RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 DCAF11Q8TEB1 546 aa21.27■□□□□ 0.99
SF3A2-201ENST00000221494 ABCC3O15438 1527 aa21.26■□□□□ 0.99
SF3A2-201ENST00000221494 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
SF3A2-201ENST00000221494 TRHP20396 242 aaPredicted RBP21.25■□□□□ 0.99
SF3A2-201ENST00000221494 RALBP1Q15311 655 aa21.25■□□□□ 0.99
SF3A2-201ENST00000221494 RGL3Q3MIN7 710 aa21.25■□□□□ 0.99
SF3A2-201ENST00000221494 REREQ9P2R6 1566 aa21.25■□□□□ 0.99
SF3A2-201ENST00000221494 PAK3O75914 559 aaPredicted RBP21.25■□□□□ 0.99
SF3A2-201ENST00000221494 TCERG1O14776 1098 aaKnown RBP21.24■□□□□ 0.99
SF3A2-201ENST00000221494 RTL5Q5HYW3 569 aaPredicted RBP21.24■□□□□ 0.99
SF3A2-201ENST00000221494 NPATQ14207 1427 aa21.24■□□□□ 0.99
SF3A2-201ENST00000221494 PDE3BQ13370 1112 aa21.23■□□□□ 0.99
SF3A2-201ENST00000221494 KDM2AQ9Y2K7 1162 aa21.23■□□□□ 0.99
SF3A2-201ENST00000221494 MYBBP1AQ9BQG0 1328 aaKnown RBP21.23■□□□□ 0.99
SF3A2-201ENST00000221494 AGLP35573 1532 aa21.22■□□□□ 0.99
SF3A2-201ENST00000221494 TMC1Q8TDI8 760 aa21.22■□□□□ 0.99
SF3A2-201ENST00000221494 MS4A1P11836 297 aa21.21■□□□□ 0.99
SF3A2-201ENST00000221494 ZNF326Q5BKZ1 582 aaKnown RBP21.21■□□□□ 0.99
SF3A2-201ENST00000221494 CEP152O94986 1710 aa21.21■□□□□ 0.99
SF3A2-201ENST00000221494 SPHKAPQ2M3C7 1700 aa21.21■□□□□ 0.99
SF3A2-201ENST00000221494 USP35Q9P2H5 1018 aa21.19■□□□□ 0.98
SF3A2-201ENST00000221494 ARHGEF40Q8TER5 1519 aa21.19■□□□□ 0.98
SF3A2-201ENST00000221494 CLTCL1P53675 1640 aa21.18■□□□□ 0.98
SF3A2-201ENST00000221494 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
SF3A2-201ENST00000221494 LAMC1P11047 1609 aa21.17■□□□□ 0.98
SF3A2-201ENST00000221494 RRP1P56182 461 aaKnown RBP21.17■□□□□ 0.98
SF3A2-201ENST00000221494 PPP6R1Q9UPN7 881 aa21.17■□□□□ 0.98
SF3A2-201ENST00000221494 PRAG1Q86YV5 1406 aa21.15■□□□□ 0.98
SF3A2-201ENST00000221494 UGGT1Q9NYU2 1555 aa21.14■□□□□ 0.98
SF3A2-201ENST00000221494 NOS1P29475 1434 aa21.14■□□□□ 0.97
SF3A2-201ENST00000221494 NBR1Q14596 966 aa21.14■□□□□ 0.97
SF3A2-201ENST00000221494 CAMSAP1Q5T5Y3 1602 aa21.13■□□□□ 0.97
SF3A2-201ENST00000221494 SIGLEC1Q9BZZ2 1709 aa21.13■□□□□ 0.97
SF3A2-201ENST00000221494 ZC3H13Q5T200 1668 aaKnown RBP21.12■□□□□ 0.97
SF3A2-201ENST00000221494 PARD3Q8TEW0 1356 aa21.11■□□□□ 0.97
SF3A2-201ENST00000221494 NEURL4Q96JN8 1562 aa21.11■□□□□ 0.97
SF3A2-201ENST00000221494 STAC3Q96MF2 364 aa21.1■□□□□ 0.97
SF3A2-201ENST00000221494 TRPM1Q7Z4N2 1603 aa21.1■□□□□ 0.97
SF3A2-201ENST00000221494 NLRP13Q86W25 1043 aa21.09■□□□□ 0.97
SF3A2-201ENST00000221494 CARD11Q9BXL7 1154 aa21.09■□□□□ 0.97
SF3A2-201ENST00000221494 RCAN3Q9UKA8 241 aa21.09■□□□□ 0.97
SF3A2-201ENST00000221494 MLECQ14165 292 aa21.08■□□□□ 0.97
SF3A2-201ENST00000221494 PPM1GO15355 546 aaPredicted RBP21.06■□□□□ 0.96
SF3A2-201ENST00000221494 NBPF1Q3BBV0 1214 aa21.05■□□□□ 0.96
SF3A2-201ENST00000221494 BACH2Q9BYV9 841 aa21.05■□□□□ 0.96
SF3A2-201ENST00000221494 BLMP54132 1417 aaPredicted RBP21.05■□□□□ 0.96
SF3A2-201ENST00000221494 UBE2Q2Q8WVN8 375 aa21.04■□□□□ 0.96
SF3A2-201ENST00000221494 GPRASP1Q5JY77 1395 aa21.04■□□□□ 0.96
SF3A2-201ENST00000221494 SYNMO15061 1565 aa21.03■□□□□ 0.96
SF3A2-201ENST00000221494 FBXO31Q5XUX0 539 aaPredicted RBP21.03■□□□□ 0.96
SF3A2-201ENST00000221494 SLC52A1Q9NWF4 448 aa21.03■□□□□ 0.96
SF3A2-201ENST00000221494 ADGRB3O60242 1522 aa21.03■□□□□ 0.96
SF3A2-201ENST00000221494 PDE4AP27815 886 aa21.03■□□□□ 0.96
SF3A2-201ENST00000221494 DDRGK1Q96HY6 314 aa21.03■□□□□ 0.96
SF3A2-201ENST00000221494 IDI1Q13907 227 aa21.02■□□□□ 0.96
SF3A2-201ENST00000221494 CHGAP10645 457 aaKnown RBP21.01■□□□□ 0.95
SF3A2-201ENST00000221494 POLR3GLQ9BT43 218 aa21.01■□□□□ 0.95
SF3A2-201ENST00000221494 EXOC6Q8TAG9 804 aa21■□□□□ 0.95
SF3A2-201ENST00000221494 PIK3C2BO00750 1634 aa21■□□□□ 0.95
SF3A2-201ENST00000221494 ERVK-7P63135 1459 aa20.99■□□□□ 0.95
SF3A2-201ENST00000221494 ST20-MTHFSA0A0A6YYL1 179 aa20.99■□□□□ 0.95
SF3A2-201ENST00000221494 CFAP65Q6ZU64 1925 aaKnown RBP20.98■□□□□ 0.95
SF3A2-201ENST00000221494 MYOM2P54296 1465 aa20.98■□□□□ 0.95
SF3A2-201ENST00000221494 MADDQ8WXG6 1647 aa20.98■□□□□ 0.95
SF3A2-201ENST00000221494 KIF1BO60333 1816 aa20.97■□□□□ 0.95
SF3A2-201ENST00000221494 ADGRF5Q8IZF2 1346 aa20.97■□□□□ 0.95
SF3A2-201ENST00000221494 RPGRIP1LQ68CZ1 1315 aa20.97■□□□□ 0.95
SF3A2-201ENST00000221494 ZMYM3Q14202 1370 aa20.96■□□□□ 0.95
SF3A2-201ENST00000221494 MROH2AA6NES4 1674 aa20.96■□□□□ 0.95
SF3A2-201ENST00000221494 ESF1Q9H501 851 aaKnown RBP20.96■□□□□ 0.95
SF3A2-201ENST00000221494 CLTCQ00610 1675 aaKnown RBP20.96■□□□□ 0.95
SF3A2-201ENST00000221494 PREX1Q8TCU6 1659 aa20.96■□□□□ 0.95
SF3A2-201ENST00000221494 NRXN1Q9ULB1 1477 aa20.94■□□□□ 0.94
SF3A2-201ENST00000221494 PER1O15534 1290 aaPredicted RBP20.91■□□□□ 0.94
SF3A2-201ENST00000221494 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
SF3A2-201ENST00000221494 CFAP70Q5T0N1 1121 aa20.9■□□□□ 0.94
SF3A2-201ENST00000221494 IFT172Q9UG01 1749 aa20.89■□□□□ 0.94
SF3A2-201ENST00000221494 NEFMP07197 916 aa20.89■□□□□ 0.93
SF3A2-201ENST00000221494 PLEKHG5O94827 1062 aa20.88■□□□□ 0.93
SF3A2-201ENST00000221494 VGFO15240 615 aaPredicted RBP20.86■□□□□ 0.93
SF3A2-201ENST00000221494 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
SF3A2-201ENST00000221494 PIK3C2GO75747 1445 aa20.86■□□□□ 0.93
SF3A2-201ENST00000221494 NEXMIFQ5QGS0 1516 aa20.86■□□□□ 0.93
SF3A2-201ENST00000221494 C14orf93Q9H972 538 aaKnown RBP20.85■□□□□ 0.93
SF3A2-201ENST00000221494 NPM2Q86SE8 214 aaKnown RBP20.85■□□□□ 0.93
SF3A2-201ENST00000221494 TESK2Q96S53 571 aa20.85■□□□□ 0.93
SF3A2-201ENST00000221494 ZFYVE9O95405 1425 aa20.84■□□□□ 0.93
SF3A2-201ENST00000221494 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
SF3A2-201ENST00000221494 PPLO60437 1756 aa20.83■□□□□ 0.93
SF3A2-201ENST00000221494 KIAA1210Q9ULL0 1709 aa20.83■□□□□ 0.93
SF3A2-201ENST00000221494 NUTM2DQ5VT03 806 aaPredicted RBP20.83■□□□□ 0.93
SF3A2-201ENST00000221494 SCAF11Q99590 1463 aaKnown RBP20.83■□□□□ 0.92
SF3A2-201ENST00000221494 CENPQQ7L2Z9 268 aaPredicted RBP20.82■□□□□ 0.92
SF3A2-201ENST00000221494 KDM2BQ8NHM5 1336 aa20.82■□□□□ 0.92
SF3A2-201ENST00000221494 STAG3Q9UJ98 1225 aa20.81■□□□□ 0.92
SF3A2-201ENST00000221494 TNRQ92752 1358 aa20.81■□□□□ 0.92
SF3A2-201ENST00000221494 A2ML1A8K2U0 1454 aa20.8■□□□□ 0.92
SF3A2-201ENST00000221494 VIRMAQ69YN4 1812 aaKnown RBP20.8■□□□□ 0.92
SF3A2-201ENST00000221494 CEBPAP49715 358 aaPredicted RBP20.79■□□□□ 0.92
SF3A2-201ENST00000221494 EIF3AQ14152 1382 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms