RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.17
NIN-201ENST00000245441 DZIP1LQ8IYY4 767 aaKnown RBP14.01□□□□□ -0.17
NIN-201ENST00000245441 PES1O00541 588 aaKnown RBP14.01□□□□□ -0.17
NIN-201ENST00000245441 AKAP17AQ02040 695 aaKnown RBP14.01□□□□□ -0.17
NIN-201ENST00000245441 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
NIN-201ENST00000245441 MIA2Q96PC5 1412 aa14.01□□□□□ -0.17
NIN-201ENST00000245441 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
NIN-201ENST00000245441 TPM2P07951 284 aa14□□□□□ -0.17
NIN-201ENST00000245441 ERICH3Q5RHP9 1530 aa14□□□□□ -0.17
NIN-201ENST00000245441 SLC4A3P48751 1232 aa14□□□□□ -0.17
NIN-201ENST00000245441 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
NIN-201ENST00000245441 SETQ01105 290 aaPredicted RBP14□□□□□ -0.17
NIN-201ENST00000245441 FYCO1Q9BQS8 1478 aa14□□□□□ -0.17
NIN-201ENST00000245441 FRAT2O75474 233 aaPredicted RBP14□□□□□ -0.17
NIN-201ENST00000245441 C1orf141Q5JVX7 400 aa14□□□□□ -0.17
NIN-201ENST00000245441 LRRC9Q6ZRR7 1453 aa14□□□□□ -0.17
NIN-201ENST00000245441 CCDC7Q96M83 1385 aa14□□□□□ -0.17
NIN-201ENST00000245441 C9orf78Q9NZ63 289 aaPredicted RBP14□□□□□ -0.17
NIN-201ENST00000245441 LTV1Q96GA3 475 aaPredicted RBP13.99□□□□□ -0.17
NIN-201ENST00000245441 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
NIN-201ENST00000245441 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
NIN-201ENST00000245441 MCTP1Q6DN14 999 aa13.99□□□□□ -0.17
NIN-201ENST00000245441 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.99□□□□□ -0.17
NIN-201ENST00000245441 APAF1O14727 1248 aa13.99□□□□□ -0.17
NIN-201ENST00000245441 NUCB2P80303 420 aa13.99□□□□□ -0.17
NIN-201ENST00000245441 RNF20Q5VTR2 975 aa13.99□□□□□ -0.17
NIN-201ENST00000245441 GAPVD1Q14C86 1478 aa13.99□□□□□ -0.17
NIN-201ENST00000245441 API5Q9BZZ5 524 aaKnown RBP13.98□□□□□ -0.17
NIN-201ENST00000245441 IPO7O95373 1038 aaKnown RBP13.98□□□□□ -0.17
NIN-201ENST00000245441 TEFQ10587 303 aa13.98□□□□□ -0.17
NIN-201ENST00000245441 FOXD4L6Q3SYB3 417 aaPredicted RBP13.98□□□□□ -0.17
NIN-201ENST00000245441 FOXD4L3Q6VB84 417 aaPredicted RBP13.98□□□□□ -0.17
NIN-201ENST00000245441 BRD4O60885 1362 aaPredicted RBP13.98□□□□□ -0.17
NIN-201ENST00000245441 INTS3Q68E01 1043 aaKnown RBP13.97□□□□□ -0.17
NIN-201ENST00000245441 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
NIN-201ENST00000245441 CCAR2Q8N163 923 aaKnown RBP13.97□□□□□ -0.17
NIN-201ENST00000245441 SYNE3Q6ZMZ3 975 aa13.97□□□□□ -0.17
NIN-201ENST00000245441 RUNDC1Q96C34 613 aa13.97□□□□□ -0.17
NIN-201ENST00000245441 ANKRD20A12PQ8NF67 263 aa13.97□□□□□ -0.17
NIN-201ENST00000245441 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
NIN-201ENST00000245441 ELL2O00472 640 aaPredicted RBP13.97□□□□□ -0.17
NIN-201ENST00000245441 MARCH6O60337 910 aa13.96□□□□□ -0.17
NIN-201ENST00000245441 GTF2E1P29083 439 aaPredicted RBP13.96□□□□□ -0.17
NIN-201ENST00000245441 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
NIN-201ENST00000245441 TRIM29Q14134 588 aa13.95□□□□□ -0.18
NIN-201ENST00000245441 G3V3G9 751 aa13.95□□□□□ -0.18
NIN-201ENST00000245441 DCAF8Q5TAQ9 597 aa13.95□□□□□ -0.18
NIN-201ENST00000245441 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
NIN-201ENST00000245441 RIPK4P57078 832 aa13.94□□□□□ -0.18
NIN-201ENST00000245441 TEX35Q5T0J7 233 aa13.94□□□□□ -0.18
NIN-201ENST00000245441 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
NIN-201ENST00000245441 CPLX1O14810 134 aa13.94□□□□□ -0.18
NIN-201ENST00000245441 IFIT2P09913 472 aaKnown RBP13.94□□□□□ -0.18
NIN-201ENST00000245441 C22orf23Q9BZE7 217 aa13.94□□□□□ -0.18
NIN-201ENST00000245441 VPS53Q5VIR6 699 aa13.94□□□□□ -0.18
NIN-201ENST00000245441 FAM43AQ8N2R8 423 aa13.94□□□□□ -0.18
NIN-201ENST00000245441 PTPRGP23470 1445 aa13.93□□□□□ -0.18
NIN-201ENST00000245441 TTC5Q8N0Z6 440 aa13.93□□□□□ -0.18
NIN-201ENST00000245441 ANO2Q9NQ90 1003 aa13.93□□□□□ -0.18
NIN-201ENST00000245441 NUTM2FA1L443 756 aa13.93□□□□□ -0.18
NIN-201ENST00000245441 DDX58O95786 925 aaKnown RBP13.93□□□□□ -0.18
NIN-201ENST00000245441 ZNF592Q92610 1267 aa13.92□□□□□ -0.18
NIN-201ENST00000245441 BICD2Q8TD16 824 aa13.92□□□□□ -0.18
NIN-201ENST00000245441 ERC2O15083 957 aa13.92□□□□□ -0.18
NIN-201ENST00000245441 TRDNQ13061 729 aa13.92□□□□□ -0.18
NIN-201ENST00000245441 GNAI1P63096 354 aa13.91□□□□□ -0.18
NIN-201ENST00000245441 AMOTL1Q8IY63 956 aa13.91□□□□□ -0.18
NIN-201ENST00000245441 ZNF771Q7L3S4 317 aaPredicted RBP13.91□□□□□ -0.18
NIN-201ENST00000245441 CASKIN1Q8WXD9 1431 aa13.91□□□□□ -0.18
NIN-201ENST00000245441 HOMER1Q86YM7 354 aa13.91□□□□□ -0.18
NIN-201ENST00000245441 HSP90AB4PQ58FF6 505 aa13.91□□□□□ -0.18
NIN-201ENST00000245441 MINK1Q8N4C8 1332 aaPredicted RBP13.91□□□□□ -0.18
NIN-201ENST00000245441 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
NIN-201ENST00000245441 SMC3Q9UQE7 1217 aa13.9□□□□□ -0.18
NIN-201ENST00000245441 EFCAB5A4FU69 1503 aa13.9□□□□□ -0.18
NIN-201ENST00000245441 NASPP49321 788 aaPredicted RBP13.9□□□□□ -0.18
NIN-201ENST00000245441 NCOA2Q15596 1464 aa13.9□□□□□ -0.18
NIN-201ENST00000245441 FKBP5Q13451 457 aaPredicted RBP13.9□□□□□ -0.18
NIN-201ENST00000245441 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
NIN-201ENST00000245441 NAT10Q9H0A0 1025 aaKnown RBP13.9□□□□□ -0.18
NIN-201ENST00000245441 NINLQ9Y2I6 1382 aa13.9□□□□□ -0.18
NIN-201ENST00000245441 HECW1Q76N89 1606 aa13.9□□□□□ -0.19
NIN-201ENST00000245441 FAM13BQ9NYF5 915 aa13.89□□□□□ -0.19
NIN-201ENST00000245441 ANKRD50Q9ULJ7 1429 aa13.89□□□□□ -0.19
NIN-201ENST00000245441 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
NIN-201ENST00000245441 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
NIN-201ENST00000245441 PDE4CQ08493 712 aa13.89□□□□□ -0.19
NIN-201ENST00000245441 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
NIN-201ENST00000245441 EHBP1L1Q8N3D4 1523 aa13.88□□□□□ -0.19
NIN-201ENST00000245441 VSIG10Q8N0Z9 540 aa13.88□□□□□ -0.19
NIN-201ENST00000245441 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
NIN-201ENST00000245441 VPS37CA5D8V6 355 aaPredicted RBP13.88□□□□□ -0.19
NIN-201ENST00000245441 MRE11P49959 708 aa13.88□□□□□ -0.19
NIN-201ENST00000245441 SCAPERQ9BY12 1400 aa13.88□□□□□ -0.19
NIN-201ENST00000245441 ARHGAP5Q13017 1502 aa13.88□□□□□ -0.19
NIN-201ENST00000245441 NOL10Q9BSC4 688 aaKnown RBP13.88□□□□□ -0.19
NIN-201ENST00000245441 CCDC73Q6ZRK6 1079 aa13.87□□□□□ -0.19
NIN-201ENST00000245441 LNPKQ9C0E8 428 aa13.87□□□□□ -0.19
NIN-201ENST00000245441 APPP05067 770 aa13.87□□□□□ -0.19
NIN-201ENST00000245441 ARGLU1Q9NWB6 273 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms