RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 CPLX2Q6PUV4 134 aaKnown RBP19.07■□□□□ 0.64
PTPRO-202ENST00000348962 FGD6Q6ZV73 1430 aa19.06■□□□□ 0.64
PTPRO-202ENST00000348962 NOL8Q76FK4 1167 aaKnown RBP19.06■□□□□ 0.64
PTPRO-202ENST00000348962 FKBP5Q13451 457 aaPredicted RBP19.06■□□□□ 0.64
PTPRO-202ENST00000348962 DIAPH3Q9NSV4 1193 aa19.05■□□□□ 0.64
PTPRO-202ENST00000348962 CTDP1Q9Y5B0 961 aaPredicted RBP19.05■□□□□ 0.64
PTPRO-202ENST00000348962 RUFY2Q8WXA3 655 aa19.05■□□□□ 0.64
PTPRO-202ENST00000348962 GNAI1P63096 354 aa19.04■□□□□ 0.64
PTPRO-202ENST00000348962 CUX1P39880 1505 aa19.04■□□□□ 0.64
PTPRO-202ENST00000348962 TSPYL4Q9UJ04 414 aa19.03■□□□□ 0.64
PTPRO-202ENST00000348962 NECTIN2Q92692 538 aa19.03■□□□□ 0.64
PTPRO-202ENST00000348962 IFIT2P09913 472 aaKnown RBP19.03■□□□□ 0.64
PTPRO-202ENST00000348962 TMEM132EQ6IEE7 984 aa19.03■□□□□ 0.64
PTPRO-202ENST00000348962 G3BP1Q13283 466 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTPRO-202ENST00000348962 DDX19BQ9UMR2 479 aa19.03■□□□□ 0.64
PTPRO-202ENST00000348962 ESCO1Q5FWF5 840 aa19.02■□□□□ 0.64
PTPRO-202ENST00000348962 KLHL34Q8N239 644 aa19.02■□□□□ 0.64
PTPRO-202ENST00000348962 WASHC2AQ641Q2 1341 aa19.02■□□□□ 0.64
PTPRO-202ENST00000348962 RUNDC1Q96C34 613 aa19.02■□□□□ 0.64
PTPRO-202ENST00000348962 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.63
PTPRO-202ENST00000348962 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.63
PTPRO-202ENST00000348962 GGNBP2Q9H3C7 697 aa19.02■□□□□ 0.63
PTPRO-202ENST00000348962 RBM33Q96EV2 1170 aaKnown RBP19.01■□□□□ 0.63
PTPRO-202ENST00000348962 DCAF8L1A6NGE4 600 aa19.01■□□□□ 0.63
PTPRO-202ENST00000348962 FAM184AQ8NB25 1140 aa19.01■□□□□ 0.63
PTPRO-202ENST00000348962 ABTB2Q8N961 1025 aa19.01■□□□□ 0.63
PTPRO-202ENST00000348962 CABP2Q9NPB3 220 aa19.01■□□□□ 0.63
PTPRO-202ENST00000348962 ROCK1Q13464 1354 aa19■□□□□ 0.63
PTPRO-202ENST00000348962 H3BQV1 296 aa19■□□□□ 0.63
PTPRO-202ENST00000348962 IFFO2Q5TF58 517 aa19■□□□□ 0.63
PTPRO-202ENST00000348962 CENPQQ7L2Z9 268 aaPredicted RBP19■□□□□ 0.63
PTPRO-202ENST00000348962 HSP90AB4PQ58FF6 505 aa18.99■□□□□ 0.63
PTPRO-202ENST00000348962 APPP05067 770 aa18.99■□□□□ 0.63
PTPRO-202ENST00000348962 ZKSCAN1P17029 563 aaPredicted RBP18.99■□□□□ 0.63
PTPRO-202ENST00000348962 RAD21O60216 631 aa18.99■□□□□ 0.63
PTPRO-202ENST00000348962 MRC2Q9UBG0 1479 aa18.98■□□□□ 0.63
PTPRO-202ENST00000348962 FBXW7Q969H0 707 aa18.98■□□□□ 0.63
PTPRO-202ENST00000348962 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.98■□□□□ 0.63
PTPRO-202ENST00000348962 COG6Q9Y2V7 657 aa18.98■□□□□ 0.63
PTPRO-202ENST00000348962 HMOX1P09601 288 aa18.98■□□□□ 0.63
PTPRO-202ENST00000348962 RIC3Q7Z5B4 369 aa18.98■□□□□ 0.63
PTPRO-202ENST00000348962 RBM19Q9Y4C8 960 aaKnown RBP18.98■□□□□ 0.63
PTPRO-202ENST00000348962 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
PTPRO-202ENST00000348962 SLC52A1Q9NWF4 448 aa18.97■□□□□ 0.63
PTPRO-202ENST00000348962 TCEAL9Q9UHQ7 104 aa18.97■□□□□ 0.63
PTPRO-202ENST00000348962 TRDNQ13061 729 aa18.96■□□□□ 0.63
PTPRO-202ENST00000348962 CREBRFQ8IUR6 639 aa18.96■□□□□ 0.63
PTPRO-202ENST00000348962 DZIP1LQ8IYY4 767 aaKnown RBP18.96■□□□□ 0.63
PTPRO-202ENST00000348962 FYCO1Q9BQS8 1478 aa18.96■□□□□ 0.63
PTPRO-202ENST00000348962 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
PTPRO-202ENST00000348962 CASKIN1Q8WXD9 1431 aa18.96■□□□□ 0.63
PTPRO-202ENST00000348962 RRBP1Q9P2E9 1410 aaKnown RBP18.96■□□□□ 0.63
PTPRO-202ENST00000348962 CEP89Q96ST8 783 aa18.96■□□□□ 0.63
PTPRO-202ENST00000348962 ATP6V1DQ9Y5K8 247 aa18.96■□□□□ 0.63
PTPRO-202ENST00000348962 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
PTPRO-202ENST00000348962 PRDM2Q13029 1718 aa18.95■□□□□ 0.62
PTPRO-202ENST00000348962 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
PTPRO-202ENST00000348962 REC8O95072 547 aa18.95■□□□□ 0.62
PTPRO-202ENST00000348962 CFAP70Q5T0N1 1121 aa18.95■□□□□ 0.62
PTPRO-202ENST00000348962 NOC3LQ8WTT2 800 aaKnown RBP18.95■□□□□ 0.62
PTPRO-202ENST00000348962 PLEKHO1Q53GL0 409 aaPredicted RBP18.94■□□□□ 0.62
PTPRO-202ENST00000348962 POGZQ7Z3K3 1410 aa18.93■□□□□ 0.62
PTPRO-202ENST00000348962 DHX16O60231 1041 aaKnown RBP18.93■□□□□ 0.62
PTPRO-202ENST00000348962 GAS2L2Q8NHY3 880 aa18.93■□□□□ 0.62
PTPRO-202ENST00000348962 FOXD4L1Q9NU39 408 aa18.93■□□□□ 0.62
PTPRO-202ENST00000348962 PHF14O94880 888 aa18.93■□□□□ 0.62
PTPRO-202ENST00000348962 TRIM29Q14134 588 aa18.92■□□□□ 0.62
PTPRO-202ENST00000348962 RNF20Q5VTR2 975 aa18.92■□□□□ 0.62
PTPRO-202ENST00000348962 AIMP1Q12904 312 aaKnown RBP18.92■□□□□ 0.62
PTPRO-202ENST00000348962 SF3B2Q13435 895 aaKnown RBP18.92■□□□□ 0.62
PTPRO-202ENST00000348962 NCOA2Q15596 1464 aa18.92■□□□□ 0.62
PTPRO-202ENST00000348962 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
PTPRO-202ENST00000348962 CPLX1O14810 134 aa18.92■□□□□ 0.62
PTPRO-202ENST00000348962 ZBED9Q6R2W3 1325 aa18.92■□□□□ 0.62
PTPRO-202ENST00000348962 PLIN1O60240 522 aa18.91■□□□□ 0.62
PTPRO-202ENST00000348962 RRP1P56182 461 aaKnown RBP18.91■□□□□ 0.62
PTPRO-202ENST00000348962 SCAPERQ9BY12 1400 aa18.9■□□□□ 0.62
PTPRO-202ENST00000348962 CFTRP13569 1480 aa18.9■□□□□ 0.62
PTPRO-202ENST00000348962 PRAM1Q96QH2 718 aa18.9■□□□□ 0.62
PTPRO-202ENST00000348962 STRN4Q9NRL3 753 aa18.9■□□□□ 0.62
PTPRO-202ENST00000348962 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
PTPRO-202ENST00000348962 ERC2O15083 957 aa18.9■□□□□ 0.62
PTPRO-202ENST00000348962 CWC22Q9HCG8 908 aaKnown RBP18.9■□□□□ 0.62
PTPRO-202ENST00000348962 ZNF692Q9BU19 519 aaPredicted RBP18.89■□□□□ 0.61
PTPRO-202ENST00000348962 TATP17735 454 aaPredicted RBP18.89■□□□□ 0.61
PTPRO-202ENST00000348962 TPD52L1Q16890 204 aaPredicted RBP18.89■□□□□ 0.61
PTPRO-202ENST00000348962 ERICH2A1L162 156 aa18.88■□□□□ 0.61
PTPRO-202ENST00000348962 WWC1Q8IX03 1113 aa18.88■□□□□ 0.61
PTPRO-202ENST00000348962 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
PTPRO-202ENST00000348962 TPM3P06753 285 aa18.88■□□□□ 0.61
PTPRO-202ENST00000348962 MTHFSP49914 203 aa18.88■□□□□ 0.61
PTPRO-202ENST00000348962 NEUROD6Q96NK8 337 aa18.87■□□□□ 0.61
PTPRO-202ENST00000348962 PES1O00541 588 aaKnown RBP18.87■□□□□ 0.61
PTPRO-202ENST00000348962 MCTP1Q6DN14 999 aa18.87■□□□□ 0.61
PTPRO-202ENST00000348962 PRM3Q9NNZ6 103 aa18.87■□□□□ 0.61
PTPRO-202ENST00000348962 RAPGEF3O95398 923 aa18.87■□□□□ 0.61
PTPRO-202ENST00000348962 FAM161AQ3B820 660 aa18.87■□□□□ 0.61
PTPRO-202ENST00000348962 AMER1Q5JTC6 1135 aaPredicted RBP18.87■□□□□ 0.61
PTPRO-202ENST00000348962 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
PTPRO-202ENST00000348962 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms