RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 MIA2Q96PC5 1412 aa6.52□□□□□ -1.36
HMBOX1-202ENST00000355231 FAM50AQ14320 339 aaKnown RBP6.52□□□□□ -1.37
HMBOX1-202ENST00000355231 GGT6Q6P531 493 aa6.52□□□□□ -1.37
HMBOX1-202ENST00000355231 CERKQ8TCT0 537 aa6.52□□□□□ -1.37
HMBOX1-202ENST00000355231 AGLP35573 1532 aa6.52□□□□□ -1.37
HMBOX1-202ENST00000355231 ZMYM3Q14202 1370 aa6.52□□□□□ -1.37
HMBOX1-202ENST00000355231 PREX2Q70Z35 1606 aa6.52□□□□□ -1.37
HMBOX1-202ENST00000355231 SYCP2Q9BX26 1530 aa6.52□□□□□ -1.37
HMBOX1-202ENST00000355231 FAM43AQ8N2R8 423 aa6.52□□□□□ -1.37
HMBOX1-202ENST00000355231 KIDINS220Q9ULH0 1771 aa6.51□□□□□ -1.37
HMBOX1-202ENST00000355231 CDC42BPAQ5VT25 1732 aa6.51□□□□□ -1.37
HMBOX1-202ENST00000355231 HSP90B1P14625 803 aaKnown RBP6.51□□□□□ -1.37
HMBOX1-202ENST00000355231 HSP90AA2PQ14568 343 aaPredicted RBP6.51□□□□□ -1.37
HMBOX1-202ENST00000355231 REREQ9P2R6 1566 aa6.51□□□□□ -1.37
HMBOX1-202ENST00000355231 WASHC2CQ9Y4E1 1318 aa6.5□□□□□ -1.37
HMBOX1-202ENST00000355231 ITGAEP38570 1179 aa6.5□□□□□ -1.37
HMBOX1-202ENST00000355231 FBXO31Q5XUX0 539 aaPredicted RBP6.5□□□□□ -1.37
HMBOX1-202ENST00000355231 ESF1Q9H501 851 aaKnown RBP6.5□□□□□ -1.37
HMBOX1-202ENST00000355231 NAIPQ13075 1403 aa6.5□□□□□ -1.37
HMBOX1-202ENST00000355231 GCC2Q8IWJ2 1684 aa6.5□□□□□ -1.37
HMBOX1-202ENST00000355231 NCKAP5LQ9HCH0 1330 aa6.49□□□□□ -1.37
HMBOX1-202ENST00000355231 A2MP01023 1474 aa6.49□□□□□ -1.37
HMBOX1-202ENST00000355231 DHX29Q7Z478 1369 aaKnown RBP6.49□□□□□ -1.37
HMBOX1-202ENST00000355231 KIF3BO15066 747 aa6.49□□□□□ -1.37
HMBOX1-202ENST00000355231 UHRF1BP1Q6BDS2 1440 aa6.48□□□□□ -1.37
HMBOX1-202ENST00000355231 ITSN2Q9NZM3 1697 aa6.48□□□□□ -1.37
HMBOX1-202ENST00000355231 CENPJQ9HC77 1338 aaPredicted RBP6.48□□□□□ -1.37
HMBOX1-202ENST00000355231 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
HMBOX1-202ENST00000355231 FER1L4A9Z1Z3 1794 aa6.48□□□□□ -1.37
HMBOX1-202ENST00000355231 CALD1Q05682 793 aaKnown RBP6.48□□□□□ -1.37
HMBOX1-202ENST00000355231 SPDYE1Q8NFV5 336 aaPredicted RBP6.48□□□□□ -1.37
HMBOX1-202ENST00000355231 WASHC2AQ641Q2 1341 aa6.48□□□□□ -1.37
HMBOX1-202ENST00000355231 ATP7AQ04656 1500 aa6.47□□□□□ -1.37
HMBOX1-202ENST00000355231 RTEL1-TNFRSF6BF6WH68 1400 aa6.47□□□□□ -1.37
HMBOX1-202ENST00000355231 IPO4Q8TEX9 1081 aaKnown RBP6.47□□□□□ -1.37
HMBOX1-202ENST00000355231 CHMP4AQ9BY43 222 aa6.47□□□□□ -1.37
HMBOX1-202ENST00000355231 CNTLNQ9NXG0 1405 aa6.47□□□□□ -1.37
HMBOX1-202ENST00000355231 CLEC11AQ9Y240 323 aa6.47□□□□□ -1.37
HMBOX1-202ENST00000355231 DNMT1P26358 1616 aaKnown RBP6.47□□□□□ -1.37
HMBOX1-202ENST00000355231 STRCQ7RTU9 1775 aa6.46□□□□□ -1.37
HMBOX1-202ENST00000355231 CDK11BP21127 795 aaKnown RBP6.46□□□□□ -1.37
HMBOX1-202ENST00000355231 CNGB1Q14028 1251 aaPredicted RBP6.46□□□□□ -1.37
HMBOX1-202ENST00000355231 PLXNC1O60486 1568 aa6.46□□□□□ -1.38
HMBOX1-202ENST00000355231 NPATQ14207 1427 aa6.46□□□□□ -1.38
HMBOX1-202ENST00000355231 HSP90AA1P07900 732 aaKnown RBP6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 C14orf37Q86TY3 774 aa6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 PIP4P2Q8N4L2 257 aa6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 C3P01024 1663 aa6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 INO80Q9ULG1 1556 aaPredicted RBP6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 ROCK1Q13464 1354 aa6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 PTPRTO14522 1441 aa6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 NCOA1Q15788 1441 aa6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 HMGB1P09429 215 aaKnown RBP6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 TSPY4P0CV99 314 aa6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 TSPY10P0CW01 314 aa6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 FXR2P51116 673 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 NAP1L2Q9ULW6 460 aaPredicted RBP6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 ZNF335Q9H4Z2 1342 aaPredicted RBP6.45□□□□□ -1.38
HMBOX1-202ENST00000355231 DAPK1P53355 1430 aa6.44□□□□□ -1.38
HMBOX1-202ENST00000355231 SETD1BQ9UPS6 1966 aaKnown RBP6.44□□□□□ -1.38
HMBOX1-202ENST00000355231 CAMSAP2Q08AD1 1489 aa6.44□□□□□ -1.38
HMBOX1-202ENST00000355231 PPM1GO15355 546 aaPredicted RBP6.44□□□□□ -1.38
HMBOX1-202ENST00000355231 NBR1Q14596 966 aa6.44□□□□□ -1.38
HMBOX1-202ENST00000355231 ABCC5O15440 1437 aa6.44□□□□□ -1.38
HMBOX1-202ENST00000355231 CCDC141Q6ZP82 1450 aa6.44□□□□□ -1.38
HMBOX1-202ENST00000355231 CANXP27824 592 aaKnown RBP6.43□□□□□ -1.38
HMBOX1-202ENST00000355231 ANP32AP39687 249 aaKnown RBP6.43□□□□□ -1.38
HMBOX1-202ENST00000355231 ADGRL2O95490 1459 aa6.43□□□□□ -1.38
HMBOX1-202ENST00000355231 PREX1Q8TCU6 1659 aa6.43□□□□□ -1.38
HMBOX1-202ENST00000355231 ARID3AQ99856 593 aa6.42□□□□□ -1.38
HMBOX1-202ENST00000355231 RRP7BPQ9NSQ0 103 aa6.42□□□□□ -1.38
HMBOX1-202ENST00000355231 LTBP4Q8N2S1 1624 aa6.42□□□□□ -1.38
HMBOX1-202ENST00000355231 CROCC2H7BZ55 1655 aa6.42□□□□□ -1.38
HMBOX1-202ENST00000355231 PKD2Q13563 968 aa6.42□□□□□ -1.38
HMBOX1-202ENST00000355231 TEX2Q8IWB9 1127 aa6.42□□□□□ -1.38
HMBOX1-202ENST00000355231 ANP32BQ92688 251 aaKnown RBP6.42□□□□□ -1.38
HMBOX1-202ENST00000355231 ZBTB47Q9UFB7 747 aaPredicted RBP6.42□□□□□ -1.38
HMBOX1-202ENST00000355231 CAMSAP1Q5T5Y3 1602 aa6.41□□□□□ -1.38
HMBOX1-202ENST00000355231 POTEMA6NI47 508 aa6.41□□□□□ -1.38
HMBOX1-202ENST00000355231 NEFMP07197 916 aa6.41□□□□□ -1.38
HMBOX1-202ENST00000355231 CHIC2Q9UKJ5 165 aa6.41□□□□□ -1.38
HMBOX1-202ENST00000355231 TNRQ92752 1358 aa6.41□□□□□ -1.38
HMBOX1-202ENST00000355231 ADGBQ8N7X0 1667 aa6.41□□□□□ -1.38
HMBOX1-202ENST00000355231 CLTCQ00610 1675 aaKnown RBP6.4□□□□□ -1.38
HMBOX1-202ENST00000355231 SHANK2Q9UPX8 1470 aa6.4□□□□□ -1.38
HMBOX1-202ENST00000355231 VGFO15240 615 aaPredicted RBP6.4□□□□□ -1.38
HMBOX1-202ENST00000355231 CHADLQ6NUI6 762 aa6.4□□□□□ -1.38
HMBOX1-202ENST00000355231 SIN3AQ96ST3 1273 aa6.4□□□□□ -1.38
HMBOX1-202ENST00000355231 CREBZFQ9NS37 354 aa6.4□□□□□ -1.38
HMBOX1-202ENST00000355231 PAXIP1Q6ZW49 1069 aaPredicted RBP6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 FTSJ3Q8IY81 847 aaKnown RBP6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 BBXQ8WY36 941 aaPredicted RBP6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 IPO9Q96P70 1041 aaKnown RBP6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 ARHGEF5Q12774 1597 aa6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 PZPP20742 1482 aa6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 PPP1R15AO75807 674 aaPredicted RBP6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 PRR29P0C7W0 189 aa6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 MNX1P50219 401 aaPredicted RBP6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 IFFO2Q5TF58 517 aa6.39□□□□□ -1.39
HMBOX1-202ENST00000355231 BCANQ96GW7 911 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms