RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 L1TD1Q5T7N2 865 aaKnown RBP25.95■■□□□ 1.74
UBC-201ENST00000339647 VIRMAQ69YN4 1812 aaKnown RBP25.95■■□□□ 1.74
UBC-201ENST00000339647 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
UBC-201ENST00000339647 AMER1Q5JTC6 1135 aaPredicted RBP25.94■■□□□ 1.74
UBC-201ENST00000339647 NUP160Q12769 1436 aa25.94■■□□□ 1.74
UBC-201ENST00000339647 APAF1O14727 1248 aa25.94■■□□□ 1.74
UBC-201ENST00000339647 ANTXR1Q9H6X2 564 aa25.94■■□□□ 1.74
UBC-201ENST00000339647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.93■■□□□ 1.743e-12■□□□□ 10.6
UBC-201ENST00000339647 NKTRP30414 1462 aaKnown RBP25.92■■□□□ 1.74
UBC-201ENST00000339647 WDR7Q9Y4E6 1490 aa25.92■■□□□ 1.74
UBC-201ENST00000339647 LAMC1P11047 1609 aa25.92■■□□□ 1.74
UBC-201ENST00000339647 ABCC10Q5T3U5 1492 aa25.92■■□□□ 1.74
UBC-201ENST00000339647 DMRT2Q9Y5R5 561 aa25.91■■□□□ 1.74
UBC-201ENST00000339647 NLRP1Q9C000 1473 aa25.9■■□□□ 1.74
UBC-201ENST00000339647 PANK1Q8TE04 598 aa25.89■■□□□ 1.74
UBC-201ENST00000339647 COG6Q9Y2V7 657 aa25.89■■□□□ 1.74
UBC-201ENST00000339647 MAPK8IP3Q9UPT6 1336 aa25.88■■□□□ 1.73
UBC-201ENST00000339647 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
UBC-201ENST00000339647 XRCC6P12956 609 aaKnown RBP eCLIP25.88■■□□□ 1.731e-13■□□□□ 10.4
UBC-201ENST00000339647 CLUAP1Q96AJ1 413 aa25.87■■□□□ 1.73
UBC-201ENST00000339647 CGNL1Q0VF96 1302 aa25.85■■□□□ 1.73
UBC-201ENST00000339647 CARMIL2Q6F5E8 1435 aa25.85■■□□□ 1.73
UBC-201ENST00000339647 TBC1D2Q9BYX2 928 aa25.85■■□□□ 1.73
UBC-201ENST00000339647 E9PSI1 815 aa25.84■■□□□ 1.73
UBC-201ENST00000339647 SPRYD3Q8NCJ5 442 aa25.84■■□□□ 1.73
UBC-201ENST00000339647 PANK2Q9BZ23 570 aa25.84■■□□□ 1.73
UBC-201ENST00000339647 MYO5CQ9NQX4 1742 aa25.84■■□□□ 1.73
UBC-201ENST00000339647 GZF1Q9H116 711 aaPredicted RBP25.83■■□□□ 1.73
UBC-201ENST00000339647 PDE3AQ14432 1141 aa25.82■■□□□ 1.72
UBC-201ENST00000339647 CANXP27824 592 aaKnown RBP25.82■■□□□ 1.72
UBC-201ENST00000339647 GOLGA6L3A6NEY3 463 aa25.81■■□□□ 1.72
UBC-201ENST00000339647 TBC1D32Q96NH3 1257 aa25.81■■□□□ 1.72
UBC-201ENST00000339647 NAP1L5Q96NT1 182 aaPredicted RBP25.81■■□□□ 1.72
UBC-201ENST00000339647 CCDC141Q6ZP82 1450 aa25.8■■□□□ 1.72
UBC-201ENST00000339647 PIK3C2GO75747 1445 aa25.8■■□□□ 1.72
UBC-201ENST00000339647 EIF2AK4Q9P2K8 1649 aaKnown RBP25.8■■□□□ 1.72
UBC-201ENST00000339647 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
UBC-201ENST00000339647 FSD2A1L4K1 749 aa25.79■■□□□ 1.72
UBC-201ENST00000339647 CENPJQ9HC77 1338 aaPredicted RBP25.78■■□□□ 1.72
UBC-201ENST00000339647 UPF2Q9HAU5 1272 aaKnown RBP25.78■■□□□ 1.72
UBC-201ENST00000339647 ATP10BO94823 1461 aa25.78■■□□□ 1.72
UBC-201ENST00000339647 ASXL1Q8IXJ9 1541 aa25.77■■□□□ 1.72
UBC-201ENST00000339647 PNNQ9H307 717 aaKnown RBP25.76■■□□□ 1.71
UBC-201ENST00000339647 CHD1O14646 1710 aa25.76■■□□□ 1.71
UBC-201ENST00000339647 MCM4P33991 863 aa25.76■■□□□ 1.71
UBC-201ENST00000339647 PCDHB15Q9Y5E8 787 aa25.75■■□□□ 1.71
UBC-201ENST00000339647 ABCC2Q92887 1545 aa25.74■■□□□ 1.71
UBC-201ENST00000339647 ERCC6L2Q5T890 1561 aa25.74■■□□□ 1.71
UBC-201ENST00000339647 TNNQ9UQP3 1299 aa25.73■■□□□ 1.71
UBC-201ENST00000339647 CLCN1P35523 988 aa25.73■■□□□ 1.71
UBC-201ENST00000339647 PDZRN3Q9UPQ7 1066 aa25.73■■□□□ 1.71
UBC-201ENST00000339647 ABCA8O94911 1581 aa25.72■■□□□ 1.71
UBC-201ENST00000339647 RNF17Q9BXT8 1623 aaKnown RBP25.71■■□□□ 1.71
UBC-201ENST00000339647 SAMD9LQ8IVG5 1584 aa25.71■■□□□ 1.71
UBC-201ENST00000339647 PKNOX2Q96KN3 472 aa25.7■■□□□ 1.7
UBC-201ENST00000339647 RLBP1P12271 317 aa25.69■■□□□ 1.7
UBC-201ENST00000339647 WWC1Q8IX03 1113 aa25.69■■□□□ 1.7
UBC-201ENST00000339647 PMFBP1Q8TBY8 1022 aa25.69■■□□□ 1.7
UBC-201ENST00000339647 SYNMO15061 1565 aa25.69■■□□□ 1.7
UBC-201ENST00000339647 CDCA8Q53HL2 280 aa25.69■■□□□ 1.7
UBC-201ENST00000339647 UNC13BO14795 1591 aa25.68■■□□□ 1.7
UBC-201ENST00000339647 NINLQ9Y2I6 1382 aa25.68■■□□□ 1.7
UBC-201ENST00000339647 TRAK2O60296 914 aa25.67■■□□□ 1.7
UBC-201ENST00000339647 GLIPR1L2Q4G1C9 344 aa25.67■■□□□ 1.7
UBC-201ENST00000339647 NEUROD2Q15784 382 aa25.66■■□□□ 1.7
UBC-201ENST00000339647 BCL2L13Q9BXK5 485 aa25.65■■□□□ 1.7
UBC-201ENST00000339647 NPC1L1Q9UHC9 1359 aa25.64■■□□□ 1.7
UBC-201ENST00000339647 RARSP54136 660 aaKnown RBP25.64■■□□□ 1.7
UBC-201ENST00000339647 VSIG10Q8N0Z9 540 aa25.64■■□□□ 1.7
UBC-201ENST00000339647 HSP90AA1P07900 732 aaKnown RBP25.64■■□□□ 1.69
UBC-201ENST00000339647 RSPH4AQ5TD94 716 aa25.64■■□□□ 1.69
UBC-201ENST00000339647 HSP90AA2PQ14568 343 aaPredicted RBP25.63■■□□□ 1.69
UBC-201ENST00000339647 CHMP5Q9NZZ3 219 aa25.62■■□□□ 1.69
UBC-201ENST00000339647 RRP7AQ9Y3A4 280 aaKnown RBP25.62■■□□□ 1.69
UBC-201ENST00000339647 IQGAP1P46940 1657 aa25.62■■□□□ 1.69
UBC-201ENST00000339647 CDC42BPBQ9Y5S2 1711 aa25.62■■□□□ 1.69
UBC-201ENST00000339647 IQGAP3Q86VI3 1631 aa25.61■■□□□ 1.69
UBC-201ENST00000339647 MYOM1P52179 1685 aa25.61■■□□□ 1.69
UBC-201ENST00000339647 MRE11P49959 708 aa25.6■■□□□ 1.69
UBC-201ENST00000339647 PLXNC1O60486 1568 aa25.6■■□□□ 1.69
UBC-201ENST00000339647 SYCP2Q9BX26 1530 aa25.6■■□□□ 1.69
UBC-201ENST00000339647 NGEFQ8N5V2 710 aa25.6■■□□□ 1.69
UBC-201ENST00000339647 ATP10AO60312 1499 aa25.59■■□□□ 1.69
UBC-201ENST00000339647 MFAP1P55081 439 aaKnown RBP25.59■■□□□ 1.69
UBC-201ENST00000339647 C22orf23Q9BZE7 217 aa25.59■■□□□ 1.69
UBC-201ENST00000339647 CARD14Q9BXL6 1004 aa25.59■■□□□ 1.69
UBC-201ENST00000339647 SCAF11Q99590 1463 aaKnown RBP25.58■■□□□ 1.69
UBC-201ENST00000339647 ZMYND15Q9H091 742 aa25.58■■□□□ 1.69
UBC-201ENST00000339647 RWDD1Q9H446 243 aaPredicted RBP25.58■■□□□ 1.68
UBC-201ENST00000339647 MADDQ8WXG6 1647 aa25.58■■□□□ 1.68
UBC-201ENST00000339647 GRPEL1Q9HAV7 217 aa25.57■■□□□ 1.68
UBC-201ENST00000339647 ERBB4Q15303 1308 aa25.57■■□□□ 1.68
UBC-201ENST00000339647 ZMYM3Q14202 1370 aa25.56■■□□□ 1.68
UBC-201ENST00000339647 RRP9O43818 475 aaKnown RBP25.56■■□□□ 1.68
UBC-201ENST00000339647 MYH16Q9H6N6 1097 aa25.56■■□□□ 1.68
UBC-201ENST00000339647 RTEL1-TNFRSF6BF6WH68 1400 aa25.55■■□□□ 1.68
UBC-201ENST00000339647 PREX2Q70Z35 1606 aa25.54■■□□□ 1.68
UBC-201ENST00000339647 ESPNB1AK53 854 aa25.53■■□□□ 1.68
UBC-201ENST00000339647 AAMPQ13685 434 aa25.53■■□□□ 1.68
UBC-201ENST00000339647 ZNF692Q9BU19 519 aaPredicted RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms