RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 TMC2Q8TDI7 906 aa5.84□□□□□ -1.48
ECHDC1-205ENST00000368295 LARP6Q9BRS8 491 aaKnown RBP5.84□□□□□ -1.48
ECHDC1-205ENST00000368295 STK17AQ9UEE5 414 aa5.84□□□□□ -1.48
ECHDC1-205ENST00000368295 YEATS2Q9ULM3 1422 aa5.83□□□□□ -1.48
ECHDC1-205ENST00000368295 PBRM1Q86U86 1689 aa5.83□□□□□ -1.48
ECHDC1-205ENST00000368295 FGD5Q6ZNL6 1462 aa5.83□□□□□ -1.48
ECHDC1-205ENST00000368295 PRDM2Q13029 1718 aa5.83□□□□□ -1.48
ECHDC1-205ENST00000368295 DDX27Q96GQ7 796 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-205ENST00000368295 PSDA5PKW4 1024 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-205ENST00000368295 KHSRPQ92945 711 aaKnown RBP eCLIP5.82□□□□□ -1.482e-12■■■□□ 17
ECHDC1-205ENST00000368295 PTPRTO14522 1441 aa5.82□□□□□ -1.48
ECHDC1-205ENST00000368295 GPHNQ9NQX3 736 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-205ENST00000368295 TEX14Q8IWB6 1497 aa5.81□□□□□ -1.48
ECHDC1-205ENST00000368295 MAP3K4Q9Y6R4 1608 aa5.81□□□□□ -1.48
ECHDC1-205ENST00000368295 NBR1Q14596 966 aa5.8□□□□□ -1.48
ECHDC1-205ENST00000368295 E2F4Q16254 413 aa5.8□□□□□ -1.48
ECHDC1-205ENST00000368295 PPP1R15BQ5SWA1 713 aa5.8□□□□□ -1.48
ECHDC1-205ENST00000368295 UPF1Q92900 1129 aaKnown RBP eCLIP5.8□□□□□ -1.481e-6■□□□□ 8
ECHDC1-205ENST00000368295 BCORL1Q5H9F3 1711 aa5.8□□□□□ -1.48
ECHDC1-205ENST00000368295 EPRSP07814 1512 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-205ENST00000368295 ZNF335Q9H4Z2 1342 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-205ENST00000368295 TMEM132AQ24JP5 1023 aa5.8□□□□□ -1.48
ECHDC1-205ENST00000368295 PTPN5P54829 565 aa5.79□□□□□ -1.48
ECHDC1-205ENST00000368295 IQSEC2Q5JU85 1478 aa5.79□□□□□ -1.48
ECHDC1-205ENST00000368295 KCNV2Q8TDN2 545 aa5.78□□□□□ -1.48
ECHDC1-205ENST00000368295 LHX6Q9UPM6 363 aa5.78□□□□□ -1.48
ECHDC1-205ENST00000368295 PLB1Q6P1J6 1458 aa5.78□□□□□ -1.48
ECHDC1-205ENST00000368295 C2orf72A6NCS6 295 aa5.78□□□□□ -1.48
ECHDC1-205ENST00000368295 KIF3CO14782 793 aa5.78□□□□□ -1.48
ECHDC1-205ENST00000368295 ZNF787Q6DD87 383 aa5.78□□□□□ -1.48
ECHDC1-205ENST00000368295 ABCC2Q92887 1545 aa5.78□□□□□ -1.48
ECHDC1-205ENST00000368295 WDR97A6NE52 1622 aa5.77□□□□□ -1.49
ECHDC1-205ENST00000368295 LCE2BO14633 110 aa5.77□□□□□ -1.49
ECHDC1-205ENST00000368295 CEBPAP49715 358 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-205ENST00000368295 FOXK1P85037 733 aa5.77□□□□□ -1.49
ECHDC1-205ENST00000368295 DSG2Q14126 1118 aa5.77□□□□□ -1.49
ECHDC1-205ENST00000368295 KRTAP1-3Q8IUG1 177 aa5.77□□□□□ -1.49
ECHDC1-205ENST00000368295 NUDT7P0C024 238 aa5.76□□□□□ -1.49
ECHDC1-205ENST00000368295 CAMK2BQ13554 666 aa5.76□□□□□ -1.49
ECHDC1-205ENST00000368295 C14orf37Q86TY3 774 aa5.76□□□□□ -1.49
ECHDC1-205ENST00000368295 ARHGEF1Q92888 912 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-205ENST00000368295 ADAMTS12P58397 1594 aa5.76□□□□□ -1.49
ECHDC1-205ENST00000368295 MLECQ14165 292 aa5.76□□□□□ -1.49
ECHDC1-205ENST00000368295 NPM2Q86SE8 214 aaKnown RBP5.76□□□□□ -1.49
ECHDC1-205ENST00000368295 PLPP6Q8IY26 295 aa5.76□□□□□ -1.49
ECHDC1-205ENST00000368295 RAPGEF3O95398 923 aa5.75□□□□□ -1.49
ECHDC1-205ENST00000368295 CUL7Q14999 1698 aa5.74□□□□□ -1.49
ECHDC1-205ENST00000368295 ARIH1Q9Y4X5 557 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-205ENST00000368295 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-205ENST00000368295 GFRA3O60609 400 aa5.73□□□□□ -1.49
ECHDC1-205ENST00000368295 CCDC88BA6NC98 1476 aa5.73□□□□□ -1.49
ECHDC1-205ENST00000368295 ABCA5Q8WWZ7 1642 aa5.73□□□□□ -1.49
ECHDC1-205ENST00000368295 RBM33Q96EV2 1170 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-205ENST00000368295 CFAP43Q8NDM7 1665 aa5.72□□□□□ -1.49
ECHDC1-205ENST00000368295 TOP2AP11388 1531 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-205ENST00000368295 KIAA0586Q9BVV6 1533 aa5.72□□□□□ -1.49
ECHDC1-205ENST00000368295 DMRTA1Q5VZB9 504 aa5.72□□□□□ -1.49
ECHDC1-205ENST00000368295 THSD4Q6ZMP0 1018 aa5.72□□□□□ -1.49
ECHDC1-205ENST00000368295 XP32Q5T750 250 aa5.71□□□□□ -1.49
ECHDC1-205ENST00000368295 SETBP1Q9Y6X0 1596 aa5.71□□□□□ -1.5
ECHDC1-205ENST00000368295 CUX1P39880 1505 aa5.71□□□□□ -1.5
ECHDC1-205ENST00000368295 PTPRGP23470 1445 aa5.71□□□□□ -1.5
ECHDC1-205ENST00000368295 CD109Q6YHK3 1445 aa5.71□□□□□ -1.5
ECHDC1-205ENST00000368295 ITGBL1O95965 494 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-205ENST00000368295 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
ECHDC1-205ENST00000368295 EMILIN3Q9NT22 766 aa5.71□□□□□ -1.5
ECHDC1-205ENST00000368295 SPDYE16A6NNV3 312 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-205ENST00000368295 NRG2O14511 850 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-205ENST00000368295 EIF5BO60841 1220 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-205ENST00000368295 SLC34A2O95436 690 aa5.7□□□□□ -1.5
ECHDC1-205ENST00000368295 TRIM52Q96A61 297 aa5.7□□□□□ -1.5
ECHDC1-205ENST00000368295 KCNH8Q96L42 1107 aa5.7□□□□□ -1.5
ECHDC1-205ENST00000368295 RUSC2Q8N2Y8 1516 aa5.69□□□□□ -1.5
ECHDC1-205ENST00000368295 PCDHGA4Q9Y5G9 962 aa5.69□□□□□ -1.5
ECHDC1-205ENST00000368295 PREX1Q8TCU6 1659 aa5.69□□□□□ -1.5
ECHDC1-205ENST00000368295 FHAD1B1AJZ9 1412 aa5.69□□□□□ -1.5
ECHDC1-205ENST00000368295 SIGLEC1Q9BZZ2 1709 aa5.69□□□□□ -1.5
ECHDC1-205ENST00000368295 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
ECHDC1-205ENST00000368295 DPYSL4O14531 572 aa5.69□□□□□ -1.5
ECHDC1-205ENST00000368295 TBC1D12O60347 775 aa5.68□□□□□ -1.5
ECHDC1-205ENST00000368295 MAP3K9P80192 1104 aa5.68□□□□□ -1.5
ECHDC1-205ENST00000368295 OXER1Q8TDS5 423 aa5.68□□□□□ -1.5
ECHDC1-205ENST00000368295 PSEN2P49810 448 aa5.67□□□□□ -1.5
ECHDC1-205ENST00000368295 PDIA6Q15084 440 aa5.67□□□□□ -1.5
ECHDC1-205ENST00000368295 MAGI3Q5TCQ9 1506 aa5.67□□□□□ -1.5
ECHDC1-205ENST00000368295 UHRF1BP1Q6BDS2 1440 aa5.67□□□□□ -1.5
ECHDC1-205ENST00000368295 TOM1O60784 492 aa5.67□□□□□ -1.5
ECHDC1-205ENST00000368295 ALKQ9UM73 1620 aa5.67□□□□□ -1.5
ECHDC1-205ENST00000368295 SMYD5Q6GMV2 418 aa5.66□□□□□ -1.5
ECHDC1-205ENST00000368295 PTCD2Q8WV60 388 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-205ENST00000368295 ABCA10Q8WWZ4 1543 aa5.66□□□□□ -1.5
ECHDC1-205ENST00000368295 SENP3-EIF4A1A0A087X0R7 540 aa5.66□□□□□ -1.5
ECHDC1-205ENST00000368295 TESPA1A2RU30 521 aaPredicted RBP5.66□□□□□ -1.5
ECHDC1-205ENST00000368295 GOLGA8CPA6NN73 597 aa5.66□□□□□ -1.5
ECHDC1-205ENST00000368295 NCOA1Q15788 1441 aa5.65□□□□□ -1.5
ECHDC1-205ENST00000368295 ARAP3Q8WWN8 1544 aa5.65□□□□□ -1.5
ECHDC1-205ENST00000368295 TTC37Q6PGP7 1564 aa5.64□□□□□ -1.51
ECHDC1-205ENST00000368295 SEMA3EO15041 775 aa5.64□□□□□ -1.51
ECHDC1-205ENST00000368295 FRMPD1Q5SYB0 1578 aa5.64□□□□□ -1.51
ECHDC1-205ENST00000368295 WDR7Q9Y4E6 1490 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms