RNA–Protein interactions for RNA: ENST00000262055.8

LETMD1-201, Transcript of LETM1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETMD1, Length 2,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-201ENST00000262055 IFT172Q9UG01 1749 aa20.83■□□□□ 0.93
LETMD1-201ENST00000262055 NEURL4Q96JN8 1562 aa20.83■□□□□ 0.92
LETMD1-201ENST00000262055 KDM5AP29375 1690 aaKnown RBP20.82■□□□□ 0.92
LETMD1-201ENST00000262055 PPLO60437 1756 aa20.81■□□□□ 0.92
LETMD1-201ENST00000262055 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
LETMD1-201ENST00000262055 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
LETMD1-201ENST00000262055 STAG3Q9UJ98 1225 aa20.77■□□□□ 0.92
LETMD1-201ENST00000262055 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.91
LETMD1-201ENST00000262055 UHRF1BP1Q6BDS2 1440 aa20.77■□□□□ 0.91
LETMD1-201ENST00000262055 DCAF11Q8TEB1 546 aa20.76■□□□□ 0.91
LETMD1-201ENST00000262055 NUTM2DQ5VT03 806 aaPredicted RBP20.75■□□□□ 0.91
LETMD1-201ENST00000262055 KDM2AQ9Y2K7 1162 aa20.74■□□□□ 0.91
LETMD1-201ENST00000262055 ZFYVE9O95405 1425 aa20.73■□□□□ 0.91
LETMD1-201ENST00000262055 LMTK3Q96Q04 1460 aa20.72■□□□□ 0.91
LETMD1-201ENST00000262055 TIMELESSQ9UNS1 1208 aa20.72■□□□□ 0.91
LETMD1-201ENST00000262055 TMEM2Q9UHN6 1383 aa20.71■□□□□ 0.91
LETMD1-201ENST00000262055 RIMS2Q9UQ26 1411 aa20.71■□□□□ 0.91
LETMD1-201ENST00000262055 ARHGAP23Q9P227 1491 aa20.7■□□□□ 0.9
LETMD1-201ENST00000262055 SLIT1O75093 1534 aa20.7■□□□□ 0.9
LETMD1-201ENST00000262055 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
LETMD1-201ENST00000262055 ADGRF5Q8IZF2 1346 aa20.7■□□□□ 0.9
LETMD1-201ENST00000262055 NBPF8Q3BBV2 869 aa20.69■□□□□ 0.9
LETMD1-201ENST00000262055 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
LETMD1-201ENST00000262055 LTKP29376 864 aa20.68■□□□□ 0.9
LETMD1-201ENST00000262055 MYOM2P54296 1465 aa20.68■□□□□ 0.9
LETMD1-201ENST00000262055 THEMISQ8N1K5 641 aaPredicted RBP20.68■□□□□ 0.9
LETMD1-201ENST00000262055 RPGRIP1LQ68CZ1 1315 aa20.68■□□□□ 0.9
LETMD1-201ENST00000262055 HSPA2P54652 639 aa20.66■□□□□ 0.9
LETMD1-201ENST00000262055 PRAG1Q86YV5 1406 aa20.66■□□□□ 0.9
LETMD1-201ENST00000262055 NRXN1Q9ULB1 1477 aa20.66■□□□□ 0.9
LETMD1-201ENST00000262055 NRXN3Q9Y4C0 1643 aa20.64■□□□□ 0.89
LETMD1-201ENST00000262055 POLR1AO95602 1720 aaPredicted RBP20.63■□□□□ 0.89
LETMD1-201ENST00000262055 PIK3C2GO75747 1445 aa20.63■□□□□ 0.89
LETMD1-201ENST00000262055 IQGAP1P46940 1657 aa20.63■□□□□ 0.89
LETMD1-201ENST00000262055 TRPM1Q7Z4N2 1603 aa20.62■□□□□ 0.89
LETMD1-201ENST00000262055 TXNDC2Q86VQ3 553 aa20.62■□□□□ 0.89
LETMD1-201ENST00000262055 SCAF11Q99590 1463 aaKnown RBP20.61■□□□□ 0.89
LETMD1-201ENST00000262055 VGFO15240 615 aaPredicted RBP20.6■□□□□ 0.89
LETMD1-201ENST00000262055 PRKCSHP14314 528 aaPredicted RBP20.6■□□□□ 0.89
LETMD1-201ENST00000262055 SETD1AO15047 1707 aaKnown RBP20.6■□□□□ 0.89
LETMD1-201ENST00000262055 STRCQ7RTU9 1775 aa20.59■□□□□ 0.89
LETMD1-201ENST00000262055 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.57■□□□□ 0.88
LETMD1-201ENST00000262055 NCKAP5LQ9HCH0 1330 aa20.57■□□□□ 0.88
LETMD1-201ENST00000262055 CFAP70Q5T0N1 1121 aa20.57■□□□□ 0.88
LETMD1-201ENST00000262055 STAC3Q96MF2 364 aa20.57■□□□□ 0.88
LETMD1-201ENST00000262055 SETBP1Q9Y6X0 1596 aa20.57■□□□□ 0.88
LETMD1-201ENST00000262055 NBPF1Q3BBV0 1214 aa20.56■□□□□ 0.88
LETMD1-201ENST00000262055 EID1Q9Y6B2 187 aa20.56■□□□□ 0.88
LETMD1-201ENST00000262055 KIAA1210Q9ULL0 1709 aa20.56■□□□□ 0.88
LETMD1-201ENST00000262055 PLEKHG1Q9ULL1 1385 aa20.56■□□□□ 0.88
LETMD1-201ENST00000262055 ANKLE2Q86XL3 938 aa20.56■□□□□ 0.88
LETMD1-201ENST00000262055 ALKQ9UM73 1620 aa20.55■□□□□ 0.88
LETMD1-201ENST00000262055 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
LETMD1-201ENST00000262055 ERICH6Q7L0X2 663 aa20.54■□□□□ 0.88
LETMD1-201ENST00000262055 RALGAPBQ86X10 1494 aa20.54■□□□□ 0.88
LETMD1-201ENST00000262055 ASXL1Q8IXJ9 1541 aa20.54■□□□□ 0.88
LETMD1-201ENST00000262055 HDGFP51858 240 aaKnown RBP20.53■□□□□ 0.88
LETMD1-201ENST00000262055 C14orf93Q9H972 538 aaKnown RBP20.52■□□□□ 0.88
LETMD1-201ENST00000262055 MED14O60244 1454 aa20.52■□□□□ 0.88
LETMD1-201ENST00000262055 ADGRB1O14514 1584 aa20.52■□□□□ 0.87
LETMD1-201ENST00000262055 LAMC1P11047 1609 aa20.52■□□□□ 0.87
LETMD1-201ENST00000262055 SLC26A8Q96RN1 970 aa20.51■□□□□ 0.87
LETMD1-201ENST00000262055 TMEM132EQ6IEE7 984 aa20.5■□□□□ 0.87
LETMD1-201ENST00000262055 NPHP4O75161 1426 aaPredicted RBP20.49■□□□□ 0.87
LETMD1-201ENST00000262055 BCANQ96GW7 911 aa20.49■□□□□ 0.87
LETMD1-201ENST00000262055 ROCK2O75116 1388 aaKnown RBP20.48■□□□□ 0.87
LETMD1-201ENST00000262055 METP08581 1390 aa20.48■□□□□ 0.87
LETMD1-201ENST00000262055 GPRASP1Q5JY77 1395 aa20.47■□□□□ 0.87
LETMD1-201ENST00000262055 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
LETMD1-201ENST00000262055 RBM19Q9Y4C8 960 aaKnown RBP20.44■□□□□ 0.86
LETMD1-201ENST00000262055 DIP2AQ14689 1571 aa20.43■□□□□ 0.86
LETMD1-201ENST00000262055 CARD11Q9BXL7 1154 aa20.43■□□□□ 0.86
LETMD1-201ENST00000262055 PTPRUQ92729 1446 aa20.43■□□□□ 0.86
LETMD1-201ENST00000262055 TBX22Q9Y458 520 aa20.42■□□□□ 0.86
LETMD1-201ENST00000262055 CHD2O14647 1828 aaKnown RBP20.41■□□□□ 0.86
LETMD1-201ENST00000262055 ARHGEF28Q8N1W1 1705 aaKnown RBP20.4■□□□□ 0.86
LETMD1-201ENST00000262055 YTHDC2Q9H6S0 1430 aaKnown RBP20.4■□□□□ 0.86
LETMD1-201ENST00000262055 SLC24A1O60721 1099 aa20.39■□□□□ 0.86
LETMD1-201ENST00000262055 STK26Q9P289 416 aa20.39■□□□□ 0.85
LETMD1-201ENST00000262055 STRCP1A6NGW2 1772 aa20.39■□□□□ 0.85
LETMD1-201ENST00000262055 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
LETMD1-201ENST00000262055 TRAK1Q9UPV9 953 aa20.38■□□□□ 0.85
LETMD1-201ENST00000262055 USP47Q96K76 1375 aa20.37■□□□□ 0.85
LETMD1-201ENST00000262055 XRN1Q8IZH2 1706 aaKnown RBP20.37■□□□□ 0.85
LETMD1-201ENST00000262055 KNDC1Q76NI1 1749 aa20.36■□□□□ 0.85
LETMD1-201ENST00000262055 LRPPRCP42704 1394 aaKnown RBP20.35■□□□□ 0.85
LETMD1-201ENST00000262055 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
LETMD1-201ENST00000262055 FANCIQ9NVI1 1328 aa20.33■□□□□ 0.85
LETMD1-201ENST00000262055 AMOTL2Q9Y2J4 779 aa20.33■□□□□ 0.84
LETMD1-201ENST00000262055 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
LETMD1-201ENST00000262055 TECPR2O15040 1411 aa20.32■□□□□ 0.84
LETMD1-201ENST00000262055 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
LETMD1-201ENST00000262055 ROBO2Q9HCK4 1378 aa20.32■□□□□ 0.84
LETMD1-201ENST00000262055 CPS1P31327 1500 aa20.32■□□□□ 0.84
LETMD1-201ENST00000262055 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
LETMD1-201ENST00000262055 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
LETMD1-201ENST00000262055 ST20-MTHFSA0A0A6YYL1 179 aa20.31■□□□□ 0.84
LETMD1-201ENST00000262055 KCNA6P17658 529 aa20.31■□□□□ 0.84
LETMD1-201ENST00000262055 EIF4G2P78344 907 aaKnown RBP eCLIP20.3■□□□□ 0.84
LETMD1-201ENST00000262055 QRICH2Q9H0J4 1663 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms