RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ADGRB3O60242 1522 aa8.6□□□□□ -1.03
CD47-201ENST00000355354 DUOX2Q9NRD8 1548 aa8.6□□□□□ -1.03
CD47-201ENST00000355354 SUPT16HQ9Y5B9 1047 aaKnown RBP8.6□□□□□ -1.03
CD47-201ENST00000355354 NLRP1Q9C000 1473 aa8.6□□□□□ -1.03
CD47-201ENST00000355354 DDX10Q13206 875 aaKnown RBP8.59□□□□□ -1.03
CD47-201ENST00000355354 LRRC7Q96NW7 1537 aa8.59□□□□□ -1.03
CD47-201ENST00000355354 NOS1P29475 1434 aa8.58□□□□□ -1.04
CD47-201ENST00000355354 HTTP42858 3142 aa8.58□□□□□ -1.04
CD47-201ENST00000355354 ZFYVE9O95405 1425 aa8.58□□□□□ -1.04
CD47-201ENST00000355354 SETBP1Q9Y6X0 1596 aa8.58□□□□□ -1.04
CD47-201ENST00000355354 ROBO1Q9Y6N7 1651 aa8.58□□□□□ -1.04
CD47-201ENST00000355354 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.57□□□□□ -1.04
CD47-201ENST00000355354 MIA2Q96PC5 1412 aa8.57□□□□□ -1.04
CD47-201ENST00000355354 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.57□□□□□ -1.04
CD47-201ENST00000355354 AHDC1Q5TGY3 1603 aaPredicted RBP8.57□□□□□ -1.04
CD47-201ENST00000355354 AEBP2Q6ZN18 517 aaPredicted RBP8.57□□□□□ -1.04
CD47-201ENST00000355354 ERBINQ96RT1 1412 aa8.56□□□□□ -1.04
CD47-201ENST00000355354 UHRF1BP1Q6BDS2 1440 aa8.56□□□□□ -1.04
CD47-201ENST00000355354 ASPMQ8IZT6 3477 aa8.56□□□□□ -1.04
CD47-201ENST00000355354 DHX29Q7Z478 1369 aaKnown RBP8.55□□□□□ -1.04
CD47-201ENST00000355354 ZNF316A6NFI3 1004 aaPredicted RBP8.55□□□□□ -1.04
CD47-201ENST00000355354 ZMYM3Q14202 1370 aa8.53□□□□□ -1.04
CD47-201ENST00000355354 VPS8Q8N3P4 1428 aa8.53□□□□□ -1.04
CD47-201ENST00000355354 ZNF644Q9H582 1327 aaPredicted RBP8.52□□□□□ -1.04
CD47-201ENST00000355354 CFAP65Q6ZU64 1925 aaKnown RBP8.52□□□□□ -1.05
CD47-201ENST00000355354 RPRD2Q5VT52 1461 aaKnown RBP8.52□□□□□ -1.05
CD47-201ENST00000355354 COL6A3P12111 3177 aa8.52□□□□□ -1.05
CD47-201ENST00000355354 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.05
CD47-201ENST00000355354 LAMA1P25391 3075 aa8.51□□□□□ -1.05
CD47-201ENST00000355354 ABCC5O15440 1437 aa8.51□□□□□ -1.05
CD47-201ENST00000355354 CLTCL1P53675 1640 aa8.5□□□□□ -1.05
CD47-201ENST00000355354 NEXMIFQ5QGS0 1516 aa8.5□□□□□ -1.05
CD47-201ENST00000355354 AFAP1Q8N556 730 aa8.49□□□□□ -1.05
CD47-201ENST00000355354 BPTFQ12830 3046 aa8.49□□□□□ -1.05
CD47-201ENST00000355354 PPP6R1Q9UPN7 881 aa8.48□□□□□ -1.05
CD47-201ENST00000355354 MYOM3Q5VTT5 1437 aa8.48□□□□□ -1.05
CD47-201ENST00000355354 PHLPP1O60346 1717 aa8.48□□□□□ -1.05
CD47-201ENST00000355354 COL24A1Q17RW2 1714 aa8.47□□□□□ -1.05
CD47-201ENST00000355354 NRAPQ86VF7 1730 aa8.47□□□□□ -1.05
CD47-201ENST00000355354 TRPM3Q9HCF6 1732 aaPredicted RBP8.47□□□□□ -1.05
CD47-201ENST00000355354 WNK3Q9BYP7 1800 aa8.47□□□□□ -1.05
CD47-201ENST00000355354 NKTRP30414 1462 aaKnown RBP8.47□□□□□ -1.05
CD47-201ENST00000355354 DAPK1P53355 1430 aa8.46□□□□□ -1.05
CD47-201ENST00000355354 CERKQ8TCT0 537 aa8.46□□□□□ -1.06
CD47-201ENST00000355354 KIF1BO60333 1816 aa8.46□□□□□ -1.06
CD47-201ENST00000355354 USP32Q8NFA0 1604 aa8.45□□□□□ -1.06
CD47-201ENST00000355354 USP54Q70EL1 1684 aa8.45□□□□□ -1.06
CD47-201ENST00000355354 PLEKHD1A6NEE1 506 aa8.45□□□□□ -1.06
CD47-201ENST00000355354 TOPAZ1Q8N9V7 1692 aa8.45□□□□□ -1.06
CD47-201ENST00000355354 CHIC2Q9UKJ5 165 aa8.44□□□□□ -1.06
CD47-201ENST00000355354 REV3LO60673 3130 aa8.44□□□□□ -1.06
CD47-201ENST00000355354 ASXL1Q8IXJ9 1541 aa8.44□□□□□ -1.06
CD47-201ENST00000355354 EFCAB2Q5VUJ9 269 aa8.44□□□□□ -1.06
CD47-201ENST00000355354 TRPM2O94759 1503 aa8.44□□□□□ -1.06
CD47-201ENST00000355354 RGPD8O14715 1765 aaPredicted RBP8.43□□□□□ -1.06
CD47-201ENST00000355354 FMN2Q9NZ56 1722 aa8.43□□□□□ -1.06
CD47-201ENST00000355354 PAK3O75914 559 aaPredicted RBP8.43□□□□□ -1.06
CD47-201ENST00000355354 NBPF8Q3BBV2 869 aa8.43□□□□□ -1.06
CD47-201ENST00000355354 ILDR2Q71H61 639 aa8.43□□□□□ -1.06
CD47-201ENST00000355354 RAB3GAP2Q9H2M9 1393 aa8.43□□□□□ -1.06
CD47-201ENST00000355354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.42□□□□□ -1.06
CD47-201ENST00000355354 ALS2Q96Q42 1657 aa8.42□□□□□ -1.06
CD47-201ENST00000355354 SENP3Q9H4L4 574 aaPredicted RBP8.41□□□□□ -1.06
CD47-201ENST00000355354 BRWD3Q6RI45 1802 aa8.41□□□□□ -1.06
CD47-201ENST00000355354 ATP1B4Q9UN42 357 aaPredicted RBP8.41□□□□□ -1.06
CD47-201ENST00000355354 PPP1R15AO75807 674 aaPredicted RBP8.41□□□□□ -1.06
CD47-201ENST00000355354 ADAMTS13Q76LX8 1427 aa8.41□□□□□ -1.06
CD47-201ENST00000355354 ADGRB2O60241 1585 aa8.4□□□□□ -1.06
CD47-201ENST00000355354 SCAF11Q99590 1463 aaKnown RBP8.4□□□□□ -1.06
CD47-201ENST00000355354 NRXN1Q9ULB1 1477 aa8.4□□□□□ -1.07
CD47-201ENST00000355354 FGD6Q6ZV73 1430 aa8.4□□□□□ -1.07
CD47-201ENST00000355354 LRP6O75581 1613 aa8.39□□□□□ -1.07
CD47-201ENST00000355354 TNS1Q9HBL0 1735 aaKnown RBP8.39□□□□□ -1.07
CD47-201ENST00000355354 HSPA2P54652 639 aa8.38□□□□□ -1.07
CD47-201ENST00000355354 NPHP4O75161 1426 aaPredicted RBP8.38□□□□□ -1.07
CD47-201ENST00000355354 NCOA3Q9Y6Q9 1424 aa8.38□□□□□ -1.07
CD47-201ENST00000355354 CEBPAP49715 358 aaPredicted RBP8.38□□□□□ -1.07
CD47-201ENST00000355354 NWD2Q9ULI1 1742 aa8.37□□□□□ -1.07
CD47-201ENST00000355354 RGPD3A6NKT7 1758 aaPredicted RBP8.37□□□□□ -1.07
CD47-201ENST00000355354 RGPD4Q7Z3J3 1758 aa8.37□□□□□ -1.07
CD47-201ENST00000355354 PLCH1Q4KWH8 1693 aa8.37□□□□□ -1.07
CD47-201ENST00000355354 RREB1Q92766 1687 aa8.36□□□□□ -1.07
CD47-201ENST00000355354 FREM2Q5SZK8 3169 aa8.36□□□□□ -1.07
CD47-201ENST00000355354 PTPRUQ92729 1446 aa8.35□□□□□ -1.07
CD47-201ENST00000355354 WASHC2AQ641Q2 1341 aa8.35□□□□□ -1.07
CD47-201ENST00000355354 FKBP8Q14318 412 aa8.35□□□□□ -1.07
CD47-201ENST00000355354 RRP7BPQ9NSQ0 103 aa8.35□□□□□ -1.07
CD47-201ENST00000355354 ROCK1Q13464 1354 aa8.35□□□□□ -1.07
CD47-201ENST00000355354 DCHS1Q96JQ0 3298 aa8.35□□□□□ -1.07
CD47-201ENST00000355354 KIF1AQ12756 1690 aa8.34□□□□□ -1.07
CD47-201ENST00000355354 FAM135BQ49AJ0 1406 aa8.34□□□□□ -1.07
CD47-201ENST00000355354 TNRQ92752 1358 aa8.34□□□□□ -1.07
CD47-201ENST00000355354 RGS17Q9UGC6 210 aaPredicted RBP8.34□□□□□ -1.07
CD47-201ENST00000355354 KIAA1210Q9ULL0 1709 aa8.34□□□□□ -1.07
CD47-201ENST00000355354 DMDP11532 3685 aa8.34□□□□□ -1.07
CD47-201ENST00000355354 PKD2Q13563 968 aa8.34□□□□□ -1.07
CD47-201ENST00000355354 CDC42BPGQ6DT37 1551 aa8.34□□□□□ -1.07
CD47-201ENST00000355354 ARHGEF28Q8N1W1 1705 aaKnown RBP8.33□□□□□ -1.08
CD47-201ENST00000355354 FRYQ5TBA9 3013 aa8.32□□□□□ -1.08
CD47-201ENST00000355354 LRP5O75197 1615 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms