RNA–Protein interactions for RNA: ENST00000361427.5

HMGN2-201, Transcript of high mobility group nucleosomal binding domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2-201ENST00000361427 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
HMGN2-201ENST00000361427 KCNK17Q96T54 332 aa11.54□□□□□ -0.56
HMGN2-201ENST00000361427 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
HMGN2-201ENST00000361427 TBC1D12O60347 775 aa11.53□□□□□ -0.56
HMGN2-201ENST00000361427 PTPN5P54829 565 aa11.53□□□□□ -0.56
HMGN2-201ENST00000361427 DSG2Q14126 1118 aa11.53□□□□□ -0.56
HMGN2-201ENST00000361427 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
HMGN2-201ENST00000361427 MAPKBP1O60336 1514 aa11.53□□□□□ -0.56
HMGN2-201ENST00000361427 ABCC2Q92887 1545 aa11.52□□□□□ -0.57
HMGN2-201ENST00000361427 SAMD9Q5K651 1589 aa11.51□□□□□ -0.57
HMGN2-201ENST00000361427 TTBK1Q5TCY1 1321 aaPredicted RBP11.51□□□□□ -0.57
HMGN2-201ENST00000361427 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
HMGN2-201ENST00000361427 ABCC10Q5T3U5 1492 aa11.49□□□□□ -0.57
HMGN2-201ENST00000361427 PLB1Q6P1J6 1458 aa11.49□□□□□ -0.57
HMGN2-201ENST00000361427 KDM5BQ9UGL1 1544 aa11.49□□□□□ -0.57
HMGN2-201ENST00000361427 BHMG1C9JSJ3 638 aaPredicted RBP11.48□□□□□ -0.57
HMGN2-201ENST00000361427 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
HMGN2-201ENST00000361427 SLC4A5Q9BY07 1137 aa11.48□□□□□ -0.57
HMGN2-201ENST00000361427 PODXL2Q9NZ53 605 aa11.48□□□□□ -0.57
HMGN2-201ENST00000361427 ABCA8O94911 1581 aa11.48□□□□□ -0.57
HMGN2-201ENST00000361427 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
HMGN2-201ENST00000361427 RANGAP1P46060 587 aaPredicted RBP11.47□□□□□ -0.57
HMGN2-201ENST00000361427 KCNH8Q96L42 1107 aa11.47□□□□□ -0.57
HMGN2-201ENST00000361427 THSD4Q6ZMP0 1018 aa11.45□□□□□ -0.58
HMGN2-201ENST00000361427 OXER1Q8TDS5 423 aa11.45□□□□□ -0.58
HMGN2-201ENST00000361427 IRX2Q9BZI1 471 aaPredicted RBP11.45□□□□□ -0.58
HMGN2-201ENST00000361427 BCL2L12Q9HB09 334 aa11.45□□□□□ -0.58
HMGN2-201ENST00000361427 DIP2BQ9P265 1576 aa11.45□□□□□ -0.58
HMGN2-201ENST00000361427 ASXL2Q76L83 1435 aa11.44□□□□□ -0.58
HMGN2-201ENST00000361427 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
HMGN2-201ENST00000361427 A0A0G2JS52 829 aa11.43□□□□□ -0.58
HMGN2-201ENST00000361427 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
HMGN2-201ENST00000361427 EFCAB5A4FU69 1503 aa11.43□□□□□ -0.58
HMGN2-201ENST00000361427 ZCCHC11Q5TAX3 1644 aaKnown RBP11.42□□□□□ -0.58
HMGN2-201ENST00000361427 ZNF454Q8N9F8 522 aa11.42□□□□□ -0.58
HMGN2-201ENST00000361427 FHOD3Q2V2M9 1422 aa11.42□□□□□ -0.58
HMGN2-201ENST00000361427 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
HMGN2-201ENST00000361427 GLI2P10070 1586 aa11.4□□□□□ -0.58
HMGN2-201ENST00000361427 ATP10BO94823 1461 aa11.39□□□□□ -0.59
HMGN2-201ENST00000361427 ARHGAP35Q9NRY4 1499 aa11.39□□□□□ -0.59
HMGN2-201ENST00000361427 ZBED2Q9BTP6 218 aa11.39□□□□□ -0.59
HMGN2-201ENST00000361427 EPRSP07814 1512 aaKnown RBP11.39□□□□□ -0.59
HMGN2-201ENST00000361427 FOSBP53539 338 aa11.38□□□□□ -0.59
HMGN2-201ENST00000361427 WNT2BQ93097 391 aa11.38□□□□□ -0.59
HMGN2-201ENST00000361427 RAPGEF6Q8TEU7 1601 aa11.38□□□□□ -0.59
HMGN2-201ENST00000361427 NUP153P49790 1475 aaKnown RBP11.38□□□□□ -0.59
HMGN2-201ENST00000361427 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
HMGN2-201ENST00000361427 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
HMGN2-201ENST00000361427 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
HMGN2-201ENST00000361427 PTPREP23469 700 aa11.35□□□□□ -0.59
HMGN2-201ENST00000361427 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
HMGN2-201ENST00000361427 GOLGA8CPA6NN73 597 aa11.34□□□□□ -0.59
HMGN2-201ENST00000361427 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
HMGN2-201ENST00000361427 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
HMGN2-201ENST00000361427 MAP3K4Q9Y6R4 1608 aa11.33□□□□□ -0.6
HMGN2-201ENST00000361427 FMN1Q68DA7 1419 aa11.33□□□□□ -0.6
HMGN2-201ENST00000361427 PPRC1Q5VV67 1664 aaKnown RBP11.33□□□□□ -0.6
HMGN2-201ENST00000361427 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
HMGN2-201ENST00000361427 ARHGEF1Q92888 912 aaKnown RBP11.32□□□□□ -0.6
HMGN2-201ENST00000361427 CRISPLD2Q9H0B8 497 aa11.31□□□□□ -0.6
HMGN2-201ENST00000361427 TSPOAP1O95153 1857 aa11.3□□□□□ -0.6
HMGN2-201ENST00000361427 CLIP1P30622 1438 aa11.28□□□□□ -0.6
HMGN2-201ENST00000361427 ADAM33Q9BZ11 813 aa11.28□□□□□ -0.6
HMGN2-201ENST00000361427 MAGI3Q5TCQ9 1506 aa11.28□□□□□ -0.6
HMGN2-201ENST00000361427 ZDHHC16Q969W1 377 aa11.27□□□□□ -0.61
HMGN2-201ENST00000361427 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.61
HMGN2-201ENST00000361427 CD109Q6YHK3 1445 aa11.26□□□□□ -0.61
HMGN2-201ENST00000361427 CDK13Q14004 1512 aaKnown RBP11.26□□□□□ -0.61
HMGN2-201ENST00000361427 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
HMGN2-201ENST00000361427 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
HMGN2-201ENST00000361427 ABCA9Q8IUA7 1624 aa11.26□□□□□ -0.61
HMGN2-201ENST00000361427 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
HMGN2-201ENST00000361427 TEX14Q8IWB6 1497 aa11.25□□□□□ -0.61
HMGN2-201ENST00000361427 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
HMGN2-201ENST00000361427 HECW1Q76N89 1606 aa11.25□□□□□ -0.61
HMGN2-201ENST00000361427 LOC105371045A0A1W2PR82 267 aa11.25□□□□□ -0.61
HMGN2-201ENST00000361427 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
HMGN2-201ENST00000361427 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
HMGN2-201ENST00000361427 EVI5O60447 810 aa11.24□□□□□ -0.61
HMGN2-201ENST00000361427 KDM6BO15054 1643 aa11.24□□□□□ -0.61
HMGN2-201ENST00000361427 TESPA1A2RU30 521 aaPredicted RBP11.23□□□□□ -0.61
HMGN2-201ENST00000361427 ZMYND15Q9H091 742 aa11.23□□□□□ -0.61
HMGN2-201ENST00000361427 CEP162Q5TB80 1403 aa11.23□□□□□ -0.61
HMGN2-201ENST00000361427 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
HMGN2-201ENST00000361427 PCF11O94913 1555 aaKnown RBP11.22□□□□□ -0.61
HMGN2-201ENST00000361427 FYCO1Q9BQS8 1478 aa11.21□□□□□ -0.61
HMGN2-201ENST00000361427 NCKAP5LQ9HCH0 1330 aa11.21□□□□□ -0.61
HMGN2-201ENST00000361427 SEMA3EO15041 775 aa11.21□□□□□ -0.61
HMGN2-201ENST00000361427 ZMYND10O75800 440 aa11.21□□□□□ -0.61
HMGN2-201ENST00000361427 E2F4Q16254 413 aa11.21□□□□□ -0.61
HMGN2-201ENST00000361427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.2□□□□□ -0.628e-44■■□□□ 13.2
HMGN2-201ENST00000361427 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
HMGN2-201ENST00000361427 RABGEF1Q9UJ41 708 aa11.2□□□□□ -0.62
HMGN2-201ENST00000361427 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
HMGN2-201ENST00000361427 TRIM26Q12899 539 aaPredicted RBP11.19□□□□□ -0.62
HMGN2-201ENST00000361427 SMYD5Q6GMV2 418 aa11.19□□□□□ -0.62
HMGN2-201ENST00000361427 CDK11AQ9UQ88 783 aaPredicted RBP11.19□□□□□ -0.62
HMGN2-201ENST00000361427 ARAP3Q8WWN8 1544 aa11.19□□□□□ -0.62
HMGN2-201ENST00000361427 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
HMGN2-201ENST00000361427 PHLDB1Q86UU1 1377 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms