RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 HECW2Q9P2P5 1572 aa22.88■■□□□ 1.25
CHTOP-203ENST00000368690 SENP3-EIF4A1A0A087X0R7 540 aa22.88■■□□□ 1.25
CHTOP-203ENST00000368690 KIF3BO15066 747 aa22.87■■□□□ 1.25
CHTOP-203ENST00000368690 LAMC1P11047 1609 aa22.86■■□□□ 1.25
CHTOP-203ENST00000368690 PPRC1Q5VV67 1664 aaKnown RBP22.86■■□□□ 1.25
CHTOP-203ENST00000368690 TRPM1Q7Z4N2 1603 aa22.85■■□□□ 1.25
CHTOP-203ENST00000368690 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
CHTOP-203ENST00000368690 KDM2BQ8NHM5 1336 aa22.85■■□□□ 1.25
CHTOP-203ENST00000368690 PER1O15534 1290 aaPredicted RBP22.84■■□□□ 1.25
CHTOP-203ENST00000368690 NFKBIBQ15653 356 aa22.84■■□□□ 1.25
CHTOP-203ENST00000368690 CRBNQ96SW2 442 aa22.83■■□□□ 1.25
CHTOP-203ENST00000368690 RTN4Q9NQC3 1192 aaKnown RBP22.83■■□□□ 1.25
CHTOP-203ENST00000368690 RICTORQ6R327 1708 aa22.83■■□□□ 1.25
CHTOP-203ENST00000368690 CDCA7LQ96GN5 454 aa22.82■■□□□ 1.24
CHTOP-203ENST00000368690 A2MP01023 1474 aa22.81■■□□□ 1.24
CHTOP-203ENST00000368690 CENPQQ7L2Z9 268 aaPredicted RBP22.81■■□□□ 1.24
CHTOP-203ENST00000368690 IQGAP3Q86VI3 1631 aa22.8■■□□□ 1.24
CHTOP-203ENST00000368690 GPRASP1Q5JY77 1395 aa22.8■■□□□ 1.24
CHTOP-203ENST00000368690 COL17A1Q9UMD9 1497 aaPredicted RBP22.8■■□□□ 1.24
CHTOP-203ENST00000368690 ABCA6Q8N139 1617 aa22.79■■□□□ 1.24
CHTOP-203ENST00000368690 MAGI2Q86UL8 1455 aa22.79■■□□□ 1.24
CHTOP-203ENST00000368690 PRAG1Q86YV5 1406 aa22.78■■□□□ 1.24
CHTOP-203ENST00000368690 TRHP20396 242 aaPredicted RBP22.77■■□□□ 1.24
CHTOP-203ENST00000368690 KANK1Q14678 1352 aa22.77■■□□□ 1.24
CHTOP-203ENST00000368690 DNAJC5Q9H3Z4 198 aa22.77■■□□□ 1.24
CHTOP-203ENST00000368690 DAXXQ9UER7 740 aaPredicted RBP22.77■■□□□ 1.24
CHTOP-203ENST00000368690 EIF2AK4Q9P2K8 1649 aaKnown RBP22.76■■□□□ 1.23
CHTOP-203ENST00000368690 FAM161AQ3B820 660 aa22.76■■□□□ 1.23
CHTOP-203ENST00000368690 DCAF11Q8TEB1 546 aa22.76■■□□□ 1.23
CHTOP-203ENST00000368690 FRMPD1Q5SYB0 1578 aa22.76■■□□□ 1.23
CHTOP-203ENST00000368690 PLIN1O60240 522 aa22.76■■□□□ 1.23
CHTOP-203ENST00000368690 YEATS2Q9ULM3 1422 aa22.75■■□□□ 1.23
CHTOP-203ENST00000368690 BRPF3Q9ULD4 1205 aa22.74■■□□□ 1.23
CHTOP-203ENST00000368690 GGT6Q6P531 493 aa22.74■■□□□ 1.23
CHTOP-203ENST00000368690 PRDM15P57071 1507 aaPredicted RBP22.74■■□□□ 1.23
CHTOP-203ENST00000368690 DEPDC5O75140 1603 aa22.74■■□□□ 1.23
CHTOP-203ENST00000368690 KDM2AQ9Y2K7 1162 aa22.73■■□□□ 1.23
CHTOP-203ENST00000368690 DIP2CQ9Y2E4 1556 aa22.73■■□□□ 1.23
CHTOP-203ENST00000368690 FRAT1Q92837 279 aaPredicted RBP22.72■■□□□ 1.23
CHTOP-203ENST00000368690 C8orf34Q49A92 452 aa22.7■■□□□ 1.23
CHTOP-203ENST00000368690 CCDC144AA2RUR9 1427 aa22.68■■□□□ 1.22
CHTOP-203ENST00000368690 MROH1Q8NDA8 1641 aa22.67■■□□□ 1.22
CHTOP-203ENST00000368690 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.67■■□□□ 1.22
CHTOP-203ENST00000368690 VIRMAQ69YN4 1812 aaKnown RBP22.66■■□□□ 1.22
CHTOP-203ENST00000368690 UBE2Q2Q8WVN8 375 aa22.65■■□□□ 1.22
CHTOP-203ENST00000368690 TESK2Q96S53 571 aa22.65■■□□□ 1.22
CHTOP-203ENST00000368690 SKAP1Q86WV1 359 aa22.65■■□□□ 1.22
CHTOP-203ENST00000368690 EIF3AQ14152 1382 aaKnown RBP22.64■■□□□ 1.21
CHTOP-203ENST00000368690 C20orf194Q5TEA3 1177 aa22.64■■□□□ 1.21
CHTOP-203ENST00000368690 RNF17Q9BXT8 1623 aaKnown RBP22.63■■□□□ 1.21
CHTOP-203ENST00000368690 FAM43AQ8N2R8 423 aa22.63■■□□□ 1.21
CHTOP-203ENST00000368690 TET3O43151 1660 aa22.63■■□□□ 1.21
CHTOP-203ENST00000368690 DUSP27Q5VZP5 1158 aa22.63■■□□□ 1.21
CHTOP-203ENST00000368690 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.63■■□□□ 1.21
CHTOP-203ENST00000368690 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
CHTOP-203ENST00000368690 ZNF521Q96K83 1311 aa22.63■■□□□ 1.21
CHTOP-203ENST00000368690 DISP3Q9P2K9 1392 aa22.62■■□□□ 1.21
CHTOP-203ENST00000368690 PLA2R1Q13018 1463 aa22.62■■□□□ 1.21
CHTOP-203ENST00000368690 SLC4A3P48751 1232 aa22.61■■□□□ 1.21
CHTOP-203ENST00000368690 CC2D1BQ5T0F9 858 aaKnown RBP22.61■■□□□ 1.21
CHTOP-203ENST00000368690 PANK3Q9H999 370 aa22.61■■□□□ 1.21
CHTOP-203ENST00000368690 CEP152O94986 1710 aa22.61■■□□□ 1.21
CHTOP-203ENST00000368690 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
CHTOP-203ENST00000368690 ATP10AO60312 1499 aa22.59■■□□□ 1.21
CHTOP-203ENST00000368690 TMF1P82094 1093 aa22.59■■□□□ 1.21
CHTOP-203ENST00000368690 RSPH6AQ9H0K4 717 aa22.59■■□□□ 1.21
CHTOP-203ENST00000368690 ADAMTS8Q9UP79 889 aa22.57■■□□□ 1.2
CHTOP-203ENST00000368690 PLEKHH1Q9ULM0 1364 aa22.57■■□□□ 1.2
CHTOP-203ENST00000368690 FRAT2O75474 233 aaPredicted RBP22.56■■□□□ 1.2
CHTOP-203ENST00000368690 NBPF1Q3BBV0 1214 aa22.56■■□□□ 1.2
CHTOP-203ENST00000368690 EFCAB6Q5THR3 1501 aa22.56■■□□□ 1.2
CHTOP-203ENST00000368690 GOLGA2Q08379 1002 aa22.56■■□□□ 1.2
CHTOP-203ENST00000368690 SPHKAPQ2M3C7 1700 aa22.55■■□□□ 1.2
CHTOP-203ENST00000368690 TRMT2AQ8IZ69 625 aaKnown RBP22.53■■□□□ 1.2
CHTOP-203ENST00000368690 MLECQ14165 292 aa22.52■■□□□ 1.2
CHTOP-203ENST00000368690 ABCC3O15438 1527 aa22.52■■□□□ 1.2
CHTOP-203ENST00000368690 LMTK2Q8IWU2 1503 aa22.52■■□□□ 1.2
CHTOP-203ENST00000368690 PIK3C2GO75747 1445 aa22.52■■□□□ 1.2
CHTOP-203ENST00000368690 WDR43Q15061 677 aaKnown RBP eCLIP22.52■■□□□ 1.27e-6■■■■■ 27.3
CHTOP-203ENST00000368690 TRPM2O94759 1503 aa22.52■■□□□ 1.19
CHTOP-203ENST00000368690 CFAP65Q6ZU64 1925 aaKnown RBP22.51■■□□□ 1.19
CHTOP-203ENST00000368690 ARHGEF40Q8TER5 1519 aa22.51■■□□□ 1.19
CHTOP-203ENST00000368690 SLFN5Q08AF3 891 aa22.51■■□□□ 1.19
CHTOP-203ENST00000368690 PTPRTO14522 1441 aa22.5■■□□□ 1.19
CHTOP-203ENST00000368690 PPP2R1AP30153 589 aa22.49■■□□□ 1.19
CHTOP-203ENST00000368690 NPC1L1Q9UHC9 1359 aa22.48■■□□□ 1.19
CHTOP-203ENST00000368690 NPATQ14207 1427 aa22.48■■□□□ 1.19
CHTOP-203ENST00000368690 SYNMO15061 1565 aa22.48■■□□□ 1.19
CHTOP-203ENST00000368690 NKTRP30414 1462 aaKnown RBP22.47■■□□□ 1.19
CHTOP-203ENST00000368690 CAMSAP1Q5T5Y3 1602 aa22.47■■□□□ 1.19
CHTOP-203ENST00000368690 NINLQ9Y2I6 1382 aa22.47■■□□□ 1.19
CHTOP-203ENST00000368690 CLTCL1P53675 1640 aa22.47■■□□□ 1.19
CHTOP-203ENST00000368690 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
CHTOP-203ENST00000368690 UGGT1Q9NYU2 1555 aa22.46■■□□□ 1.19
CHTOP-203ENST00000368690 REREQ9P2R6 1566 aa22.46■■□□□ 1.19
CHTOP-203ENST00000368690 USP19O94966 1318 aa22.46■■□□□ 1.19
CHTOP-203ENST00000368690 MAPK8IP3Q9UPT6 1336 aa22.45■■□□□ 1.18
CHTOP-203ENST00000368690 RGS3P49796 1198 aa22.45■■□□□ 1.18
CHTOP-203ENST00000368690 BECN1Q14457 450 aa22.45■■□□□ 1.18
CHTOP-203ENST00000368690 ZMYM3Q14202 1370 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms