RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 ZRSR1Q15695 479 aaKnown RBP17.83■□□□□ 0.44
SPPL3-201ENST00000353487 PDCL3Q9H2J4 239 aa17.83■□□□□ 0.44
SPPL3-201ENST00000353487 CGNQ9P2M7 1197 aaKnown RBP17.82■□□□□ 0.44
SPPL3-201ENST00000353487 UQCRHLA0A096LP55 91 aa17.82■□□□□ 0.44
SPPL3-201ENST00000353487 UQCRHP07919 91 aa17.82■□□□□ 0.44
SPPL3-201ENST00000353487 LNPKQ9C0E8 428 aa17.81■□□□□ 0.44
SPPL3-201ENST00000353487 PRDM2Q13029 1718 aa17.81■□□□□ 0.44
SPPL3-201ENST00000353487 C8orf34Q49A92 452 aa17.81■□□□□ 0.44
SPPL3-201ENST00000353487 MAP3K1Q13233 1512 aa17.81■□□□□ 0.44
SPPL3-201ENST00000353487 LAMC3Q9Y6N6 1575 aa17.8■□□□□ 0.44
SPPL3-201ENST00000353487 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
SPPL3-201ENST00000353487 PDIA4P13667 645 aaKnown RBP17.79■□□□□ 0.44
SPPL3-201ENST00000353487 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
SPPL3-201ENST00000353487 ANKRD45Q5TZF3 282 aa17.79■□□□□ 0.44
SPPL3-201ENST00000353487 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
SPPL3-201ENST00000353487 CHMP4BQ9H444 224 aaKnown RBP17.79■□□□□ 0.44
SPPL3-201ENST00000353487 CARMIL2Q6F5E8 1435 aa17.78■□□□□ 0.44
SPPL3-201ENST00000353487 GOLGA6L4A6NEF3 574 aa17.78■□□□□ 0.44
SPPL3-201ENST00000353487 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
SPPL3-201ENST00000353487 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
SPPL3-201ENST00000353487 CASC1Q6TDU7 716 aa17.78■□□□□ 0.44
SPPL3-201ENST00000353487 VGLL3A8MV65 326 aa17.77■□□□□ 0.44
SPPL3-201ENST00000353487 SEC24BO95487 1268 aa17.77■□□□□ 0.44
SPPL3-201ENST00000353487 IGHDP01880 384 aa17.77■□□□□ 0.44
SPPL3-201ENST00000353487 PPP2R1AP30153 589 aa17.77■□□□□ 0.44
SPPL3-201ENST00000353487 PAXIP1Q6ZW49 1069 aaPredicted RBP17.77■□□□□ 0.44
SPPL3-201ENST00000353487 MCTP1Q6DN14 999 aa17.77■□□□□ 0.43
SPPL3-201ENST00000353487 EPRSP07814 1512 aaKnown RBP17.76■□□□□ 0.43
SPPL3-201ENST00000353487 IGSF3O75054 1194 aa17.76■□□□□ 0.43
SPPL3-201ENST00000353487 CUL7Q14999 1698 aa17.75■□□□□ 0.43
SPPL3-201ENST00000353487 SKOR2Q2VWA4 1001 aaPredicted RBP17.75■□□□□ 0.43
SPPL3-201ENST00000353487 SNAPC4Q5SXM2 1469 aa17.75■□□□□ 0.43
SPPL3-201ENST00000353487 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
SPPL3-201ENST00000353487 CAVIN1Q6NZI2 390 aaKnown RBP17.74■□□□□ 0.43
SPPL3-201ENST00000353487 ERICH4A6NGS2 130 aa17.74■□□□□ 0.43
SPPL3-201ENST00000353487 MRC2Q9UBG0 1479 aa17.74■□□□□ 0.43
SPPL3-201ENST00000353487 ANKRD30BQ9BXX2 1392 aa17.73■□□□□ 0.43
SPPL3-201ENST00000353487 CSPP1Q1MSJ5 1256 aa17.73■□□□□ 0.43
SPPL3-201ENST00000353487 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
SPPL3-201ENST00000353487 NPHP1O15259 732 aa17.72■□□□□ 0.43
SPPL3-201ENST00000353487 MTERF4Q7Z6M4 381 aaKnown RBP17.72■□□□□ 0.43
SPPL3-201ENST00000353487 DZIP1LQ8IYY4 767 aaKnown RBP17.71■□□□□ 0.43
SPPL3-201ENST00000353487 RNF123Q5XPI4 1314 aa17.71■□□□□ 0.43
SPPL3-201ENST00000353487 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
SPPL3-201ENST00000353487 XPCQ01831 940 aaPredicted RBP17.7■□□□□ 0.42
SPPL3-201ENST00000353487 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
SPPL3-201ENST00000353487 CCDC144AA2RUR9 1427 aa17.7■□□□□ 0.42
SPPL3-201ENST00000353487 PLB1Q6P1J6 1458 aa17.69■□□□□ 0.42
SPPL3-201ENST00000353487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.69■□□□□ 0.421e-6■■□□□ 14.5
SPPL3-201ENST00000353487 EHBP1L1Q8N3D4 1523 aa17.69■□□□□ 0.42
SPPL3-201ENST00000353487 CLCN1P35523 988 aa17.69■□□□□ 0.42
SPPL3-201ENST00000353487 IQGAP2Q13576 1575 aa17.68■□□□□ 0.42
SPPL3-201ENST00000353487 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
SPPL3-201ENST00000353487 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
SPPL3-201ENST00000353487 NRDCO43847 1150 aa17.67■□□□□ 0.42
SPPL3-201ENST00000353487 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
SPPL3-201ENST00000353487 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
SPPL3-201ENST00000353487 SUPT6HQ7KZ85 1726 aaKnown RBP17.67■□□□□ 0.42
SPPL3-201ENST00000353487 SPDYE4A6NLX3 237 aa17.66■□□□□ 0.42
SPPL3-201ENST00000353487 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
SPPL3-201ENST00000353487 SYAP1Q96A49 352 aaPredicted RBP17.66■□□□□ 0.42
SPPL3-201ENST00000353487 PDE3AQ14432 1141 aa17.65■□□□□ 0.42
SPPL3-201ENST00000353487 GOLGA6L6A8MZA4 724 aa17.65■□□□□ 0.42
SPPL3-201ENST00000353487 CCAR2Q8N163 923 aaKnown RBP17.65■□□□□ 0.42
SPPL3-201ENST00000353487 TCP11L2Q8N4U5 519 aa17.65■□□□□ 0.42
SPPL3-201ENST00000353487 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.65■□□□□ 0.42
SPPL3-201ENST00000353487 RBM25P49756 843 aaKnown RBP17.64■□□□□ 0.41
SPPL3-201ENST00000353487 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.41
SPPL3-201ENST00000353487 SKIDA1Q1XH10 827 aa17.63■□□□□ 0.41
SPPL3-201ENST00000353487 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
SPPL3-201ENST00000353487 DHX29Q7Z478 1369 aaKnown RBP17.63■□□□□ 0.41
SPPL3-201ENST00000353487 MAGI3Q5TCQ9 1506 aa17.63■□□□□ 0.41
SPPL3-201ENST00000353487 PRPF40AO75400 957 aaKnown RBP17.63■□□□□ 0.41
SPPL3-201ENST00000353487 TSR2Q969E8 191 aaKnown RBP17.63■□□□□ 0.41
SPPL3-201ENST00000353487 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
SPPL3-201ENST00000353487 CTTNBP2Q8WZ74 1663 aa17.63■□□□□ 0.41
SPPL3-201ENST00000353487 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
SPPL3-201ENST00000353487 CCDC66A2RUB6 948 aa17.62■□□□□ 0.41
SPPL3-201ENST00000353487 CCDC173Q0VFZ6 552 aa17.62■□□□□ 0.41
SPPL3-201ENST00000353487 DAPK1P53355 1430 aa17.62■□□□□ 0.41
SPPL3-201ENST00000353487 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
SPPL3-201ENST00000353487 SRPK2P78362 688 aaKnown RBP17.62■□□□□ 0.41
SPPL3-201ENST00000353487 STK26Q9P289 416 aa17.62■□□□□ 0.41
SPPL3-201ENST00000353487 C1orf115Q9H7X2 142 aa17.61■□□□□ 0.41
SPPL3-201ENST00000353487 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
SPPL3-201ENST00000353487 ABCC5O15440 1437 aa17.61■□□□□ 0.41
SPPL3-201ENST00000353487 PTPRGP23470 1445 aa17.61■□□□□ 0.41
SPPL3-201ENST00000353487 ANKRD50Q9ULJ7 1429 aa17.61■□□□□ 0.41
SPPL3-201ENST00000353487 KCNJ4P48050 445 aa17.6■□□□□ 0.41
SPPL3-201ENST00000353487 ZSCAN30Q86W11 494 aa17.6■□□□□ 0.41
SPPL3-201ENST00000353487 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
SPPL3-201ENST00000353487 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
SPPL3-201ENST00000353487 TNPO1Q92973 898 aaKnown RBP17.6■□□□□ 0.41
SPPL3-201ENST00000353487 KIAA0586Q9BVV6 1533 aa17.59■□□□□ 0.41
SPPL3-201ENST00000353487 ST18O60284 1047 aa17.59■□□□□ 0.41
SPPL3-201ENST00000353487 HECW1Q76N89 1606 aa17.59■□□□□ 0.41
SPPL3-201ENST00000353487 KIAA1107Q9UPP5 1409 aa17.59■□□□□ 0.41
SPPL3-201ENST00000353487 TBC1D32Q96NH3 1257 aa17.58■□□□□ 0.41
SPPL3-201ENST00000353487 TNNQ9UQP3 1299 aa17.58■□□□□ 0.41
SPPL3-201ENST00000353487 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms