RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 DCAF8L2P0C7V8 631 aa7.17□□□□□ -1.26
RNF38-201ENST00000259605 FAM9AQ8IZU1 332 aaPredicted RBP6.98□□□□□ -1.29
RNF38-201ENST00000259605 APLP2Q06481 763 aa6.49□□□□□ -1.37
RNF38-201ENST00000259605 NISCHQ9Y2I1 1504 aa6.46□□□□□ -1.37
RNF38-201ENST00000259605 MYT1LQ9UL68 1186 aa6.35□□□□□ -1.39
RNF38-201ENST00000259605 CHIC1Q5VXU3 224 aa6.32□□□□□ -1.4
RNF38-201ENST00000259605 AEBP2Q6ZN18 517 aaPredicted RBP6.24□□□□□ -1.41
RNF38-201ENST00000259605 SUPT5HO00267 1087 aaKnown RBP6.23□□□□□ -1.41
RNF38-201ENST00000259605 ATP1B4Q9UN42 357 aaPredicted RBP6.22□□□□□ -1.41
RNF38-201ENST00000259605 PELP1Q8IZL8 1130 aaKnown RBP6.22□□□□□ -1.41
RNF38-201ENST00000259605 MYT1Q01538 1121 aa6.17□□□□□ -1.42
RNF38-201ENST00000259605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.17□□□□□ -1.42
RNF38-201ENST00000259605 HNRNPUL2Q1KMD3 747 aaKnown RBP6.17□□□□□ -1.42
RNF38-201ENST00000259605 ESF1Q9H501 851 aaKnown RBP6.1□□□□□ -1.43
RNF38-201ENST00000259605 NPM1P06748 294 aaKnown RBP eCLIP6.05□□□□□ -1.44
RNF38-201ENST00000259605 EHMT2Q96KQ7 1210 aa6.05□□□□□ -1.44
RNF38-201ENST00000259605 TTBK1Q5TCY1 1321 aaPredicted RBP6.05□□□□□ -1.44
RNF38-201ENST00000259605 SHROOM4Q9ULL8 1493 aa6.04□□□□□ -1.44
RNF38-201ENST00000259605 RANGAP1P46060 587 aaPredicted RBP6.02□□□□□ -1.45
RNF38-201ENST00000259605 BCANQ96GW7 911 aa5.99□□□□□ -1.45
RNF38-201ENST00000259605 UBTFP17480 764 aaKnown RBP5.99□□□□□ -1.45
RNF38-201ENST00000259605 CCER1Q8TC90 406 aaPredicted RBP5.98□□□□□ -1.45
RNF38-201ENST00000259605 FBLN2P98095 1184 aa5.96□□□□□ -1.46
RNF38-201ENST00000259605 SLC4A1APQ9BWU0 796 aaKnown RBP5.96□□□□□ -1.46
RNF38-201ENST00000259605 TRIM41Q8WV44 630 aa5.91□□□□□ -1.46
RNF38-201ENST00000259605 NEFMP07197 916 aa5.87□□□□□ -1.47
RNF38-201ENST00000259605 STAG3Q9UJ98 1225 aa5.87□□□□□ -1.47
RNF38-201ENST00000259605 NPM2Q86SE8 214 aaKnown RBP5.84□□□□□ -1.47
RNF38-201ENST00000259605 ZBTB47Q9UFB7 747 aaPredicted RBP5.82□□□□□ -1.48
RNF38-201ENST00000259605 DCAF8L1A6NGE4 600 aa5.82□□□□□ -1.48
RNF38-201ENST00000259605 TRHP20396 242 aaPredicted RBP5.82□□□□□ -1.48
RNF38-201ENST00000259605 CDK11AQ9UQ88 783 aaPredicted RBP5.82□□□□□ -1.48
RNF38-201ENST00000259605 SLC24A1O60721 1099 aa5.81□□□□□ -1.48
RNF38-201ENST00000259605 PLPPR3Q6T4P5 718 aa5.81□□□□□ -1.48
RNF38-201ENST00000259605 ERICH6Q7L0X2 663 aa5.81□□□□□ -1.48
RNF38-201ENST00000259605 POLR3GLQ9BT43 218 aa5.8□□□□□ -1.48
RNF38-201ENST00000259605 FOXD1Q16676 465 aa5.8□□□□□ -1.48
RNF38-201ENST00000259605 ABCC9O60706 1549 aa5.8□□□□□ -1.48
RNF38-201ENST00000259605 NEFLP07196 543 aa5.79□□□□□ -1.48
RNF38-201ENST00000259605 PABPN1Q86U42 306 aaKnown RBP eCLIP5.79□□□□□ -1.48
RNF38-201ENST00000259605 HAP1P54257 671 aaPredicted RBP5.78□□□□□ -1.48
RNF38-201ENST00000259605 PHF23Q9BUL5 403 aaPredicted RBP5.77□□□□□ -1.49
RNF38-201ENST00000259605 DAXXQ9UER7 740 aaPredicted RBP5.77□□□□□ -1.49
RNF38-201ENST00000259605 C14orf37Q86TY3 774 aa5.76□□□□□ -1.49
RNF38-201ENST00000259605 SCAF1Q9H7N4 1312 aaKnown RBP5.75□□□□□ -1.49
RNF38-201ENST00000259605 A0A0G2JS52 829 aa5.74□□□□□ -1.49
RNF38-201ENST00000259605 CHMP7Q8WUX9 453 aaPredicted RBP5.74□□□□□ -1.49
RNF38-201ENST00000259605 ARID4BQ4LE39 1312 aaPredicted RBP5.74□□□□□ -1.49
RNF38-201ENST00000259605 TRIM52Q96A61 297 aa5.7□□□□□ -1.5
RNF38-201ENST00000259605 ITGAEP38570 1179 aa5.69□□□□□ -1.5
RNF38-201ENST00000259605 CHGAP10645 457 aaKnown RBP5.67□□□□□ -1.5
RNF38-201ENST00000259605 PPP1R15AO75807 674 aaPredicted RBP5.67□□□□□ -1.5
RNF38-201ENST00000259605 PCGF6Q9BYE7 350 aa5.67□□□□□ -1.5
RNF38-201ENST00000259605 ZEB1P37275 1124 aaPredicted RBP5.67□□□□□ -1.5
RNF38-201ENST00000259605 CLSPNQ9HAW4 1339 aa5.65□□□□□ -1.5
RNF38-201ENST00000259605 NPHP1O15259 732 aa5.64□□□□□ -1.51
RNF38-201ENST00000259605 CENPBP07199 599 aaPredicted RBP5.63□□□□□ -1.51
RNF38-201ENST00000259605 HDGFP51858 240 aaKnown RBP5.63□□□□□ -1.51
RNF38-201ENST00000259605 FAM50AQ14320 339 aaKnown RBP5.62□□□□□ -1.51
RNF38-201ENST00000259605 ZNF777Q9ULD5 760 aaPredicted RBP5.62□□□□□ -1.51
RNF38-201ENST00000259605 CDK11BP21127 795 aaKnown RBP5.6□□□□□ -1.51
RNF38-201ENST00000259605 ERCC6Q03468 1493 aa5.6□□□□□ -1.51
RNF38-201ENST00000259605 EIF4G2P78344 907 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNF38-201ENST00000259605 YTHDC1Q96MU7 727 aaKnown RBP5.6□□□□□ -1.51
RNF38-201ENST00000259605 TMX4Q9H1E5 349 aaPredicted RBP5.6□□□□□ -1.51
RNF38-201ENST00000259605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.59□□□□□ -1.51
RNF38-201ENST00000259605 TSPY4P0CV99 314 aa5.57□□□□□ -1.52
RNF38-201ENST00000259605 TSPY10P0CW01 314 aa5.57□□□□□ -1.52
RNF38-201ENST00000259605 ZNF326Q5BKZ1 582 aaKnown RBP5.57□□□□□ -1.52
RNF38-201ENST00000259605 CANXP27824 592 aaKnown RBP5.56□□□□□ -1.52
RNF38-201ENST00000259605 CNGB1Q14028 1251 aaPredicted RBP5.55□□□□□ -1.52
RNF38-201ENST00000259605 ZBTB7CA1YPR0 619 aa5.55□□□□□ -1.52
RNF38-201ENST00000259605 ZNF316A6NFI3 1004 aaPredicted RBP5.54□□□□□ -1.52
RNF38-201ENST00000259605 GOLGA2Q08379 1002 aa5.54□□□□□ -1.52
RNF38-201ENST00000259605 KRI1Q8N9T8 703 aaKnown RBP5.53□□□□□ -1.52
RNF38-201ENST00000259605 LMOD2Q6P5Q4 547 aa5.52□□□□□ -1.53
RNF38-201ENST00000259605 ARID3CA6NKF2 412 aa5.52□□□□□ -1.53
RNF38-201ENST00000259605 ACIN1Q9UKV3 1341 aaKnown RBP5.51□□□□□ -1.53
RNF38-201ENST00000259605 PLEKHD1A6NEE1 506 aa5.51□□□□□ -1.53
RNF38-201ENST00000259605 ARXQ96QS3 562 aa5.51□□□□□ -1.53
RNF38-201ENST00000259605 CCDC9Q9Y3X0 531 aaKnown RBP5.5□□□□□ -1.53
RNF38-201ENST00000259605 MEX3CQ5U5Q3 659 aaKnown RBP5.49□□□□□ -1.53
RNF38-201ENST00000259605 KCNH8Q96L42 1107 aa5.49□□□□□ -1.53
RNF38-201ENST00000259605 SF3B2Q13435 895 aaKnown RBP5.48□□□□□ -1.53
RNF38-201ENST00000259605 ANO8Q9HCE9 1232 aaPredicted RBP5.47□□□□□ -1.53
RNF38-201ENST00000259605 PLEKHG5O94827 1062 aa5.47□□□□□ -1.53
RNF38-201ENST00000259605 HMGB2P26583 209 aaKnown RBP5.47□□□□□ -1.53
RNF38-201ENST00000259605 P3H3Q8IVL6 736 aa5.45□□□□□ -1.54
RNF38-201ENST00000259605 SENP3Q9H4L4 574 aaPredicted RBP5.45□□□□□ -1.54
RNF38-201ENST00000259605 CSRNP3Q8WYN3 585 aa5.45□□□□□ -1.54
RNF38-201ENST00000259605 BCL11AQ9H165 835 aa5.44□□□□□ -1.54
RNF38-201ENST00000259605 EID1Q9Y6B2 187 aa5.43□□□□□ -1.54
RNF38-201ENST00000259605 G3V3G9 751 aa5.43□□□□□ -1.54
RNF38-201ENST00000259605 PRKCSHP14314 528 aaPredicted RBP5.43□□□□□ -1.54
RNF38-201ENST00000259605 DCAF8Q5TAQ9 597 aa5.43□□□□□ -1.54
RNF38-201ENST00000259605 WASHC2AQ641Q2 1341 aa5.43□□□□□ -1.54
RNF38-201ENST00000259605 MLECQ14165 292 aa5.42□□□□□ -1.54
RNF38-201ENST00000259605 MYH16Q9H6N6 1097 aa5.42□□□□□ -1.54
RNF38-201ENST00000259605 POGKQ9P215 609 aa5.41□□□□□ -1.54
RNF38-201ENST00000259605 CHMP4AQ9BY43 222 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms