RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 STAG3Q9UJ98 1225 aa27.38■■□□□ 1.97
HLA-F-217ENST00000334668 MPHOSPH9Q99550 1183 aa27.36■■□□□ 1.97
HLA-F-217ENST00000334668 SCAF11Q99590 1463 aaKnown RBP27.34■■□□□ 1.97
HLA-F-217ENST00000334668 LTKP29376 864 aa27.34■■□□□ 1.97
HLA-F-217ENST00000334668 NPHP4O75161 1426 aaPredicted RBP27.33■■□□□ 1.96
HLA-F-217ENST00000334668 CLTCL1P53675 1640 aa27.32■■□□□ 1.96
HLA-F-217ENST00000334668 IQGAP1P46940 1657 aa27.31■■□□□ 1.96
HLA-F-217ENST00000334668 TXNDC2Q86VQ3 553 aa27.3■■□□□ 1.96
HLA-F-217ENST00000334668 ZFYVE9O95405 1425 aa27.3■■□□□ 1.96
HLA-F-217ENST00000334668 EID1Q9Y6B2 187 aa27.29■■□□□ 1.96
HLA-F-217ENST00000334668 KIF1BO60333 1816 aa27.27■■□□□ 1.96
HLA-F-217ENST00000334668 RIMS2Q9UQ26 1411 aa27.24■■□□□ 1.95
HLA-F-217ENST00000334668 LTBP4Q8N2S1 1624 aa27.24■■□□□ 1.95
HLA-F-217ENST00000334668 CHGAP10645 457 aaKnown RBP27.24■■□□□ 1.95
HLA-F-217ENST00000334668 NPM3O75607 178 aaKnown RBP27.21■■□□□ 1.95
HLA-F-217ENST00000334668 HDGFP51858 240 aaKnown RBP27.2■■□□□ 1.94
HLA-F-217ENST00000334668 ZNF335Q9H4Z2 1342 aaPredicted RBP27.19■■□□□ 1.94
HLA-F-217ENST00000334668 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
HLA-F-217ENST00000334668 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.18■■□□□ 1.94
HLA-F-217ENST00000334668 PLEKHG1Q9ULL1 1385 aa27.17■■□□□ 1.94
HLA-F-217ENST00000334668 CCDC144AA2RUR9 1427 aa27.16■■□□□ 1.94
HLA-F-217ENST00000334668 CERKQ8TCT0 537 aa27.14■■□□□ 1.94
HLA-F-217ENST00000334668 NEXMIFQ5QGS0 1516 aa27.13■■□□□ 1.93
HLA-F-217ENST00000334668 ANKRD30BQ9BXX2 1392 aa27.11■■□□□ 1.93
HLA-F-217ENST00000334668 STRCP1A6NGW2 1772 aa27.11■■□□□ 1.93
HLA-F-217ENST00000334668 SPATA31E1Q6ZUB1 1445 aa27.1■■□□□ 1.93
HLA-F-217ENST00000334668 PPP1R15AO75807 674 aaPredicted RBP27.1■■□□□ 1.93
HLA-F-217ENST00000334668 ZNF326Q5BKZ1 582 aaKnown RBP27.1■■□□□ 1.93
HLA-F-217ENST00000334668 CPS1P31327 1500 aa27.08■■□□□ 1.93
HLA-F-217ENST00000334668 RPGRIP1LQ68CZ1 1315 aa27.08■■□□□ 1.93
HLA-F-217ENST00000334668 IQSEC2Q5JU85 1478 aa27.07■■□□□ 1.92
HLA-F-217ENST00000334668 NUTM2DQ5VT03 806 aaPredicted RBP27.07■■□□□ 1.92
HLA-F-217ENST00000334668 SLC26A8Q96RN1 970 aa27.06■■□□□ 1.92
HLA-F-217ENST00000334668 PPLO60437 1756 aa27.06■■□□□ 1.92
HLA-F-217ENST00000334668 ADAMTS13Q76LX8 1427 aa27.06■■□□□ 1.92
HLA-F-217ENST00000334668 TBX22Q9Y458 520 aa27.04■■□□□ 1.92
HLA-F-217ENST00000334668 DIP2AQ14689 1571 aa27.04■■□□□ 1.92
HLA-F-217ENST00000334668 SETBP1Q9Y6X0 1596 aa27.04■■□□□ 1.92
HLA-F-217ENST00000334668 NRXN3Q9Y4C0 1643 aa27.04■■□□□ 1.92
HLA-F-217ENST00000334668 CHD2O14647 1828 aaKnown RBP27.01■■□□□ 1.91
HLA-F-217ENST00000334668 IFT172Q9UG01 1749 aa27.01■■□□□ 1.91
HLA-F-217ENST00000334668 BCANQ96GW7 911 aa27■■□□□ 1.91
HLA-F-217ENST00000334668 VGFO15240 615 aaPredicted RBP26.99■■□□□ 1.91
HLA-F-217ENST00000334668 ILDR1Q86SU0 546 aaPredicted RBP26.99■■□□□ 1.91
HLA-F-217ENST00000334668 NWD1Q149M9 1564 aa26.99■■□□□ 1.91
HLA-F-217ENST00000334668 KCNA6P17658 529 aa26.98■■□□□ 1.91
HLA-F-217ENST00000334668 FBXO41Q8TF61 875 aa26.97■■□□□ 1.91
HLA-F-217ENST00000334668 PIK3R4Q99570 1358 aa26.97■■□□□ 1.91
HLA-F-217ENST00000334668 LRRC7Q96NW7 1537 aa26.96■■□□□ 1.91
HLA-F-217ENST00000334668 RGL3Q3MIN7 710 aa26.95■■□□□ 1.9
HLA-F-217ENST00000334668 KCNA4P22459 653 aa26.93■■□□□ 1.9
HLA-F-217ENST00000334668 CACNB1Q02641 598 aaPredicted RBP26.92■■□□□ 1.9
HLA-F-217ENST00000334668 RNF39Q9H2S5 420 aa26.92■■□□□ 1.9
HLA-F-217ENST00000334668 SETD1AO15047 1707 aaKnown RBP26.92■■□□□ 1.9
HLA-F-217ENST00000334668 XIRP1Q702N8 1843 aaKnown RBP26.92■■□□□ 1.9
HLA-F-217ENST00000334668 NKTRP30414 1462 aaKnown RBP26.92■■□□□ 1.9
HLA-F-217ENST00000334668 PTPRUQ92729 1446 aa26.88■■□□□ 1.89
HLA-F-217ENST00000334668 ADGRF5Q8IZF2 1346 aa26.88■■□□□ 1.89
HLA-F-217ENST00000334668 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
HLA-F-217ENST00000334668 DHX57Q6P158 1386 aaKnown RBP26.87■■□□□ 1.89
HLA-F-217ENST00000334668 METP08581 1390 aa26.86■■□□□ 1.89
HLA-F-217ENST00000334668 MYOM2P54296 1465 aa26.86■■□□□ 1.89
HLA-F-217ENST00000334668 NRXN1Q9ULB1 1477 aa26.86■■□□□ 1.89
HLA-F-217ENST00000334668 XRN1Q8IZH2 1706 aaKnown RBP26.85■■□□□ 1.89
HLA-F-217ENST00000334668 PIK3C2GO75747 1445 aa26.83■■□□□ 1.89
HLA-F-217ENST00000334668 TMEM94Q12767 1356 aa26.82■■□□□ 1.88
HLA-F-217ENST00000334668 PROSER2Q86WR7 435 aaPredicted RBP26.81■■□□□ 1.88
HLA-F-217ENST00000334668 AMOTL2Q9Y2J4 779 aa26.81■■□□□ 1.88
HLA-F-217ENST00000334668 STAC3Q96MF2 364 aa26.79■■□□□ 1.88
HLA-F-217ENST00000334668 NCOA3Q9Y6Q9 1424 aa26.78■■□□□ 1.88
HLA-F-217ENST00000334668 PRAG1Q86YV5 1406 aa26.77■■□□□ 1.88
HLA-F-217ENST00000334668 UBAP1LF5GYI3 381 aa26.76■■□□□ 1.87
HLA-F-217ENST00000334668 TOM1O60784 492 aa26.73■■□□□ 1.87
HLA-F-217ENST00000334668 DCAF11Q8TEB1 546 aa26.73■■□□□ 1.87
HLA-F-217ENST00000334668 PCGF6Q9BYE7 350 aa26.73■■□□□ 1.87
HLA-F-217ENST00000334668 C14orf93Q9H972 538 aaKnown RBP26.73■■□□□ 1.87
HLA-F-217ENST00000334668 LAMC1P11047 1609 aa26.72■■□□□ 1.87
HLA-F-217ENST00000334668 ASXL1Q8IXJ9 1541 aa26.72■■□□□ 1.87
HLA-F-217ENST00000334668 RBM33Q96EV2 1170 aaKnown RBP26.72■■□□□ 1.87
HLA-F-217ENST00000334668 PTCH1Q13635 1447 aa26.71■■□□□ 1.87
HLA-F-217ENST00000334668 SIN3AQ96ST3 1273 aa26.69■■□□□ 1.86
HLA-F-217ENST00000334668 KDM2AQ9Y2K7 1162 aa26.68■■□□□ 1.86
HLA-F-217ENST00000334668 TECPR2O15040 1411 aa26.66■■□□□ 1.86
HLA-F-217ENST00000334668 CFAP70Q5T0N1 1121 aa26.66■■□□□ 1.86
HLA-F-217ENST00000334668 LRPPRCP42704 1394 aaKnown RBP26.66■■□□□ 1.86
HLA-F-217ENST00000334668 MSH6P52701 1360 aa26.66■■□□□ 1.86
HLA-F-217ENST00000334668 KNDC1Q76NI1 1749 aa26.65■■□□□ 1.86
HLA-F-217ENST00000334668 ROBO2Q9HCK4 1378 aa26.65■■□□□ 1.86
HLA-F-217ENST00000334668 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.65■■□□□ 1.86
HLA-F-217ENST00000334668 ABCC11Q96J66 1382 aa26.64■■□□□ 1.86
HLA-F-217ENST00000334668 TMEM132EQ6IEE7 984 aa26.63■■□□□ 1.85
HLA-F-217ENST00000334668 C19orf44Q9H6X5 657 aa26.63■■□□□ 1.85
HLA-F-217ENST00000334668 YTHDC2Q9H6S0 1430 aaKnown RBP26.62■■□□□ 1.85
HLA-F-217ENST00000334668 ADGRB1O14514 1584 aa26.62■■□□□ 1.85
HLA-F-217ENST00000334668 L3MBTL2Q969R5 705 aa26.6■■□□□ 1.85
HLA-F-217ENST00000334668 DCCP43146 1447 aa26.59■■□□□ 1.85
HLA-F-217ENST00000334668 NEUROD1Q13562 356 aa26.59■■□□□ 1.85
HLA-F-217ENST00000334668 NALCNQ8IZF0 1738 aa26.59■■□□□ 1.85
HLA-F-217ENST00000334668 KIAA1210Q9ULL0 1709 aa26.59■■□□□ 1.85
HLA-F-217ENST00000334668 ADGRL3Q9HAR2 1447 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms