RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 FSD2A1L4K1 749 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 CANXP27824 592 aaKnown RBP24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 TBC1D2Q9BYX2 928 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 PTPRGP23470 1445 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 SPRYD3Q8NCJ5 442 aa24.13■■□□□ 1.45
CHRNB1-201ENST00000306071 CLUAP1Q96AJ1 413 aa24.13■■□□□ 1.45
CHRNB1-201ENST00000306071 RRP9O43818 475 aaKnown RBP24.12■■□□□ 1.45
CHRNB1-201ENST00000306071 SHANK2Q9UPX8 1470 aa24.12■■□□□ 1.45
CHRNB1-201ENST00000306071 APAF1O14727 1248 aa24.11■■□□□ 1.45
CHRNB1-201ENST00000306071 MCM4P33991 863 aa24.11■■□□□ 1.45
CHRNB1-201ENST00000306071 CLASP1Q7Z460 1538 aa24.11■■□□□ 1.45
CHRNB1-201ENST00000306071 COG6Q9Y2V7 657 aa24.1■■□□□ 1.45
CHRNB1-201ENST00000306071 TBC1D32Q96NH3 1257 aa24.1■■□□□ 1.45
CHRNB1-201ENST00000306071 CDC42BPAQ5VT25 1732 aa24.1■■□□□ 1.45
CHRNB1-201ENST00000306071 ADCY10Q96PN6 1610 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 E9PSI1 815 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 PDE3AQ14432 1141 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 PANK1Q8TE04 598 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 LAMC1P11047 1609 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 A2MP01023 1474 aa24.08■■□□□ 1.45
CHRNB1-201ENST00000306071 FAM135AQ9P2D6 1515 aa24.08■■□□□ 1.44
CHRNB1-201ENST00000306071 MAGI2Q86UL8 1455 aa24.07■■□□□ 1.44
CHRNB1-201ENST00000306071 AMER1Q5JTC6 1135 aaPredicted RBP24.05■■□□□ 1.44
CHRNB1-201ENST00000306071 TRAK2O60296 914 aa24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 MRE11P49959 708 aa24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 PLB1Q6P1J6 1458 aa24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 CENPJQ9HC77 1338 aaPredicted RBP24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 WDR7Q9Y4E6 1490 aa24.03■■□□□ 1.44
CHRNB1-201ENST00000306071 PMFBP1Q8TBY8 1022 aa24.01■■□□□ 1.43
CHRNB1-201ENST00000306071 MYH16Q9H6N6 1097 aa24.01■■□□□ 1.43
CHRNB1-201ENST00000306071 NINLQ9Y2I6 1382 aa24.01■■□□□ 1.43
CHRNB1-201ENST00000306071 DMRT2Q9Y5R5 561 aa24■■□□□ 1.43
CHRNB1-201ENST00000306071 EIF2AK4Q9P2K8 1649 aaKnown RBP24■■□□□ 1.43
CHRNB1-201ENST00000306071 CHMP5Q9NZZ3 219 aa24■■□□□ 1.43
CHRNB1-201ENST00000306071 PIK3C2GO75747 1445 aa24■■□□□ 1.43
CHRNB1-201ENST00000306071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 PLEKHD1A6NEE1 506 aa23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 ESPNB1AK53 854 aa23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 GRPEL1Q9HAV7 217 aa23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 PDZRN3Q9UPQ7 1066 aa23.97■■□□□ 1.43
CHRNB1-201ENST00000306071 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
CHRNB1-201ENST00000306071 ABCC2Q92887 1545 aa23.96■■□□□ 1.43
CHRNB1-201ENST00000306071 PLA2R1Q13018 1463 aa23.96■■□□□ 1.43
CHRNB1-201ENST00000306071 ASXL1Q8IXJ9 1541 aa23.95■■□□□ 1.42
CHRNB1-201ENST00000306071 CCDC141Q6ZP82 1450 aa23.95■■□□□ 1.42
CHRNB1-201ENST00000306071 PCDHB15Q9Y5E8 787 aa23.94■■□□□ 1.42
CHRNB1-201ENST00000306071 TRIM44Q96DX7 344 aaPredicted RBP23.94■■□□□ 1.42
CHRNB1-201ENST00000306071 CDCA8Q53HL2 280 aa23.93■■□□□ 1.42
CHRNB1-201ENST00000306071 NUP160Q12769 1436 aa23.93■■□□□ 1.42
CHRNB1-201ENST00000306071 ZMYM3Q14202 1370 aa23.92■■□□□ 1.42
CHRNB1-201ENST00000306071 DDX11L8A8MPP1 907 aa23.92■■□□□ 1.42
CHRNB1-201ENST00000306071 ERBB4Q15303 1308 aa23.91■■□□□ 1.42
CHRNB1-201ENST00000306071 C22orf23Q9BZE7 217 aa23.91■■□□□ 1.42
CHRNB1-201ENST00000306071 NGEFQ8N5V2 710 aa23.9■■□□□ 1.42
CHRNB1-201ENST00000306071 RWDD1Q9H446 243 aaPredicted RBP23.9■■□□□ 1.42
CHRNB1-201ENST00000306071 MFAP1P55081 439 aaKnown RBP23.89■■□□□ 1.42
CHRNB1-201ENST00000306071 AAMPQ13685 434 aa23.89■■□□□ 1.42
CHRNB1-201ENST00000306071 SYNJ2O15056 1496 aa23.89■■□□□ 1.41
CHRNB1-201ENST00000306071 SYNMO15061 1565 aa23.88■■□□□ 1.41
CHRNB1-201ENST00000306071 WWC1Q8IX03 1113 aa23.88■■□□□ 1.41
CHRNB1-201ENST00000306071 ISY1Q9ULR0 285 aaKnown RBP23.88■■□□□ 1.41
CHRNB1-201ENST00000306071 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
CHRNB1-201ENST00000306071 PLXNC1O60486 1568 aa23.87■■□□□ 1.41
CHRNB1-201ENST00000306071 ARHGEF5Q12774 1597 aa23.87■■□□□ 1.41
CHRNB1-201ENST00000306071 RLBP1P12271 317 aa23.86■■□□□ 1.41
CHRNB1-201ENST00000306071 HSCBQ8IWL3 235 aa23.86■■□□□ 1.41
CHRNB1-201ENST00000306071 RARSP54136 660 aaKnown RBP23.85■■□□□ 1.41
CHRNB1-201ENST00000306071 TNNQ9UQP3 1299 aa23.85■■□□□ 1.41
CHRNB1-201ENST00000306071 RNF17Q9BXT8 1623 aaKnown RBP23.85■■□□□ 1.41
CHRNB1-201ENST00000306071 NEUROD2Q15784 382 aa23.85■■□□□ 1.41
CHRNB1-201ENST00000306071 NPC1L1Q9UHC9 1359 aa23.84■■□□□ 1.41
CHRNB1-201ENST00000306071 TPM2P07951 284 aa23.83■■□□□ 1.41
CHRNB1-201ENST00000306071 BCL2L13Q9BXK5 485 aa23.83■■□□□ 1.41
CHRNB1-201ENST00000306071 GRIN2AQ12879 1464 aa23.83■■□□□ 1.4
CHRNB1-201ENST00000306071 RTEL1-TNFRSF6BF6WH68 1400 aa23.79■■□□□ 1.4
CHRNB1-201ENST00000306071 RRP7AQ9Y3A4 280 aaKnown RBP23.78■■□□□ 1.4
CHRNB1-201ENST00000306071 UNC13BO14795 1591 aa23.78■■□□□ 1.4
CHRNB1-201ENST00000306071 GAS2L3Q86XJ1 694 aa23.78■■□□□ 1.4
CHRNB1-201ENST00000306071 ZNF692Q9BU19 519 aaPredicted RBP23.78■■□□□ 1.4
CHRNB1-201ENST00000306071 PDCL3Q9H2J4 239 aa23.77■■□□□ 1.4
CHRNB1-201ENST00000306071 IQGAP1P46940 1657 aa23.77■■□□□ 1.4
CHRNB1-201ENST00000306071 CARMIL2Q6F5E8 1435 aa23.76■■□□□ 1.39
CHRNB1-201ENST00000306071 RSPH4AQ5TD94 716 aa23.76■■□□□ 1.39
CHRNB1-201ENST00000306071 TNPO1Q92973 898 aaKnown RBP23.75■■□□□ 1.39
CHRNB1-201ENST00000306071 MYOM1P52179 1685 aa23.75■■□□□ 1.39
CHRNB1-201ENST00000306071 KIAA1211Q6ZU35 1233 aa23.74■■□□□ 1.39
CHRNB1-201ENST00000306071 GBP4Q96PP9 640 aa23.74■■□□□ 1.39
CHRNB1-201ENST00000306071 ATP10BO94823 1461 aa23.74■■□□□ 1.39
CHRNB1-201ENST00000306071 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
CHRNB1-201ENST00000306071 SAMD9LQ8IVG5 1584 aa23.73■■□□□ 1.39
CHRNB1-201ENST00000306071 IQGAP3Q86VI3 1631 aa23.72■■□□□ 1.39
CHRNB1-201ENST00000306071 ABCA8O94911 1581 aa23.72■■□□□ 1.39
CHRNB1-201ENST00000306071 MVPQ14764 893 aaKnown RBP23.72■■□□□ 1.39
CHRNB1-201ENST00000306071 SKOR2Q2VWA4 1001 aaPredicted RBP23.72■■□□□ 1.39
CHRNB1-201ENST00000306071 FTSJ3Q8IY81 847 aaKnown RBP23.71■■□□□ 1.39
CHRNB1-201ENST00000306071 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.38
CHRNB1-201ENST00000306071 DDIT3P35638 169 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms