RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 NGDNQ8NEJ9 315 aaKnown RBP7.36□□□□□ -1.23
RUFY3-201ENST00000226328 PTPRKQ15262 1439 aa7.36□□□□□ -1.23
RUFY3-201ENST00000226328 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
RUFY3-201ENST00000226328 SAFB2Q14151 953 aaKnown RBP eCLIP7.35□□□□□ -1.23
RUFY3-201ENST00000226328 CLTCQ00610 1675 aaKnown RBP7.35□□□□□ -1.23
RUFY3-201ENST00000226328 UNC13BO14795 1591 aa7.35□□□□□ -1.23
RUFY3-201ENST00000226328 PSME1Q06323 249 aa7.35□□□□□ -1.23
RUFY3-201ENST00000226328 TBX22Q9Y458 520 aa7.35□□□□□ -1.23
RUFY3-201ENST00000226328 SETD1BQ9UPS6 1966 aaKnown RBP7.34□□□□□ -1.23
RUFY3-201ENST00000226328 KCNA6P17658 529 aa7.34□□□□□ -1.23
RUFY3-201ENST00000226328 CCDC9Q9Y3X0 531 aaKnown RBP7.34□□□□□ -1.23
RUFY3-201ENST00000226328 LMTK2Q8IWU2 1503 aa7.34□□□□□ -1.23
RUFY3-201ENST00000226328 ZNF142P52746 1687 aaPredicted RBP7.34□□□□□ -1.23
RUFY3-201ENST00000226328 GCC2Q8IWJ2 1684 aa7.34□□□□□ -1.23
RUFY3-201ENST00000226328 EIF3AQ14152 1382 aaKnown RBP7.34□□□□□ -1.23
RUFY3-201ENST00000226328 ZBTB7CA1YPR0 619 aa7.34□□□□□ -1.23
RUFY3-201ENST00000226328 FBXO41Q8TF61 875 aa7.34□□□□□ -1.23
RUFY3-201ENST00000226328 A2ML1A8K2U0 1454 aa7.34□□□□□ -1.23
RUFY3-201ENST00000226328 NPHP4O75161 1426 aaPredicted RBP7.34□□□□□ -1.24
RUFY3-201ENST00000226328 PAK3O75914 559 aaPredicted RBP7.34□□□□□ -1.24
RUFY3-201ENST00000226328 CARD11Q9BXL7 1154 aa7.34□□□□□ -1.24
RUFY3-201ENST00000226328 PREX1Q8TCU6 1659 aa7.33□□□□□ -1.24
RUFY3-201ENST00000226328 RIMS2Q9UQ26 1411 aa7.33□□□□□ -1.24
RUFY3-201ENST00000226328 TMC1Q8TDI8 760 aa7.33□□□□□ -1.24
RUFY3-201ENST00000226328 AMOTL2Q9Y2J4 779 aa7.33□□□□□ -1.24
RUFY3-201ENST00000226328 PZPP20742 1482 aa7.33□□□□□ -1.24
RUFY3-201ENST00000226328 TMEM2Q9UHN6 1383 aa7.32□□□□□ -1.24
RUFY3-201ENST00000226328 ABCC3O15438 1527 aa7.32□□□□□ -1.24
RUFY3-201ENST00000226328 CAMSAP1Q5T5Y3 1602 aa7.32□□□□□ -1.24
RUFY3-201ENST00000226328 UGGT1Q9NYU2 1555 aa7.32□□□□□ -1.24
RUFY3-201ENST00000226328 TPRNQ4KMQ1 711 aa7.32□□□□□ -1.24
RUFY3-201ENST00000226328 C19orf44Q9H6X5 657 aa7.32□□□□□ -1.24
RUFY3-201ENST00000226328 RPRD2Q5VT52 1461 aaKnown RBP7.32□□□□□ -1.24
RUFY3-201ENST00000226328 TRAK1Q9UPV9 953 aa7.32□□□□□ -1.24
RUFY3-201ENST00000226328 NEFMP07197 916 aa7.31□□□□□ -1.24
RUFY3-201ENST00000226328 CEP152O94986 1710 aa7.31□□□□□ -1.24
RUFY3-201ENST00000226328 MYO3AQ8NEV4 1616 aa7.31□□□□□ -1.24
RUFY3-201ENST00000226328 NAIPQ13075 1403 aa7.31□□□□□ -1.24
RUFY3-201ENST00000226328 LRPPRCP42704 1394 aaKnown RBP7.31□□□□□ -1.24
RUFY3-201ENST00000226328 GPRASP1Q5JY77 1395 aa7.31□□□□□ -1.24
RUFY3-201ENST00000226328 NUTM2FA1L443 756 aa7.31□□□□□ -1.24
RUFY3-201ENST00000226328 ESCO1Q5FWF5 840 aa7.31□□□□□ -1.24
RUFY3-201ENST00000226328 HDGFL2Q7Z4V5 671 aaPredicted RBP7.31□□□□□ -1.24
RUFY3-201ENST00000226328 IQGAP3Q86VI3 1631 aa7.3□□□□□ -1.24
RUFY3-201ENST00000226328 ARHGAP31Q2M1Z3 1444 aa7.3□□□□□ -1.24
RUFY3-201ENST00000226328 SPATA31D1Q6ZQQ2 1576 aa7.3□□□□□ -1.24
RUFY3-201ENST00000226328 TIMELESSQ9UNS1 1208 aa7.3□□□□□ -1.24
RUFY3-201ENST00000226328 SCAF11Q99590 1463 aaKnown RBP7.3□□□□□ -1.24
RUFY3-201ENST00000226328 ERVK-7P63135 1459 aa7.29□□□□□ -1.24
RUFY3-201ENST00000226328 ZNF335Q9H4Z2 1342 aaPredicted RBP7.29□□□□□ -1.24
RUFY3-201ENST00000226328 CLSPNQ9HAW4 1339 aa7.29□□□□□ -1.24
RUFY3-201ENST00000226328 NUTM2BA6NNL0 878 aaPredicted RBP7.29□□□□□ -1.24
RUFY3-201ENST00000226328 NUTM2EB1AL46 878 aaPredicted RBP7.29□□□□□ -1.24
RUFY3-201ENST00000226328 NUTM2AQ8IVF1 878 aaPredicted RBP7.29□□□□□ -1.24
RUFY3-201ENST00000226328 PTPRTO14522 1441 aa7.28□□□□□ -1.24
RUFY3-201ENST00000226328 TET3O43151 1660 aa7.28□□□□□ -1.24
RUFY3-201ENST00000226328 KDM5AP29375 1690 aaKnown RBP7.28□□□□□ -1.24
RUFY3-201ENST00000226328 EFCAB6Q5THR3 1501 aa7.28□□□□□ -1.24
RUFY3-201ENST00000226328 ROCK2O75116 1388 aaKnown RBP7.28□□□□□ -1.24
RUFY3-201ENST00000226328 TMF1P82094 1093 aa7.27□□□□□ -1.25
RUFY3-201ENST00000226328 EVC2Q86UK5 1308 aa7.27□□□□□ -1.25
RUFY3-201ENST00000226328 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.25
RUFY3-201ENST00000226328 TERF2IPQ9NYB0 399 aa7.27□□□□□ -1.25
RUFY3-201ENST00000226328 CSB-PGBD3P0DP91 1061 aa7.27□□□□□ -1.25
RUFY3-201ENST00000226328 EVA1CP58658 441 aa7.26□□□□□ -1.25
RUFY3-201ENST00000226328 EIF4G2P78344 907 aaKnown RBP eCLIP7.26□□□□□ -1.25
RUFY3-201ENST00000226328 PIK3C2BO00750 1634 aa7.26□□□□□ -1.25
RUFY3-201ENST00000226328 SF3B2Q13435 895 aaKnown RBP7.26□□□□□ -1.25
RUFY3-201ENST00000226328 TMEM132EQ6IEE7 984 aa7.26□□□□□ -1.25
RUFY3-201ENST00000226328 LRRC59Q96AG4 307 aaKnown RBP7.26□□□□□ -1.25
RUFY3-201ENST00000226328 LTKP29376 864 aa7.26□□□□□ -1.25
RUFY3-201ENST00000226328 STRCQ7RTU9 1775 aa7.26□□□□□ -1.25
RUFY3-201ENST00000226328 CFAP70Q5T0N1 1121 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 NPHP3Q7Z494 1330 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 PIK3R4Q99570 1358 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 PLEKHG1Q9ULL1 1385 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 SIN3AQ96ST3 1273 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 SYNMO15061 1565 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 E9PCH4 1651 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 PLA2R1Q13018 1463 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 PODXL2Q9NZ53 605 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 SLAIN2Q9P270 581 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 CEP170BQ9Y4F5 1589 aaPredicted RBP7.25□□□□□ -1.25
RUFY3-201ENST00000226328 NGLY1Q96IV0 654 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 PRAM1Q96QH2 718 aa7.25□□□□□ -1.25
RUFY3-201ENST00000226328 CENPJQ9HC77 1338 aaPredicted RBP7.25□□□□□ -1.25
RUFY3-201ENST00000226328 L3MBTL2Q969R5 705 aa7.24□□□□□ -1.25
RUFY3-201ENST00000226328 TMEM94Q12767 1356 aa7.24□□□□□ -1.25
RUFY3-201ENST00000226328 RBM33Q96EV2 1170 aaKnown RBP7.24□□□□□ -1.25
RUFY3-201ENST00000226328 CNGB1Q14028 1251 aaPredicted RBP7.23□□□□□ -1.25
RUFY3-201ENST00000226328 UBR1Q8IWV7 1749 aa7.23□□□□□ -1.25
RUFY3-201ENST00000226328 NOS1P29475 1434 aa7.23□□□□□ -1.25
RUFY3-201ENST00000226328 DISP3Q9P2K9 1392 aa7.23□□□□□ -1.25
RUFY3-201ENST00000226328 HIRIP3Q9BW71 556 aaPredicted RBP7.23□□□□□ -1.25
RUFY3-201ENST00000226328 PHF8Q9UPP1 1060 aa7.22□□□□□ -1.25
RUFY3-201ENST00000226328 POLR1AO95602 1720 aaPredicted RBP7.21□□□□□ -1.25
RUFY3-201ENST00000226328 NPM2Q86SE8 214 aaKnown RBP7.21□□□□□ -1.26
RUFY3-201ENST00000226328 NEURL4Q96JN8 1562 aa7.21□□□□□ -1.26
RUFY3-201ENST00000226328 SOX12O15370 315 aa7.21□□□□□ -1.26
RUFY3-201ENST00000226328 NLRP13Q86W25 1043 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms