RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 TBC1D2Q9BYX2 928 aa12.39□□□□□ -0.43
RPGR-201ENST00000318842 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
RPGR-201ENST00000318842 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
RPGR-201ENST00000318842 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
RPGR-201ENST00000318842 NAP1L5Q96NT1 182 aaPredicted RBP12.37□□□□□ -0.43
RPGR-201ENST00000318842 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
RPGR-201ENST00000318842 ATP10BO94823 1461 aa12.37□□□□□ -0.43
RPGR-201ENST00000318842 ADGRL2O95490 1459 aa12.37□□□□□ -0.43
RPGR-201ENST00000318842 CDC42BPAQ5VT25 1732 aa12.37□□□□□ -0.43
RPGR-201ENST00000318842 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
RPGR-201ENST00000318842 GRIN2AQ12879 1464 aa12.36□□□□□ -0.43
RPGR-201ENST00000318842 ADGBQ8N7X0 1667 aa12.36□□□□□ -0.43
RPGR-201ENST00000318842 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
RPGR-201ENST00000318842 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.36□□□□□ -0.43
RPGR-201ENST00000318842 TRPM1Q7Z4N2 1603 aa12.36□□□□□ -0.43
RPGR-201ENST00000318842 WDR7Q9Y4E6 1490 aa12.35□□□□□ -0.43
RPGR-201ENST00000318842 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.43
RPGR-201ENST00000318842 WWC1Q8IX03 1113 aa12.35□□□□□ -0.43
RPGR-201ENST00000318842 MAGI1Q96QZ7 1491 aaPredicted RBP12.34□□□□□ -0.43
RPGR-201ENST00000318842 AFAP1Q8N556 730 aa12.34□□□□□ -0.43
RPGR-201ENST00000318842 ARHGEF12Q9NZN5 1544 aa12.34□□□□□ -0.43
RPGR-201ENST00000318842 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
RPGR-201ENST00000318842 SLC12A5Q9H2X9 1139 aa12.33□□□□□ -0.44
RPGR-201ENST00000318842 CROCC2H7BZ55 1655 aa12.33□□□□□ -0.44
RPGR-201ENST00000318842 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.44
RPGR-201ENST00000318842 TMEM132EQ6IEE7 984 aa12.33□□□□□ -0.44
RPGR-201ENST00000318842 ARID3AQ99856 593 aa12.33□□□□□ -0.44
RPGR-201ENST00000318842 ANTXR1Q9H6X2 564 aa12.32□□□□□ -0.44
RPGR-201ENST00000318842 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
RPGR-201ENST00000318842 SYCP2Q9BX26 1530 aa12.32□□□□□ -0.44
RPGR-201ENST00000318842 FBLN1P23142 703 aa12.31□□□□□ -0.44
RPGR-201ENST00000318842 TCP11L2Q8N4U5 519 aa12.31□□□□□ -0.44
RPGR-201ENST00000318842 FAM43AQ8N2R8 423 aa12.31□□□□□ -0.44
RPGR-201ENST00000318842 NKTRP30414 1462 aaKnown RBP12.3□□□□□ -0.44
RPGR-201ENST00000318842 ABCC10Q5T3U5 1492 aa12.3□□□□□ -0.44
RPGR-201ENST00000318842 ADGRF5Q8IZF2 1346 aa12.3□□□□□ -0.44
RPGR-201ENST00000318842 RARSP54136 660 aaKnown RBP12.3□□□□□ -0.44
RPGR-201ENST00000318842 TRMT2AQ8IZ69 625 aaKnown RBP12.29□□□□□ -0.44
RPGR-201ENST00000318842 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
RPGR-201ENST00000318842 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
RPGR-201ENST00000318842 E9PSI1 815 aa12.29□□□□□ -0.44
RPGR-201ENST00000318842 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
RPGR-201ENST00000318842 C1orf115Q9H7X2 142 aa12.28□□□□□ -0.44
RPGR-201ENST00000318842 PTPRGP23470 1445 aa12.28□□□□□ -0.44
RPGR-201ENST00000318842 CHAMP1Q96JM3 812 aa12.28□□□□□ -0.44
RPGR-201ENST00000318842 RBM42Q9BTD8 480 aaKnown RBP12.28□□□□□ -0.44
RPGR-201ENST00000318842 NLRP1Q9C000 1473 aa12.28□□□□□ -0.44
RPGR-201ENST00000318842 TBC1D32Q96NH3 1257 aa12.27□□□□□ -0.44
RPGR-201ENST00000318842 SAMD9LQ8IVG5 1584 aa12.27□□□□□ -0.45
RPGR-201ENST00000318842 GPRASP1Q5JY77 1395 aa12.27□□□□□ -0.45
RPGR-201ENST00000318842 BECN1Q14457 450 aa12.27□□□□□ -0.45
RPGR-201ENST00000318842 VSIG10Q8N0Z9 540 aa12.27□□□□□ -0.45
RPGR-201ENST00000318842 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.45
RPGR-201ENST00000318842 MTHFSP49914 203 aa12.26□□□□□ -0.45
RPGR-201ENST00000318842 MORC1Q86VD1 984 aa12.26□□□□□ -0.45
RPGR-201ENST00000318842 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
RPGR-201ENST00000318842 EIF3AQ14152 1382 aaKnown RBP12.26□□□□□ -0.45
RPGR-201ENST00000318842 GOLGA6L3A6NEY3 463 aa12.26□□□□□ -0.45
RPGR-201ENST00000318842 ITPRIPQ8IWB1 547 aa12.26□□□□□ -0.45
RPGR-201ENST00000318842 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
RPGR-201ENST00000318842 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
RPGR-201ENST00000318842 U2SURPO15042 1029 aaKnown RBP12.26□□□□□ -0.45
RPGR-201ENST00000318842 CD2BP2O95400 341 aaKnown RBP12.26□□□□□ -0.45
RPGR-201ENST00000318842 U2AF1L5P0DN76 240 aaPredicted RBP12.26□□□□□ -0.45
RPGR-201ENST00000318842 U2AF1Q01081 240 aaKnown RBP eCLIP12.26□□□□□ -0.45
RPGR-201ENST00000318842 LNPKQ9C0E8 428 aa12.26□□□□□ -0.45
RPGR-201ENST00000318842 ARHGAP5Q13017 1502 aa12.26□□□□□ -0.45
RPGR-201ENST00000318842 MCM4P33991 863 aa12.25□□□□□ -0.45
RPGR-201ENST00000318842 GAS2L3Q86XJ1 694 aa12.25□□□□□ -0.45
RPGR-201ENST00000318842 CCDC141Q6ZP82 1450 aa12.25□□□□□ -0.45
RPGR-201ENST00000318842 ELL2O00472 640 aaPredicted RBP12.25□□□□□ -0.45
RPGR-201ENST00000318842 TRAK2O60296 914 aa12.25□□□□□ -0.45
RPGR-201ENST00000318842 PLEKHG5O94827 1062 aa12.24□□□□□ -0.45
RPGR-201ENST00000318842 FTSJ3Q8IY81 847 aaKnown RBP12.24□□□□□ -0.45
RPGR-201ENST00000318842 MYO5CQ9NQX4 1742 aa12.24□□□□□ -0.45
RPGR-201ENST00000318842 INSRP06213 1382 aa12.24□□□□□ -0.45
RPGR-201ENST00000318842 CARMIL2Q6F5E8 1435 aa12.24□□□□□ -0.45
RPGR-201ENST00000318842 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
RPGR-201ENST00000318842 TPRNQ4KMQ1 711 aa12.24□□□□□ -0.45
RPGR-201ENST00000318842 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
RPGR-201ENST00000318842 CGNL1Q0VF96 1302 aa12.23□□□□□ -0.45
RPGR-201ENST00000318842 RSPH6AQ9H0K4 717 aa12.23□□□□□ -0.45
RPGR-201ENST00000318842 KIF3BO15066 747 aa12.22□□□□□ -0.45
RPGR-201ENST00000318842 EXOSC9Q06265 439 aaKnown RBP12.22□□□□□ -0.45
RPGR-201ENST00000318842 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
RPGR-201ENST00000318842 PNNQ9H307 717 aaKnown RBP12.22□□□□□ -0.45
RPGR-201ENST00000318842 SMC4Q9NTJ3 1288 aa12.22□□□□□ -0.45
RPGR-201ENST00000318842 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
RPGR-201ENST00000318842 APBB1O00213 710 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
RPGR-201ENST00000318842 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
RPGR-201ENST00000318842 STK26Q9P289 416 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 MAPK8IP3Q9UPT6 1336 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 ABCA8O94911 1581 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 TRIM27P14373 513 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 PDE3AQ14432 1141 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 GGNBP2Q9H3C7 697 aa12.2□□□□□ -0.46
RPGR-201ENST00000318842 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms