RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ODF2Q5BJF6 829 aa4.98□□□□□ -1.61
RNF38-201ENST00000259605 STK32BQ9NY57 414 aa4.98□□□□□ -1.61
RNF38-201ENST00000259605 MYO1BO43795 1136 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 GRM1Q13255 1194 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.97□□□□□ -1.61
RNF38-201ENST00000259605 UBE2Q2Q8WVN8 375 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 C9orf78Q9NZ63 289 aaPredicted RBP4.97□□□□□ -1.61
RNF38-201ENST00000259605 ZRANB1Q9UGI0 708 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 ZBTB24O43167 697 aaPredicted RBP4.97□□□□□ -1.61
RNF38-201ENST00000259605 PKD2Q13563 968 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 CADPS2Q86UW7 1296 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 NLRP6P59044 892 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 TRIM29Q14134 588 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 GLIPR1L2Q4G1C9 344 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 CABP2Q9NPB3 220 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 MIA2Q96PC5 1412 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 TSR1Q2NL82 804 aaKnown RBP4.97□□□□□ -1.61
RNF38-201ENST00000259605 AK7Q96M32 723 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 TBC1D2BQ9UPU7 963 aa4.97□□□□□ -1.61
RNF38-201ENST00000259605 A0A0U1RQG5 324 aaPredicted RBP4.96□□□□□ -1.61
RNF38-201ENST00000259605 DRC1Q96MC2 740 aa4.96□□□□□ -1.61
RNF38-201ENST00000259605 GPR162Q16538 588 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 CSPP1Q1MSJ5 1256 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 RAB3GAP2Q9H2M9 1393 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 ADAMTS2O95450 1211 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 APPP05067 770 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 ZSCAN29Q8IWY8 852 aaPredicted RBP4.96□□□□□ -1.62
RNF38-201ENST00000259605 BCL2L13Q9BXK5 485 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 B4DLN1 442 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 MRPL12P52815 198 aaKnown RBP4.96□□□□□ -1.62
RNF38-201ENST00000259605 DDX10Q13206 875 aaKnown RBP4.96□□□□□ -1.62
RNF38-201ENST00000259605 HSP90AB4PQ58FF6 505 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 ATF7IPQ6VMQ6 1270 aa4.96□□□□□ -1.62
RNF38-201ENST00000259605 LPXNO60711 386 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 CCDC27Q2M243 656 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 SLF2Q8IX21 1173 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 NGEFQ8N5V2 710 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 ABTB2Q8N961 1025 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 MYCNP04198 464 aaPredicted RBP4.95□□□□□ -1.62
RNF38-201ENST00000259605 TPM3P06753 285 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 SLC4A10Q6U841 1118 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 BRMS1Q9HCU9 246 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 WDR70Q9NW82 654 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 ROCK2O75116 1388 aaKnown RBP4.95□□□□□ -1.62
RNF38-201ENST00000259605 XBP1P17861 261 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 CC2D1BQ5T0F9 858 aaKnown RBP4.95□□□□□ -1.62
RNF38-201ENST00000259605 WDR78Q5VTH9 848 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 HDAC9Q9UKV0 1011 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 MSH6P52701 1360 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 STARD3NLO95772 234 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 KIF22Q14807 665 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 CT47A1Q5JQC4 288 aaPredicted RBP4.95□□□□□ -1.62
RNF38-201ENST00000259605 PPP4R3AQ6IN85 833 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 JDP2Q8WYK2 163 aa4.95□□□□□ -1.62
RNF38-201ENST00000259605 CGNL1Q0VF96 1302 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 A0A087WZG4 1122 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 ZBTB22O15209 634 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 MFAP1P55081 439 aaKnown RBP4.94□□□□□ -1.62
RNF38-201ENST00000259605 CABP4P57796 275 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 SART3Q15020 963 aaKnown RBP4.94□□□□□ -1.62
RNF38-201ENST00000259605 VSIG10Q8N0Z9 540 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 SLC4A3P48751 1232 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 ANKRD20A12PQ8NF67 263 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 PMFBP1Q8TBY8 1022 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 RUFY2Q8WXA3 655 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 ZNF287Q9HBT7 754 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 TRAK1Q9UPV9 953 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 TNIKQ9UKE5 1360 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 G3BP1Q13283 466 aaKnown RBP eCLIP4.94□□□□□ -1.62
RNF38-201ENST00000259605 TNIP1Q15025 636 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 SF3A1Q15459 793 aaKnown RBP4.94□□□□□ -1.62
RNF38-201ENST00000259605 TPD52L1Q16890 204 aaPredicted RBP4.94□□□□□ -1.62
RNF38-201ENST00000259605 RIC3Q7Z5B4 369 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 VTI1AQ96AJ9 217 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 SLC52A1Q9NWF4 448 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 EXOC5O00471 708 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 TPM1P09493 284 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 RPGRQ92834 1020 aaKnown RBP4.94□□□□□ -1.62
RNF38-201ENST00000259605 SCLT1Q96NL6 688 aa4.94□□□□□ -1.62
RNF38-201ENST00000259605 BMS1Q14692 1282 aaKnown RBP4.93□□□□□ -1.62
RNF38-201ENST00000259605 KCNH5Q8NCM2 988 aa4.93□□□□□ -1.62
RNF38-201ENST00000259605 PNISRQ8TF01 805 aaKnown RBP4.93□□□□□ -1.62
RNF38-201ENST00000259605 DDX54Q8TDD1 881 aaKnown RBP4.93□□□□□ -1.62
RNF38-201ENST00000259605 PKNOX2Q96KN3 472 aa4.93□□□□□ -1.62
RNF38-201ENST00000259605 SUPT16HQ9Y5B9 1047 aaKnown RBP4.93□□□□□ -1.62
RNF38-201ENST00000259605 KTN1Q86UP2 1357 aaKnown RBP4.93□□□□□ -1.62
RNF38-201ENST00000259605 LMTK3Q96Q04 1460 aa4.93□□□□□ -1.62
RNF38-201ENST00000259605 TNNT3P45378 269 aaPredicted RBP4.93□□□□□ -1.62
RNF38-201ENST00000259605 PDE4CQ08493 712 aa4.93□□□□□ -1.62
RNF38-201ENST00000259605 SAFBQ15424 915 aaKnown RBP eCLIP4.93□□□□□ -1.62
RNF38-201ENST00000259605 MINK1Q8N4C8 1332 aaPredicted RBP4.93□□□□□ -1.62
RNF38-201ENST00000259605 NEBLO76041 1014 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 PLCB2Q00722 1185 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 NOL8Q76FK4 1167 aaKnown RBP4.92□□□□□ -1.62
RNF38-201ENST00000259605 TRIM6-TRIM34B2RNG4 842 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 GAS2L2Q8NHY3 880 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 CCDC97Q96F63 343 aaPredicted RBP4.92□□□□□ -1.62
RNF38-201ENST00000259605 MPHOSPH8Q99549 860 aa4.92□□□□□ -1.62
RNF38-201ENST00000259605 HIRIP3Q9BW71 556 aaPredicted RBP4.92□□□□□ -1.62
RNF38-201ENST00000259605 HOOK1Q9UJC3 728 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms