RNA–Protein interactions for RNA: ENST00000368926.5

C1orf56-201, Transcript of chromosome 1 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf56, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-201ENST00000368926 CLTCL1P53675 1640 aa23.66■■□□□ 1.38
C1orf56-201ENST00000368926 POLR1AO95602 1720 aaPredicted RBP23.65■■□□□ 1.38
C1orf56-201ENST00000368926 MYO3AQ8NEV4 1616 aa23.65■■□□□ 1.38
C1orf56-201ENST00000368926 CCDC7Q96M83 1385 aa23.65■■□□□ 1.38
C1orf56-201ENST00000368926 ERICH6Q7L0X2 663 aa23.64■■□□□ 1.38
C1orf56-201ENST00000368926 IRX6P78412 446 aaPredicted RBP23.64■■□□□ 1.37
C1orf56-201ENST00000368926 ZBED9Q6R2W3 1325 aa23.63■■□□□ 1.37
C1orf56-201ENST00000368926 IDI1Q13907 227 aa23.63■■□□□ 1.37
C1orf56-201ENST00000368926 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
C1orf56-201ENST00000368926 SLC52A1Q9NWF4 448 aa23.63■■□□□ 1.37
C1orf56-201ENST00000368926 NLRP1Q9C000 1473 aa23.63■■□□□ 1.37
C1orf56-201ENST00000368926 SETD1BQ9UPS6 1966 aaKnown RBP23.62■■□□□ 1.37
C1orf56-201ENST00000368926 CCDC144AA2RUR9 1427 aa23.61■■□□□ 1.37
C1orf56-201ENST00000368926 L3MBTL2Q969R5 705 aa23.59■■□□□ 1.37
C1orf56-201ENST00000368926 ZNF142P52746 1687 aaPredicted RBP23.58■■□□□ 1.36
C1orf56-201ENST00000368926 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
C1orf56-201ENST00000368926 A2ML1A8K2U0 1454 aa23.57■■□□□ 1.36
C1orf56-201ENST00000368926 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
C1orf56-201ENST00000368926 MRS2Q9HD23 443 aa23.55■■□□□ 1.36
C1orf56-201ENST00000368926 TMEM131LA2VDJ0 1609 aa23.55■■□□□ 1.36
C1orf56-201ENST00000368926 ADGRB3O60242 1522 aa23.55■■□□□ 1.36
C1orf56-201ENST00000368926 UBR1Q8IWV7 1749 aa23.55■■□□□ 1.36
C1orf56-201ENST00000368926 KIF1BO60333 1816 aa23.54■■□□□ 1.36
C1orf56-201ENST00000368926 KDM5AP29375 1690 aaKnown RBP23.54■■□□□ 1.36
C1orf56-201ENST00000368926 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
C1orf56-201ENST00000368926 MYO5BQ9ULV0 1848 aa23.52■■□□□ 1.36
C1orf56-201ENST00000368926 SPATA31E1Q6ZUB1 1445 aa23.51■■□□□ 1.35
C1orf56-201ENST00000368926 C11orf95C9JLR9 678 aaPredicted RBP23.51■■□□□ 1.35
C1orf56-201ENST00000368926 FAM9BQ8IZU0 186 aa23.51■■□□□ 1.35
C1orf56-201ENST00000368926 LMTK3Q96Q04 1460 aa23.5■■□□□ 1.35
C1orf56-201ENST00000368926 CHGAP10645 457 aaKnown RBP23.5■■□□□ 1.35
C1orf56-201ENST00000368926 NEURL4Q96JN8 1562 aa23.49■■□□□ 1.35
C1orf56-201ENST00000368926 STAG3Q9UJ98 1225 aa23.48■■□□□ 1.35
C1orf56-201ENST00000368926 KIF7Q2M1P5 1343 aa23.46■■□□□ 1.35
C1orf56-201ENST00000368926 NBPF8Q3BBV2 869 aa23.44■■□□□ 1.34
C1orf56-201ENST00000368926 THEMISQ8N1K5 641 aaPredicted RBP23.44■■□□□ 1.34
C1orf56-201ENST00000368926 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
C1orf56-201ENST00000368926 RGL3Q3MIN7 710 aa23.42■■□□□ 1.34
C1orf56-201ENST00000368926 ARHGAP23Q9P227 1491 aa23.42■■□□□ 1.34
C1orf56-201ENST00000368926 B4GALNT3Q6L9W6 998 aa23.42■■□□□ 1.34
C1orf56-201ENST00000368926 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
C1orf56-201ENST00000368926 SLIT1O75093 1534 aa23.42■■□□□ 1.34
C1orf56-201ENST00000368926 TMEM2Q9UHN6 1383 aa23.41■■□□□ 1.34
C1orf56-201ENST00000368926 ZNF326Q5BKZ1 582 aaKnown RBP23.4■■□□□ 1.34
C1orf56-201ENST00000368926 NEXMIFQ5QGS0 1516 aa23.4■■□□□ 1.34
C1orf56-201ENST00000368926 ZFYVE9O95405 1425 aa23.4■■□□□ 1.34
C1orf56-201ENST00000368926 HSPA2P54652 639 aa23.39■■□□□ 1.34
C1orf56-201ENST00000368926 RIMS2Q9UQ26 1411 aa23.39■■□□□ 1.33
C1orf56-201ENST00000368926 IFT172Q9UG01 1749 aa23.38■■□□□ 1.33
C1orf56-201ENST00000368926 PPLO60437 1756 aa23.38■■□□□ 1.33
C1orf56-201ENST00000368926 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
C1orf56-201ENST00000368926 LTKP29376 864 aa23.34■■□□□ 1.33
C1orf56-201ENST00000368926 NUTM2DQ5VT03 806 aaPredicted RBP23.33■■□□□ 1.33
C1orf56-201ENST00000368926 RNF123Q5XPI4 1314 aa23.33■■□□□ 1.32
C1orf56-201ENST00000368926 NUDCQ9Y266 331 aa23.32■■□□□ 1.32
C1orf56-201ENST00000368926 SCAF11Q99590 1463 aaKnown RBP23.32■■□□□ 1.32
C1orf56-201ENST00000368926 TXNDC2Q86VQ3 553 aa23.31■■□□□ 1.32
C1orf56-201ENST00000368926 DCAF11Q8TEB1 546 aa23.31■■□□□ 1.32
C1orf56-201ENST00000368926 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.31■■□□□ 1.32
C1orf56-201ENST00000368926 MYOM2P54296 1465 aa23.3■■□□□ 1.32
C1orf56-201ENST00000368926 ANKLE2Q86XL3 938 aa23.3■■□□□ 1.32
C1orf56-201ENST00000368926 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
C1orf56-201ENST00000368926 NCKAP5LQ9HCH0 1330 aa23.29■■□□□ 1.32
C1orf56-201ENST00000368926 HDGFP51858 240 aaKnown RBP23.29■■□□□ 1.32
C1orf56-201ENST00000368926 NOP58Q9Y2X3 529 aaKnown RBP23.29■■□□□ 1.32
C1orf56-201ENST00000368926 STRCQ7RTU9 1775 aa23.29■■□□□ 1.32
C1orf56-201ENST00000368926 VGFO15240 615 aaPredicted RBP23.28■■□□□ 1.32
C1orf56-201ENST00000368926 KDM2AQ9Y2K7 1162 aa23.28■■□□□ 1.32
C1orf56-201ENST00000368926 ADGRF5Q8IZF2 1346 aa23.27■■□□□ 1.32
C1orf56-201ENST00000368926 NRXN1Q9ULB1 1477 aa23.27■■□□□ 1.32
C1orf56-201ENST00000368926 ROCK2O75116 1388 aaKnown RBP23.26■■□□□ 1.31
C1orf56-201ENST00000368926 USP47Q96K76 1375 aa23.26■■□□□ 1.31
C1orf56-201ENST00000368926 MED14O60244 1454 aa23.25■■□□□ 1.31
C1orf56-201ENST00000368926 PLEKHG1Q9ULL1 1385 aa23.25■■□□□ 1.31
C1orf56-201ENST00000368926 STAC3Q96MF2 364 aa23.24■■□□□ 1.31
C1orf56-201ENST00000368926 NRXN3Q9Y4C0 1643 aa23.23■■□□□ 1.31
C1orf56-201ENST00000368926 PIK3C2GO75747 1445 aa23.22■■□□□ 1.31
C1orf56-201ENST00000368926 SETBP1Q9Y6X0 1596 aa23.22■■□□□ 1.31
C1orf56-201ENST00000368926 NPHP4O75161 1426 aaPredicted RBP23.22■■□□□ 1.31
C1orf56-201ENST00000368926 CCDC136Q96JN2 1154 aa23.21■■□□□ 1.31
C1orf56-201ENST00000368926 SENP3Q9H4L4 574 aaPredicted RBP23.21■■□□□ 1.31
C1orf56-201ENST00000368926 IQGAP1P46940 1657 aa23.21■■□□□ 1.31
C1orf56-201ENST00000368926 PRAG1Q86YV5 1406 aa23.21■■□□□ 1.31
C1orf56-201ENST00000368926 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
C1orf56-201ENST00000368926 ADAMTS13Q76LX8 1427 aa23.18■■□□□ 1.3
C1orf56-201ENST00000368926 DEKP35659 375 aaKnown RBP23.18■■□□□ 1.3
C1orf56-201ENST00000368926 ANP32AP39687 249 aaKnown RBP23.17■■□□□ 1.3
C1orf56-201ENST00000368926 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
C1orf56-201ENST00000368926 ALKQ9UM73 1620 aa23.16■■□□□ 1.3
C1orf56-201ENST00000368926 SETD1AO15047 1707 aaKnown RBP23.15■■□□□ 1.3
C1orf56-201ENST00000368926 PNISRQ8TF01 805 aaKnown RBP23.15■■□□□ 1.3
C1orf56-201ENST00000368926 SLC26A8Q96RN1 970 aa23.14■■□□□ 1.29
C1orf56-201ENST00000368926 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
C1orf56-201ENST00000368926 C14orf93Q9H972 538 aaKnown RBP23.13■■□□□ 1.29
C1orf56-201ENST00000368926 LAMC1P11047 1609 aa23.12■■□□□ 1.29
C1orf56-201ENST00000368926 CFAP70Q5T0N1 1121 aa23.12■■□□□ 1.29
C1orf56-201ENST00000368926 IPO9Q96P70 1041 aaKnown RBP23.12■■□□□ 1.29
C1orf56-201ENST00000368926 TMC1Q8TDI8 760 aa23.12■■□□□ 1.29
C1orf56-201ENST00000368926 TRPM1Q7Z4N2 1603 aa23.11■■□□□ 1.29
C1orf56-201ENST00000368926 KIAA1210Q9ULL0 1709 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms