RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
LPCAT1-201ENST00000283415 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
LPCAT1-201ENST00000283415 RTN4Q9NQC3 1192 aaKnown RBP18.35■□□□□ 0.53
LPCAT1-201ENST00000283415 MROH2AA6NES4 1674 aa18.35■□□□□ 0.53
LPCAT1-201ENST00000283415 LAS1LQ9Y4W2 734 aaKnown RBP18.34■□□□□ 0.53
LPCAT1-201ENST00000283415 CANXP27824 592 aaKnown RBP18.33■□□□□ 0.53
LPCAT1-201ENST00000283415 MAP3K4Q9Y6R4 1608 aa18.33■□□□□ 0.52
LPCAT1-201ENST00000283415 ABCA6Q8N139 1617 aa18.32■□□□□ 0.52
LPCAT1-201ENST00000283415 MYOM2P54296 1465 aa18.32■□□□□ 0.52
LPCAT1-201ENST00000283415 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
LPCAT1-201ENST00000283415 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
LPCAT1-201ENST00000283415 EFCAB6Q5THR3 1501 aa18.3■□□□□ 0.52
LPCAT1-201ENST00000283415 WDR43Q15061 677 aaKnown RBP eCLIP18.29■□□□□ 0.52
LPCAT1-201ENST00000283415 KIF1BO60333 1816 aa18.29■□□□□ 0.52
LPCAT1-201ENST00000283415 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
LPCAT1-201ENST00000283415 NUTM2DQ5VT03 806 aaPredicted RBP18.26■□□□□ 0.51
LPCAT1-201ENST00000283415 KDM5AP29375 1690 aaKnown RBP18.26■□□□□ 0.51
LPCAT1-201ENST00000283415 PPLO60437 1756 aa18.26■□□□□ 0.51
LPCAT1-201ENST00000283415 DEKP35659 375 aaKnown RBP18.26■□□□□ 0.51
LPCAT1-201ENST00000283415 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
LPCAT1-201ENST00000283415 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
LPCAT1-201ENST00000283415 ARXQ96QS3 562 aa18.25■□□□□ 0.51
LPCAT1-201ENST00000283415 NOP58Q9Y2X3 529 aaKnown RBP18.24■□□□□ 0.51
LPCAT1-201ENST00000283415 ADGRB3O60242 1522 aa18.24■□□□□ 0.51
LPCAT1-201ENST00000283415 SCAF11Q99590 1463 aaKnown RBP18.24■□□□□ 0.51
LPCAT1-201ENST00000283415 NPC1L1Q9UHC9 1359 aa18.22■□□□□ 0.51
LPCAT1-201ENST00000283415 STAC3Q96MF2 364 aa18.22■□□□□ 0.51
LPCAT1-201ENST00000283415 KNSTRNQ9Y448 316 aa18.22■□□□□ 0.51
LPCAT1-201ENST00000283415 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
LPCAT1-201ENST00000283415 PLIN1O60240 522 aa18.22■□□□□ 0.51
LPCAT1-201ENST00000283415 EFCAB2Q5VUJ9 269 aa18.21■□□□□ 0.51
LPCAT1-201ENST00000283415 NLRP13Q86W25 1043 aa18.21■□□□□ 0.51
LPCAT1-201ENST00000283415 PIK3C2BO00750 1634 aa18.21■□□□□ 0.51
LPCAT1-201ENST00000283415 FANCAO15360 1455 aa18.21■□□□□ 0.51
LPCAT1-201ENST00000283415 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
LPCAT1-201ENST00000283415 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
LPCAT1-201ENST00000283415 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
LPCAT1-201ENST00000283415 GGT6Q6P531 493 aa18.19■□□□□ 0.5
LPCAT1-201ENST00000283415 HECW2Q9P2P5 1572 aa18.17■□□□□ 0.5
LPCAT1-201ENST00000283415 SHPRHQ149N8 1683 aa18.17■□□□□ 0.5
LPCAT1-201ENST00000283415 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
LPCAT1-201ENST00000283415 ASXL1Q8IXJ9 1541 aa18.17■□□□□ 0.5
LPCAT1-201ENST00000283415 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
LPCAT1-201ENST00000283415 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
LPCAT1-201ENST00000283415 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
LPCAT1-201ENST00000283415 RGS3P49796 1198 aa18.15■□□□□ 0.5
LPCAT1-201ENST00000283415 PDE3BQ13370 1112 aa18.15■□□□□ 0.5
LPCAT1-201ENST00000283415 ERVK-7P63135 1459 aa18.15■□□□□ 0.5
LPCAT1-201ENST00000283415 ADGRB1O14514 1584 aa18.15■□□□□ 0.5
LPCAT1-201ENST00000283415 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
LPCAT1-201ENST00000283415 ZNF521Q96K83 1311 aa18.14■□□□□ 0.49
LPCAT1-201ENST00000283415 KIF3BO15066 747 aa18.14■□□□□ 0.49
LPCAT1-201ENST00000283415 EIF5BO60841 1220 aaKnown RBP18.14■□□□□ 0.49
LPCAT1-201ENST00000283415 PANK3Q9H999 370 aa18.13■□□□□ 0.49
LPCAT1-201ENST00000283415 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
LPCAT1-201ENST00000283415 ADGRL1O94910 1474 aa18.12■□□□□ 0.49
LPCAT1-201ENST00000283415 AMER1Q5JTC6 1135 aaPredicted RBP18.12■□□□□ 0.49
LPCAT1-201ENST00000283415 SBNO2Q9Y2G9 1366 aa18.12■□□□□ 0.49
LPCAT1-201ENST00000283415 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
LPCAT1-201ENST00000283415 TMF1P82094 1093 aa18.11■□□□□ 0.49
LPCAT1-201ENST00000283415 SLC24A1O60721 1099 aa18.1■□□□□ 0.49
LPCAT1-201ENST00000283415 MLH3Q9UHC1 1453 aa18.1■□□□□ 0.49
LPCAT1-201ENST00000283415 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
LPCAT1-201ENST00000283415 NEFMP07197 916 aa18.1■□□□□ 0.49
LPCAT1-201ENST00000283415 RRP1P56182 461 aaKnown RBP18.1■□□□□ 0.49
LPCAT1-201ENST00000283415 ASXL2Q76L83 1435 aa18.09■□□□□ 0.49
LPCAT1-201ENST00000283415 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
LPCAT1-201ENST00000283415 AFAP1Q8N556 730 aa18.09■□□□□ 0.49
LPCAT1-201ENST00000283415 FRAT1Q92837 279 aaPredicted RBP18.09■□□□□ 0.49
LPCAT1-201ENST00000283415 CAMSAP1Q5T5Y3 1602 aa18.09■□□□□ 0.49
LPCAT1-201ENST00000283415 CDCA7LQ96GN5 454 aa18.08■□□□□ 0.49
LPCAT1-201ENST00000283415 STK26Q9P289 416 aa18.08■□□□□ 0.49
LPCAT1-201ENST00000283415 EXOC6Q8TAG9 804 aa18.07■□□□□ 0.48
LPCAT1-201ENST00000283415 RCAN3Q9UKA8 241 aa18.07■□□□□ 0.48
LPCAT1-201ENST00000283415 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
LPCAT1-201ENST00000283415 ARHGEF28Q8N1W1 1705 aaKnown RBP18.07■□□□□ 0.48
LPCAT1-201ENST00000283415 RICTORQ6R327 1708 aa18.06■□□□□ 0.48
LPCAT1-201ENST00000283415 POGZQ7Z3K3 1410 aa18.05■□□□□ 0.48
LPCAT1-201ENST00000283415 MLECQ14165 292 aa18.05■□□□□ 0.48
LPCAT1-201ENST00000283415 TRMT2AQ8IZ69 625 aaKnown RBP18.04■□□□□ 0.48
LPCAT1-201ENST00000283415 SKAP1Q86WV1 359 aa18.03■□□□□ 0.48
LPCAT1-201ENST00000283415 ABCC3O15438 1527 aa18.03■□□□□ 0.48
LPCAT1-201ENST00000283415 SLC4A3P48751 1232 aa18.03■□□□□ 0.48
LPCAT1-201ENST00000283415 VIRMAQ69YN4 1812 aaKnown RBP18.02■□□□□ 0.48
LPCAT1-201ENST00000283415 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.48
LPCAT1-201ENST00000283415 TRAK1Q9UPV9 953 aa18.01■□□□□ 0.47
LPCAT1-201ENST00000283415 RRP7AQ9Y3A4 280 aaKnown RBP18.01■□□□□ 0.47
LPCAT1-201ENST00000283415 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
LPCAT1-201ENST00000283415 PPP2R1AP30153 589 aa18■□□□□ 0.47
LPCAT1-201ENST00000283415 NOS1P29475 1434 aa17.99■□□□□ 0.47
LPCAT1-201ENST00000283415 DIP2CQ9Y2E4 1556 aa17.99■□□□□ 0.47
LPCAT1-201ENST00000283415 NPATQ14207 1427 aa17.99■□□□□ 0.47
LPCAT1-201ENST00000283415 CLTCQ00610 1675 aaKnown RBP17.98■□□□□ 0.47
LPCAT1-201ENST00000283415 IQSEC2Q5JU85 1478 aa17.98■□□□□ 0.47
LPCAT1-201ENST00000283415 EIF3AQ14152 1382 aaKnown RBP17.98■□□□□ 0.47
LPCAT1-201ENST00000283415 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
LPCAT1-201ENST00000283415 KANK1Q14678 1352 aa17.97■□□□□ 0.47
LPCAT1-201ENST00000283415 GLI2P10070 1586 aa17.97■□□□□ 0.47
LPCAT1-201ENST00000283415 ANKRD26Q9UPS8 1709 aa17.96■□□□□ 0.47
LPCAT1-201ENST00000283415 IPO9Q96P70 1041 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms