RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
CAPN13-201ENST00000295055 E9PCH4 1651 aa16.37■□□□□ 0.21
CAPN13-201ENST00000295055 CEP152O94986 1710 aa16.37■□□□□ 0.21
CAPN13-201ENST00000295055 PLA2R1Q13018 1463 aa16.36■□□□□ 0.21
CAPN13-201ENST00000295055 EFCAB6Q5THR3 1501 aa16.36■□□□□ 0.21
CAPN13-201ENST00000295055 ARID4BQ4LE39 1312 aaPredicted RBP16.36■□□□□ 0.21
CAPN13-201ENST00000295055 RPRD2Q5VT52 1461 aaKnown RBP16.35■□□□□ 0.21
CAPN13-201ENST00000295055 ZC3H13Q5T200 1668 aaKnown RBP16.34■□□□□ 0.21
CAPN13-201ENST00000295055 MLECQ14165 292 aa16.34■□□□□ 0.21
CAPN13-201ENST00000295055 PTPRTO14522 1441 aa16.34■□□□□ 0.21
CAPN13-201ENST00000295055 NPATQ14207 1427 aa16.33■□□□□ 0.2
CAPN13-201ENST00000295055 ARHGAP31Q2M1Z3 1444 aa16.32■□□□□ 0.2
CAPN13-201ENST00000295055 CAMSAP1Q5T5Y3 1602 aa16.32■□□□□ 0.2
CAPN13-201ENST00000295055 WASHC2AQ641Q2 1341 aa16.32■□□□□ 0.2
CAPN13-201ENST00000295055 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
CAPN13-201ENST00000295055 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
CAPN13-201ENST00000295055 CCDC144AA2RUR9 1427 aa16.31■□□□□ 0.2
CAPN13-201ENST00000295055 HSP90AA2PQ14568 343 aaPredicted RBP16.3■□□□□ 0.2
CAPN13-201ENST00000295055 TRPM2O94759 1503 aa16.29■□□□□ 0.2
CAPN13-201ENST00000295055 SPHKAPQ2M3C7 1700 aa16.29■□□□□ 0.2
CAPN13-201ENST00000295055 GTF2E1P29083 439 aaPredicted RBP16.28■□□□□ 0.2
CAPN13-201ENST00000295055 PRDM4Q9UKN5 801 aa16.28■□□□□ 0.2
CAPN13-201ENST00000295055 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.19
CAPN13-201ENST00000295055 ZNF326Q5BKZ1 582 aaKnown RBP16.27■□□□□ 0.19
CAPN13-201ENST00000295055 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.19
CAPN13-201ENST00000295055 RRP9O43818 475 aaKnown RBP16.26■□□□□ 0.19
CAPN13-201ENST00000295055 L3MBTL2Q969R5 705 aa16.26■□□□□ 0.19
CAPN13-201ENST00000295055 ESF1Q9H501 851 aaKnown RBP16.26■□□□□ 0.19
CAPN13-201ENST00000295055 NOS1P29475 1434 aa16.26■□□□□ 0.19
CAPN13-201ENST00000295055 PPP1R15AO75807 674 aaPredicted RBP16.26■□□□□ 0.19
CAPN13-201ENST00000295055 CNTLNQ9NXG0 1405 aa16.25■□□□□ 0.19
CAPN13-201ENST00000295055 ZMYM3Q14202 1370 aa16.24■□□□□ 0.19
CAPN13-201ENST00000295055 CFAP65Q6ZU64 1925 aaKnown RBP16.23■□□□□ 0.19
CAPN13-201ENST00000295055 CLTCL1P53675 1640 aa16.23■□□□□ 0.19
CAPN13-201ENST00000295055 FBXO31Q5XUX0 539 aaPredicted RBP16.22■□□□□ 0.19
CAPN13-201ENST00000295055 IPO4Q8TEX9 1081 aaKnown RBP16.22■□□□□ 0.19
CAPN13-201ENST00000295055 UGGT1Q9NYU2 1555 aa16.21■□□□□ 0.19
CAPN13-201ENST00000295055 SPATA31E1Q6ZUB1 1445 aa16.21■□□□□ 0.18
CAPN13-201ENST00000295055 PREX1Q8TCU6 1659 aa16.2■□□□□ 0.18
CAPN13-201ENST00000295055 SYNMO15061 1565 aa16.2■□□□□ 0.18
CAPN13-201ENST00000295055 ERVK-7P63135 1459 aa16.2■□□□□ 0.18
CAPN13-201ENST00000295055 MROH2AA6NES4 1674 aa16.19■□□□□ 0.18
CAPN13-201ENST00000295055 RGS3P49796 1198 aa16.19■□□□□ 0.18
CAPN13-201ENST00000295055 RGL3Q3MIN7 710 aa16.19■□□□□ 0.18
CAPN13-201ENST00000295055 ZFP91Q96JP5 570 aaPredicted RBP16.19■□□□□ 0.18
CAPN13-201ENST00000295055 SLC52A1Q9NWF4 448 aa16.19■□□□□ 0.18
CAPN13-201ENST00000295055 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
CAPN13-201ENST00000295055 FAM43AQ8N2R8 423 aa16.18■□□□□ 0.18
CAPN13-201ENST00000295055 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
CAPN13-201ENST00000295055 NEURL4Q96JN8 1562 aa16.17■□□□□ 0.18
CAPN13-201ENST00000295055 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
CAPN13-201ENST00000295055 IDI1Q13907 227 aa16.17■□□□□ 0.18
CAPN13-201ENST00000295055 STAC3Q96MF2 364 aa16.17■□□□□ 0.18
CAPN13-201ENST00000295055 FER1L4A9Z1Z3 1794 aa16.17■□□□□ 0.18
CAPN13-201ENST00000295055 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
CAPN13-201ENST00000295055 KIF1BO60333 1816 aa16.14■□□□□ 0.17
CAPN13-201ENST00000295055 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.17
CAPN13-201ENST00000295055 CEBPAP49715 358 aaPredicted RBP16.13■□□□□ 0.17
CAPN13-201ENST00000295055 NBPF8Q3BBV2 869 aa16.13■□□□□ 0.17
CAPN13-201ENST00000295055 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
CAPN13-201ENST00000295055 MADDQ8WXG6 1647 aa16.13■□□□□ 0.17
CAPN13-201ENST00000295055 NEFMP07197 916 aa16.12■□□□□ 0.17
CAPN13-201ENST00000295055 ADGRB3O60242 1522 aa16.12■□□□□ 0.17
CAPN13-201ENST00000295055 UHRF1BP1Q6BDS2 1440 aa16.12■□□□□ 0.17
CAPN13-201ENST00000295055 C14orf37Q86TY3 774 aa16.12■□□□□ 0.17
CAPN13-201ENST00000295055 C3P01024 1663 aa16.12■□□□□ 0.17
CAPN13-201ENST00000295055 CHGAP10645 457 aaKnown RBP16.12■□□□□ 0.17
CAPN13-201ENST00000295055 TNRQ92752 1358 aa16.1■□□□□ 0.17
CAPN13-201ENST00000295055 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
CAPN13-201ENST00000295055 RIMS1Q86UR5 1692 aaKnown RBP16.08■□□□□ 0.17
CAPN13-201ENST00000295055 CANXP27824 592 aaKnown RBP16.08■□□□□ 0.16
CAPN13-201ENST00000295055 RPGRIP1LQ68CZ1 1315 aa16.08■□□□□ 0.16
CAPN13-201ENST00000295055 TMEM131LA2VDJ0 1609 aa16.08■□□□□ 0.16
CAPN13-201ENST00000295055 PRAG1Q86YV5 1406 aa16.07■□□□□ 0.16
CAPN13-201ENST00000295055 HSP90AA1P07900 732 aaKnown RBP16.06■□□□□ 0.16
CAPN13-201ENST00000295055 SECISBP2LQ93073 1101 aaKnown RBP16.06■□□□□ 0.16
CAPN13-201ENST00000295055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.05■□□□□ 0.16
CAPN13-201ENST00000295055 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
CAPN13-201ENST00000295055 STAG3Q9UJ98 1225 aa16.04■□□□□ 0.16
CAPN13-201ENST00000295055 IFT172Q9UG01 1749 aa16.04■□□□□ 0.16
CAPN13-201ENST00000295055 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
CAPN13-201ENST00000295055 A2ML1A8K2U0 1454 aa16.04■□□□□ 0.16
CAPN13-201ENST00000295055 MYOM2P54296 1465 aa16.04■□□□□ 0.16
CAPN13-201ENST00000295055 ADGRF5Q8IZF2 1346 aa16.02■□□□□ 0.16
CAPN13-201ENST00000295055 MYO5BQ9ULV0 1848 aa16.02■□□□□ 0.16
CAPN13-201ENST00000295055 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.16
CAPN13-201ENST00000295055 PPLO60437 1756 aa16.02■□□□□ 0.15
CAPN13-201ENST00000295055 RALGAPBQ86X10 1494 aa16.01■□□□□ 0.15
CAPN13-201ENST00000295055 NRXN1Q9ULB1 1477 aa16.01■□□□□ 0.15
CAPN13-201ENST00000295055 PTPRMP28827 1452 aa16.01■□□□□ 0.15
CAPN13-201ENST00000295055 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
CAPN13-201ENST00000295055 TEX2Q8IWB9 1127 aa16.01■□□□□ 0.15
CAPN13-201ENST00000295055 CHRM1P11229 460 aaPredicted RBP16■□□□□ 0.15
CAPN13-201ENST00000295055 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
CAPN13-201ENST00000295055 USP35Q9P2H5 1018 aa16■□□□□ 0.15
CAPN13-201ENST00000295055 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
CAPN13-201ENST00000295055 ZFYVE9O95405 1425 aa15.99■□□□□ 0.15
CAPN13-201ENST00000295055 TRPM1Q7Z4N2 1603 aa15.99■□□□□ 0.15
CAPN13-201ENST00000295055 NUTM2DQ5VT03 806 aaPredicted RBP15.98■□□□□ 0.15
CAPN13-201ENST00000295055 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms