RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 GRPEL1Q9HAV7 217 aa16.62■□□□□ 0.25
COLGALT1-201ENST00000252599 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
COLGALT1-201ENST00000252599 CHRM1P11229 460 aaPredicted RBP16.61■□□□□ 0.25
COLGALT1-201ENST00000252599 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
COLGALT1-201ENST00000252599 TDO2P48775 406 aa16.61■□□□□ 0.25
COLGALT1-201ENST00000252599 IRX5P78411 483 aaPredicted RBP16.61■□□□□ 0.25
COLGALT1-201ENST00000252599 BACH2Q9BYV9 841 aa16.61■□□□□ 0.25
COLGALT1-201ENST00000252599 NUP155O75694 1391 aa16.61■□□□□ 0.25
COLGALT1-201ENST00000252599 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
COLGALT1-201ENST00000252599 KIF3AQ9Y496 699 aa16.6■□□□□ 0.25
COLGALT1-201ENST00000252599 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
COLGALT1-201ENST00000252599 GOLGA6L6A8MZA4 724 aa16.6■□□□□ 0.25
COLGALT1-201ENST00000252599 NCOA2Q15596 1464 aa16.59■□□□□ 0.25
COLGALT1-201ENST00000252599 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.25
COLGALT1-201ENST00000252599 ST20-MTHFSA0A0A6YYL1 179 aa16.58■□□□□ 0.24
COLGALT1-201ENST00000252599 KCNA4P22459 653 aa16.58■□□□□ 0.24
COLGALT1-201ENST00000252599 KIF7Q2M1P5 1343 aa16.58■□□□□ 0.24
COLGALT1-201ENST00000252599 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
COLGALT1-201ENST00000252599 PTPRKQ15262 1439 aa16.57■□□□□ 0.24
COLGALT1-201ENST00000252599 UACAQ9BZF9 1416 aa16.57■□□□□ 0.24
COLGALT1-201ENST00000252599 SSR1P43307 286 aaKnown RBP16.57■□□□□ 0.24
COLGALT1-201ENST00000252599 MCCP23508 829 aa16.57■□□□□ 0.24
COLGALT1-201ENST00000252599 DYNC1I1O14576 645 aa16.57■□□□□ 0.24
COLGALT1-201ENST00000252599 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
COLGALT1-201ENST00000252599 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
COLGALT1-201ENST00000252599 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
COLGALT1-201ENST00000252599 PRR29P0C7W0 189 aa16.56■□□□□ 0.24
COLGALT1-201ENST00000252599 ZSCAN20P17040 1043 aaPredicted RBP16.56■□□□□ 0.24
COLGALT1-201ENST00000252599 MYOM3Q5VTT5 1437 aa16.56■□□□□ 0.24
COLGALT1-201ENST00000252599 PCF11O94913 1555 aaKnown RBP16.56■□□□□ 0.24
COLGALT1-201ENST00000252599 CALRP27797 417 aaKnown RBP16.55■□□□□ 0.24
COLGALT1-201ENST00000252599 RIPK4P57078 832 aa16.55■□□□□ 0.24
COLGALT1-201ENST00000252599 CSPP1Q1MSJ5 1256 aa16.55■□□□□ 0.24
COLGALT1-201ENST00000252599 NEUROD2Q15784 382 aa16.55■□□□□ 0.24
COLGALT1-201ENST00000252599 MPHOSPH10O00566 681 aaKnown RBP16.54■□□□□ 0.24
COLGALT1-201ENST00000252599 OFD1O75665 1012 aa16.54■□□□□ 0.24
COLGALT1-201ENST00000252599 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
COLGALT1-201ENST00000252599 ANAPC15P60006 121 aa16.54■□□□□ 0.24
COLGALT1-201ENST00000252599 TSPYL1Q9H0U9 437 aa16.54■□□□□ 0.24
COLGALT1-201ENST00000252599 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
COLGALT1-201ENST00000252599 PLIN1O60240 522 aa16.53■□□□□ 0.24
COLGALT1-201ENST00000252599 TRAK2O60296 914 aa16.53■□□□□ 0.24
COLGALT1-201ENST00000252599 CALCOCO1Q9P1Z2 691 aa16.53■□□□□ 0.24
COLGALT1-201ENST00000252599 PDCL2Q8N4E4 241 aa16.53■□□□□ 0.24
COLGALT1-201ENST00000252599 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
COLGALT1-201ENST00000252599 MLECQ14165 292 aa16.52■□□□□ 0.23
COLGALT1-201ENST00000252599 GOLGA6L1Q8N7Z2 621 aa16.52■□□□□ 0.23
COLGALT1-201ENST00000252599 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.23
COLGALT1-201ENST00000252599 NAIPQ13075 1403 aa16.52■□□□□ 0.23
COLGALT1-201ENST00000252599 GGT6Q6P531 493 aa16.52■□□□□ 0.23
COLGALT1-201ENST00000252599 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
COLGALT1-201ENST00000252599 FAM177BA6PVY3 158 aa16.5■□□□□ 0.23
COLGALT1-201ENST00000252599 MYCBPQ99417 103 aaPredicted RBP16.5■□□□□ 0.23
COLGALT1-201ENST00000252599 CCDC7Q96M83 1385 aa16.5■□□□□ 0.23
COLGALT1-201ENST00000252599 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
COLGALT1-201ENST00000252599 PLCB2Q00722 1185 aa16.5■□□□□ 0.23
COLGALT1-201ENST00000252599 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
COLGALT1-201ENST00000252599 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
COLGALT1-201ENST00000252599 SKAP1Q86WV1 359 aa16.49■□□□□ 0.23
COLGALT1-201ENST00000252599 NASPP49321 788 aaPredicted RBP16.48■□□□□ 0.23
COLGALT1-201ENST00000252599 TSC1Q92574 1164 aa16.48■□□□□ 0.23
COLGALT1-201ENST00000252599 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
COLGALT1-201ENST00000252599 KIAA2012Q0VF49 1180 aa16.48■□□□□ 0.23
COLGALT1-201ENST00000252599 RSPH14Q9UHP6 348 aa16.47■□□□□ 0.23
COLGALT1-201ENST00000252599 GOLGA6L22H0YM25 854 aa16.47■□□□□ 0.23
COLGALT1-201ENST00000252599 MS4A1P11836 297 aa16.47■□□□□ 0.23
COLGALT1-201ENST00000252599 WDR43Q15061 677 aaKnown RBP eCLIP16.47■□□□□ 0.23
COLGALT1-201ENST00000252599 DEF6Q9H4E7 631 aa16.47■□□□□ 0.23
COLGALT1-201ENST00000252599 STK26Q9P289 416 aa16.46■□□□□ 0.23
COLGALT1-201ENST00000252599 HFM1A2PYH4 1435 aa16.46■□□□□ 0.23
COLGALT1-201ENST00000252599 EXOC6Q8TAG9 804 aa16.46■□□□□ 0.23
COLGALT1-201ENST00000252599 SASS6Q6UVJ0 657 aa16.45■□□□□ 0.22
COLGALT1-201ENST00000252599 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
COLGALT1-201ENST00000252599 FYCO1Q9BQS8 1478 aa16.45■□□□□ 0.22
COLGALT1-201ENST00000252599 ZNF513Q8N8E2 541 aaPredicted RBP16.45■□□□□ 0.22
COLGALT1-201ENST00000252599 AKNAQ7Z591 1439 aa16.45■□□□□ 0.22
COLGALT1-201ENST00000252599 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
COLGALT1-201ENST00000252599 USP47Q96K76 1375 aa16.44■□□□□ 0.22
COLGALT1-201ENST00000252599 SEMA3FQ13275 785 aa16.44■□□□□ 0.22
COLGALT1-201ENST00000252599 ZNF500O60304 480 aaPredicted RBP16.44■□□□□ 0.22
COLGALT1-201ENST00000252599 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
COLGALT1-201ENST00000252599 CDK13Q14004 1512 aaKnown RBP16.43■□□□□ 0.22
COLGALT1-201ENST00000252599 MRVI1Q9Y6F6 885 aa16.43■□□□□ 0.22
COLGALT1-201ENST00000252599 ZBED9Q6R2W3 1325 aa16.43■□□□□ 0.22
COLGALT1-201ENST00000252599 CARMIL2Q6F5E8 1435 aa16.42■□□□□ 0.22
COLGALT1-201ENST00000252599 KIF3BO15066 747 aa16.42■□□□□ 0.22
COLGALT1-201ENST00000252599 CCDC173Q0VFZ6 552 aa16.42■□□□□ 0.22
COLGALT1-201ENST00000252599 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
COLGALT1-201ENST00000252599 CALR3Q96L12 384 aaKnown RBP16.41■□□□□ 0.22
COLGALT1-201ENST00000252599 URB2Q14146 1524 aaKnown RBP16.41■□□□□ 0.22
COLGALT1-201ENST00000252599 RCAN3Q9UKA8 241 aa16.41■□□□□ 0.22
COLGALT1-201ENST00000252599 ROCK2O75116 1388 aaKnown RBP16.41■□□□□ 0.22
COLGALT1-201ENST00000252599 DRC1Q96MC2 740 aa16.41■□□□□ 0.22
COLGALT1-201ENST00000252599 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
COLGALT1-201ENST00000252599 CDCA7LQ96GN5 454 aa16.4■□□□□ 0.22
COLGALT1-201ENST00000252599 SMC4Q9NTJ3 1288 aa16.4■□□□□ 0.22
COLGALT1-201ENST00000252599 CNTLNQ9NXG0 1405 aa16.4■□□□□ 0.22
COLGALT1-201ENST00000252599 TMEM132AQ24JP5 1023 aa16.39■□□□□ 0.21
COLGALT1-201ENST00000252599 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
COLGALT1-201ENST00000252599 ARMCX6Q7L4S7 300 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms