ENST00000369091 WWC1Q8IX03 1113 aa23.55■■□□□ 1.36
PRDM1-202ENST00000369091 ABCC10Q5T3U5 1492 aa23.55■■□□□ 1.36
PRDM1-202ENST00000369091 LAMC1P11047 1609 aa23.54■■□□□ 1.36
PRDM1-202ENST00000369091 ZHX1Q9UKY1 873 aaPredicted RBP23.54■■□□□ 1.36
PRDM1-202ENST00000369091 UQCRHLA0A096LP55 91 aa23.53■■□□□ 1.36
PRDM1-202ENST00000369091 PLXNC1O60486 1568 aa23.53■■□□□ 1.36
PRDM1-202ENST00000369091 UQCRHP07919 91 aa23.53■■□□□ 1.36
PRDM1-202ENST00000369091 HSP90AB1P08238 724 aaKnown RBP23.53■■□□□ 1.36
PRDM1-202ENST00000369091 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
PRDM1-202ENST00000369091 ADCY10Q96PN6 1610 aa23.53■■□□□ 1.36
PRDM1-202ENST00000369091 RRP7AQ9Y3A4 280 aaKnown RBP23.53■■□□□ 1.36
PRDM1-202ENST00000369091 SKOR2Q2VWA4 1001 aaPredicted RBP23.52■■□□□ 1.36
PRDM1-202ENST00000369091 ASXL1Q8IXJ9 1541 aa23.52■■□□□ 1.36
PRDM1-202ENST00000369091 SMC5Q8IY18 1101 aa23.51■■□□□ 1.35
PRDM1-202ENST00000369091 MAP7D2Q96T17 732 aa23.5■■□□□ 1.35
PRDM1-202ENST00000369091 CDC42BPAQ5VT25 1732 aa23.5■■□□□ 1.35
PRDM1-202ENST00000369091 TERF1P54274 439 aa23.5■■□□□ 1.35
PRDM1-202ENST00000369091 ANP32BQ92688 251 aaKnown RBP23.5■■□□□ 1.35
PRDM1-202ENST00000369091 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
PRDM1-202ENST00000369091 SSFA2P28290 1259 aa23.48■■□□□ 1.35
PRDM1-202ENST00000369091 DISP1Q96F81 1524 aa23.48■■□□□ 1.35
PRDM1-202ENST00000369091 KIAA0556O60303 1618 aa23.48■■□□□ 1.35
PRDM1-202ENST00000369091 TSPY4P0CV99 314 aa23.48■■□□□ 1.35
PRDM1-202ENST00000369091 TSPY10P0CW01 314 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms