RNA–Protein interactions for RNA: ENST00000269829.5

ZNF544-201, Transcript of zinc finger protein 544, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF544, Length 3,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-201ENST00000269829 NOS1P29475 1434 aa11.28□□□□□ -0.6
ZNF544-201ENST00000269829 ADRA2BP18089 450 aa11.27□□□□□ -0.61
ZNF544-201ENST00000269829 CLTCL1P53675 1640 aa11.27□□□□□ -0.61
ZNF544-201ENST00000269829 CEP152O94986 1710 aa11.27□□□□□ -0.61
ZNF544-201ENST00000269829 TET3O43151 1660 aa11.26□□□□□ -0.61
ZNF544-201ENST00000269829 PTPRTO14522 1441 aa11.25□□□□□ -0.61
ZNF544-201ENST00000269829 TRPM2O94759 1503 aa11.25□□□□□ -0.61
ZNF544-201ENST00000269829 ADAMTSL3P82987 1691 aa11.25□□□□□ -0.61
ZNF544-201ENST00000269829 TESK2Q96S53 571 aa11.25□□□□□ -0.61
ZNF544-201ENST00000269829 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
ZNF544-201ENST00000269829 EFCAB6Q5THR3 1501 aa11.24□□□□□ -0.61
ZNF544-201ENST00000269829 SPHKAPQ2M3C7 1700 aa11.24□□□□□ -0.61
ZNF544-201ENST00000269829 KCNA4P22459 653 aa11.23□□□□□ -0.61
ZNF544-201ENST00000269829 IRX6P78412 446 aaPredicted RBP11.23□□□□□ -0.61
ZNF544-201ENST00000269829 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
ZNF544-201ENST00000269829 MROH1Q8NDA8 1641 aa11.23□□□□□ -0.61
ZNF544-201ENST00000269829 NEFLP07196 543 aa11.23□□□□□ -0.61
ZNF544-201ENST00000269829 VGFO15240 615 aaPredicted RBP11.23□□□□□ -0.61
ZNF544-201ENST00000269829 TNNT2P45379 298 aaPredicted RBP11.23□□□□□ -0.61
ZNF544-201ENST00000269829 CEBPAP49715 358 aaPredicted RBP11.23□□□□□ -0.61
ZNF544-201ENST00000269829 SIGLEC1Q9BZZ2 1709 aa11.22□□□□□ -0.61
ZNF544-201ENST00000269829 VWDEQ8N2E2 1590 aa11.22□□□□□ -0.61
ZNF544-201ENST00000269829 FKBP8Q14318 412 aa11.22□□□□□ -0.61
ZNF544-201ENST00000269829 ABCC3O15438 1527 aa11.22□□□□□ -0.61
ZNF544-201ENST00000269829 EIF3AQ14152 1382 aaKnown RBP11.21□□□□□ -0.62
ZNF544-201ENST00000269829 POGKQ9P215 609 aa11.21□□□□□ -0.62
ZNF544-201ENST00000269829 CDCA8Q53HL2 280 aa11.2□□□□□ -0.62
ZNF544-201ENST00000269829 SLC52A1Q9NWF4 448 aa11.2□□□□□ -0.62
ZNF544-201ENST00000269829 TRPM1Q7Z4N2 1603 aa11.2□□□□□ -0.62
ZNF544-201ENST00000269829 KTN1Q86UP2 1357 aaKnown RBP11.2□□□□□ -0.62
ZNF544-201ENST00000269829 CENPJQ9HC77 1338 aaPredicted RBP11.19□□□□□ -0.62
ZNF544-201ENST00000269829 GPRASP1Q5JY77 1395 aa11.19□□□□□ -0.62
ZNF544-201ENST00000269829 LMTK2Q8IWU2 1503 aa11.19□□□□□ -0.62
ZNF544-201ENST00000269829 STAC3Q96MF2 364 aa11.19□□□□□ -0.62
ZNF544-201ENST00000269829 MINK1Q8N4C8 1332 aaPredicted RBP11.19□□□□□ -0.62
ZNF544-201ENST00000269829 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
ZNF544-201ENST00000269829 SCAF11Q99590 1463 aaKnown RBP11.18□□□□□ -0.62
ZNF544-201ENST00000269829 SUPT16HQ9Y5B9 1047 aaKnown RBP11.17□□□□□ -0.62
ZNF544-201ENST00000269829 KDM5AP29375 1690 aaKnown RBP11.17□□□□□ -0.62
ZNF544-201ENST00000269829 C14orf93Q9H972 538 aaKnown RBP11.16□□□□□ -0.62
ZNF544-201ENST00000269829 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
ZNF544-201ENST00000269829 KIF1BO60333 1816 aa11.16□□□□□ -0.62
ZNF544-201ENST00000269829 MYBBP1AQ9BQG0 1328 aaKnown RBP11.16□□□□□ -0.62
ZNF544-201ENST00000269829 SLC12A5Q9H2X9 1139 aa11.16□□□□□ -0.62
ZNF544-201ENST00000269829 RALBP1Q15311 655 aa11.15□□□□□ -0.62
ZNF544-201ENST00000269829 MADDQ8WXG6 1647 aa11.15□□□□□ -0.62
ZNF544-201ENST00000269829 RPGRIP1LQ68CZ1 1315 aa11.14□□□□□ -0.63
ZNF544-201ENST00000269829 PRAM1Q96QH2 718 aa11.14□□□□□ -0.63
ZNF544-201ENST00000269829 FER1L4A9Z1Z3 1794 aa11.14□□□□□ -0.63
ZNF544-201ENST00000269829 NLRP13Q86W25 1043 aa11.14□□□□□ -0.63
ZNF544-201ENST00000269829 CAMSAP1Q5T5Y3 1602 aa11.14□□□□□ -0.63
ZNF544-201ENST00000269829 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
ZNF544-201ENST00000269829 PER1O15534 1290 aaPredicted RBP11.13□□□□□ -0.63
ZNF544-201ENST00000269829 ZMYM3Q14202 1370 aa11.13□□□□□ -0.63
ZNF544-201ENST00000269829 ZNF142P52746 1687 aaPredicted RBP11.12□□□□□ -0.63
ZNF544-201ENST00000269829 WAPLQ7Z5K2 1190 aa11.12□□□□□ -0.63
ZNF544-201ENST00000269829 PPP6R1Q9UPN7 881 aa11.12□□□□□ -0.63
ZNF544-201ENST00000269829 PNISRQ8TF01 805 aaKnown RBP11.11□□□□□ -0.63
ZNF544-201ENST00000269829 WDR43Q15061 677 aaKnown RBP eCLIP11.11□□□□□ -0.63
ZNF544-201ENST00000269829 NEURL4Q96JN8 1562 aa11.11□□□□□ -0.63
ZNF544-201ENST00000269829 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
ZNF544-201ENST00000269829 SYNMO15061 1565 aa11.1□□□□□ -0.63
ZNF544-201ENST00000269829 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
ZNF544-201ENST00000269829 SLC26A8Q96RN1 970 aa11.1□□□□□ -0.63
ZNF544-201ENST00000269829 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
ZNF544-201ENST00000269829 MYOM2P54296 1465 aa11.09□□□□□ -0.63
ZNF544-201ENST00000269829 MORC1Q86VD1 984 aa11.09□□□□□ -0.63
ZNF544-201ENST00000269829 PIK3C2GO75747 1445 aa11.08□□□□□ -0.64
ZNF544-201ENST00000269829 ERVK-7P63135 1459 aa11.08□□□□□ -0.64
ZNF544-201ENST00000269829 CCDC146Q8IYE0 955 aa11.08□□□□□ -0.64
ZNF544-201ENST00000269829 CLTCQ00610 1675 aaKnown RBP11.08□□□□□ -0.64
ZNF544-201ENST00000269829 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
ZNF544-201ENST00000269829 ARHGAP31Q2M1Z3 1444 aa11.07□□□□□ -0.64
ZNF544-201ENST00000269829 PPP2R1AP30153 589 aa11.07□□□□□ -0.64
ZNF544-201ENST00000269829 TNRQ92752 1358 aa11.06□□□□□ -0.64
ZNF544-201ENST00000269829 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
ZNF544-201ENST00000269829 PPM1GO15355 546 aaPredicted RBP11.06□□□□□ -0.64
ZNF544-201ENST00000269829 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
ZNF544-201ENST00000269829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.06□□□□□ -0.64
ZNF544-201ENST00000269829 POLR1AO95602 1720 aaPredicted RBP11.06□□□□□ -0.64
ZNF544-201ENST00000269829 RIMS2Q9UQ26 1411 aa11.06□□□□□ -0.64
ZNF544-201ENST00000269829 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
ZNF544-201ENST00000269829 ZBED9Q6R2W3 1325 aa11.06□□□□□ -0.64
ZNF544-201ENST00000269829 C3P01024 1663 aa11.06□□□□□ -0.64
ZNF544-201ENST00000269829 NEUROD2Q15784 382 aa11.05□□□□□ -0.64
ZNF544-201ENST00000269829 ADAMTS8Q9UP79 889 aa11.05□□□□□ -0.64
ZNF544-201ENST00000269829 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
ZNF544-201ENST00000269829 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
ZNF544-201ENST00000269829 CDK19Q9BWU1 502 aa11.04□□□□□ -0.64
ZNF544-201ENST00000269829 GGNBP2Q9H3C7 697 aa11.04□□□□□ -0.64
ZNF544-201ENST00000269829 NSD3Q9BZ95 1437 aa11.04□□□□□ -0.64
ZNF544-201ENST00000269829 SPATA31D1Q6ZQQ2 1576 aa11.04□□□□□ -0.64
ZNF544-201ENST00000269829 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
ZNF544-201ENST00000269829 PREX1Q8TCU6 1659 aa11.04□□□□□ -0.64
ZNF544-201ENST00000269829 PIK3C2BO00750 1634 aa11.03□□□□□ -0.64
ZNF544-201ENST00000269829 PLEKHG5O94827 1062 aa11.03□□□□□ -0.64
ZNF544-201ENST00000269829 CABP1Q9NZU7 370 aa11.03□□□□□ -0.64
ZNF544-201ENST00000269829 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.02□□□□□ -0.64
ZNF544-201ENST00000269829 NEXMIFQ5QGS0 1516 aa11.02□□□□□ -0.64
ZNF544-201ENST00000269829 IQGAP1P46940 1657 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms