RNA–Protein interactions for RNA: ENST00000325674.11

CAST-202, Transcript of calpastatin, humanhuman

TSL 5 BASIC

Gene CAST, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-202ENST00000325674 PTMSP20962 102 aa8.88□□□□□ -0.99
CAST-202ENST00000325674 HMGN5P82970 282 aaKnown RBP8.88□□□□□ -0.99
CAST-202ENST00000325674 ZNF622Q969S3 477 aaKnown RBP eCLIP8.88□□□□□ -0.994e-8■■■□□ 14.8
CAST-202ENST00000325674 NPC1L1Q9UHC9 1359 aa8.88□□□□□ -0.99
CAST-202ENST00000325674 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
CAST-202ENST00000325674 CHMP5Q9NZZ3 219 aa8.88□□□□□ -0.99
CAST-202ENST00000325674 KIF21AQ7Z4S6 1674 aa8.87□□□□□ -0.99
CAST-202ENST00000325674 ZKSCAN5Q9Y2L8 839 aa8.87□□□□□ -0.99
CAST-202ENST00000325674 PRIMPOLQ96LW4 560 aa8.87□□□□□ -0.99
CAST-202ENST00000325674 EPRSP07814 1512 aaKnown RBP8.87□□□□□ -0.99
CAST-202ENST00000325674 ZBTB22O15209 634 aa8.87□□□□□ -0.99
CAST-202ENST00000325674 CAPN2P17655 700 aa8.87□□□□□ -0.99
CAST-202ENST00000325674 ANKRD7Q92527 254 aa8.87□□□□□ -0.99
CAST-202ENST00000325674 FMN1Q68DA7 1419 aa8.87□□□□□ -0.99
CAST-202ENST00000325674 SKOR2Q2VWA4 1001 aaPredicted RBP8.86□□□□□ -0.99
CAST-202ENST00000325674 TMC1Q8TDI8 760 aa8.86□□□□□ -0.99
CAST-202ENST00000325674 TSPYL1Q9H0U9 437 aa8.86□□□□□ -0.99
CAST-202ENST00000325674 FGD6Q6ZV73 1430 aa8.86□□□□□ -0.99
CAST-202ENST00000325674 ZNF445P59923 1031 aa8.86□□□□□ -0.99
CAST-202ENST00000325674 EFCC1Q9HA90 598 aa8.86□□□□□ -0.99
CAST-202ENST00000325674 ARHGEF11O15085 1522 aa8.85□□□□□ -0.99
CAST-202ENST00000325674 MSNP26038 577 aaKnown RBP8.85□□□□□ -0.99
CAST-202ENST00000325674 FYCO1Q9BQS8 1478 aa8.85□□□□□ -0.99
CAST-202ENST00000325674 FEZ1Q99689 392 aa8.85□□□□□ -0.99
CAST-202ENST00000325674 ARID3AQ99856 593 aa8.85□□□□□ -0.99
CAST-202ENST00000325674 SLFN14P0C7P3 912 aa8.84□□□□□ -0.99
CAST-202ENST00000325674 DNTTIP2Q5QJE6 756 aaKnown RBP8.84□□□□□ -0.99
CAST-202ENST00000325674 PANK3Q9H999 370 aa8.84□□□□□ -0.99
CAST-202ENST00000325674 SEC24BO95487 1268 aa8.84□□□□□ -0.99
CAST-202ENST00000325674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.84□□□□□ -0.99
CAST-202ENST00000325674 FAM53CQ9NYF3 392 aa8.84□□□□□ -0.99
CAST-202ENST00000325674 CIZ1Q9ULV3 898 aaPredicted RBP8.84□□□□□ -0.99
CAST-202ENST00000325674 PARD3Q8TEW0 1356 aa8.83□□□□□ -1
CAST-202ENST00000325674 CREBRFQ8IUR6 639 aa8.83□□□□□ -1
CAST-202ENST00000325674 TCOF1Q13428 1488 aaKnown RBP8.83□□□□□ -1
CAST-202ENST00000325674 MAPK8IP3Q9UPT6 1336 aa8.83□□□□□ -1
CAST-202ENST00000325674 POLA1P09884 1462 aaPredicted RBP8.83□□□□□ -1
CAST-202ENST00000325674 CEP120Q8N960 986 aa8.82□□□□□ -1
CAST-202ENST00000325674 CGNQ9P2M7 1197 aaKnown RBP8.82□□□□□ -1
CAST-202ENST00000325674 HDAC5Q9UQL6 1122 aa8.82□□□□□ -1
CAST-202ENST00000325674 KIF15Q9NS87 1388 aa8.82□□□□□ -1
CAST-202ENST00000325674 NASPP49321 788 aaPredicted RBP8.82□□□□□ -1
CAST-202ENST00000325674 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
CAST-202ENST00000325674 SLKQ9H2G2 1235 aaPredicted RBP8.82□□□□□ -1
CAST-202ENST00000325674 SAMD9Q5K651 1589 aa8.82□□□□□ -1
CAST-202ENST00000325674 MYBBP1AQ9BQG0 1328 aaKnown RBP8.82□□□□□ -1
CAST-202ENST00000325674 KDM6BO15054 1643 aa8.82□□□□□ -1
CAST-202ENST00000325674 CTIFO43310 598 aaKnown RBP8.81□□□□□ -1
CAST-202ENST00000325674 SYCP1Q15431 976 aa8.81□□□□□ -1
CAST-202ENST00000325674 LRRIQ1Q96JM4 1722 aa8.81□□□□□ -1
CAST-202ENST00000325674 CBX1P83916 185 aa8.81□□□□□ -1
CAST-202ENST00000325674 RAB3GAP1Q15042 981 aa8.81□□□□□ -1
CAST-202ENST00000325674 RALBP1Q15311 655 aa8.81□□□□□ -1
CAST-202ENST00000325674 CNPY4Q8N129 248 aa8.81□□□□□ -1
CAST-202ENST00000325674 ABCC2Q92887 1545 aa8.81□□□□□ -1
CAST-202ENST00000325674 CDK11BP21127 795 aaKnown RBP8.8□□□□□ -1
CAST-202ENST00000325674 SMC5Q8IY18 1101 aa8.8□□□□□ -1
CAST-202ENST00000325674 GZF1Q9H116 711 aaPredicted RBP8.8□□□□□ -1
CAST-202ENST00000325674 C20orf194Q5TEA3 1177 aa8.8□□□□□ -1
CAST-202ENST00000325674 SPTLC3Q9NUV7 552 aa8.8□□□□□ -1
CAST-202ENST00000325674 OGFRQ9NZT2 677 aa8.8□□□□□ -1
CAST-202ENST00000325674 ZNF521Q96K83 1311 aa8.8□□□□□ -1
CAST-202ENST00000325674 XPCQ01831 940 aaPredicted RBP8.79□□□□□ -1
CAST-202ENST00000325674 UHRF1BP1Q6BDS2 1440 aa8.79□□□□□ -1
CAST-202ENST00000325674 CCDC66A2RUB6 948 aa8.79□□□□□ -1
CAST-202ENST00000325674 TIGD1Q96MW7 591 aa8.79□□□□□ -1
CAST-202ENST00000325674 KLHL40Q2TBA0 621 aa8.79□□□□□ -1
CAST-202ENST00000325674 NGEFQ8N5V2 710 aa8.79□□□□□ -1
CAST-202ENST00000325674 SNX21Q969T3 373 aa8.79□□□□□ -1
CAST-202ENST00000325674 KIF3AQ9Y496 699 aa8.79□□□□□ -1
CAST-202ENST00000325674 NOP2P46087 812 aaKnown RBP8.78□□□□□ -1
CAST-202ENST00000325674 MFAP1P55081 439 aaKnown RBP8.78□□□□□ -1
CAST-202ENST00000325674 SPINK5Q9NQ38 1064 aaPredicted RBP8.78□□□□□ -1
CAST-202ENST00000325674 FBXO3Q9UK99 471 aa8.78□□□□□ -1
CAST-202ENST00000325674 CC2D2AQ9P2K1 1620 aa8.77□□□□□ -1
CAST-202ENST00000325674 SIRT1Q96EB6 747 aa8.77□□□□□ -1.01
CAST-202ENST00000325674 MTUS2Q5JR59 1369 aa8.77□□□□□ -1.01
CAST-202ENST00000325674 ANKRD30BQ9BXX2 1392 aa8.77□□□□□ -1.01
CAST-202ENST00000325674 CFTRP13569 1480 aa8.77□□□□□ -1.01
CAST-202ENST00000325674 RALGAPBQ86X10 1494 aa8.77□□□□□ -1.01
CAST-202ENST00000325674 KCNJ4P48050 445 aa8.77□□□□□ -1.01
CAST-202ENST00000325674 FEZ2Q9UHY8 353 aaPredicted RBP8.77□□□□□ -1.01
CAST-202ENST00000325674 MORC2Q9Y6X9 1032 aaPredicted RBP8.77□□□□□ -1.01
CAST-202ENST00000325674 EFCAB5A4FU69 1503 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 PHF14O94880 888 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 CAMSAP2Q08AD1 1489 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 CASKIN1Q8WXD9 1431 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 MYCNP04198 464 aaPredicted RBP8.76□□□□□ -1.01
CAST-202ENST00000325674 TRMT2AQ8IZ69 625 aaKnown RBP8.76□□□□□ -1.01
CAST-202ENST00000325674 CCDC39Q9UFE4 941 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 TERF2Q15554 542 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 NBPF8Q3BBV2 869 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 TNPO1Q92973 898 aaKnown RBP8.76□□□□□ -1.01
CAST-202ENST00000325674 BCL2L12Q9HB09 334 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 LAMC1P11047 1609 aa8.76□□□□□ -1.01
CAST-202ENST00000325674 PLIN1O60240 522 aa8.75□□□□□ -1.01
CAST-202ENST00000325674 CALCOCO1Q9P1Z2 691 aa8.75□□□□□ -1.01
CAST-202ENST00000325674 BRPF1P55201 1214 aaPredicted RBP8.75□□□□□ -1.01
CAST-202ENST00000325674 FKBP5Q13451 457 aaPredicted RBP8.75□□□□□ -1.01
CAST-202ENST00000325674 MCCP23508 829 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms