RNA–Protein interactions for RNA: ENST00000202028.9

EPB41L1-201, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 1 (best) BASIC

Gene EPB41L1, Length 3,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-201ENST00000202028 RGL3Q3MIN7 710 aa11.39□□□□□ -0.59
EPB41L1-201ENST00000202028 KANK1Q14678 1352 aa11.39□□□□□ -0.59
EPB41L1-201ENST00000202028 COL17A1Q9UMD9 1497 aaPredicted RBP11.38□□□□□ -0.59
EPB41L1-201ENST00000202028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.38□□□□□ -0.595e-7■■□□□ 12.1
EPB41L1-201ENST00000202028 PPLO60437 1756 aa11.38□□□□□ -0.59
EPB41L1-201ENST00000202028 ADGRB3O60242 1522 aa11.38□□□□□ -0.59
EPB41L1-201ENST00000202028 YEATS2Q9ULM3 1422 aa11.37□□□□□ -0.59
EPB41L1-201ENST00000202028 DCAF11Q8TEB1 546 aa11.37□□□□□ -0.59
EPB41L1-201ENST00000202028 NOS1P29475 1434 aa11.37□□□□□ -0.59
EPB41L1-201ENST00000202028 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
EPB41L1-201ENST00000202028 SPATA31D1Q6ZQQ2 1576 aa11.36□□□□□ -0.59
EPB41L1-201ENST00000202028 FANCIQ9NVI1 1328 aa11.36□□□□□ -0.59
EPB41L1-201ENST00000202028 MADDQ8WXG6 1647 aa11.36□□□□□ -0.59
EPB41L1-201ENST00000202028 USP47Q96K76 1375 aa11.36□□□□□ -0.59
EPB41L1-201ENST00000202028 RALGAPBQ86X10 1494 aa11.36□□□□□ -0.59
EPB41L1-201ENST00000202028 SYNMO15061 1565 aa11.36□□□□□ -0.59
EPB41L1-201ENST00000202028 MYOM2P54296 1465 aa11.35□□□□□ -0.59
EPB41L1-201ENST00000202028 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
EPB41L1-201ENST00000202028 CLTCQ00610 1675 aaKnown RBP11.34□□□□□ -0.59
EPB41L1-201ENST00000202028 NRXN1Q9ULB1 1477 aa11.34□□□□□ -0.59
EPB41L1-201ENST00000202028 ANP32AP39687 249 aaKnown RBP11.34□□□□□ -0.59
EPB41L1-201ENST00000202028 ERICH6BQ5W0A0 696 aa11.34□□□□□ -0.59
EPB41L1-201ENST00000202028 NUDCQ9Y266 331 aa11.34□□□□□ -0.59
EPB41L1-201ENST00000202028 ST20-MTHFSA0A0A6YYL1 179 aa11.34□□□□□ -0.59
EPB41L1-201ENST00000202028 CCDC144AA2RUR9 1427 aa11.33□□□□□ -0.6
EPB41L1-201ENST00000202028 IQGAP1P46940 1657 aa11.32□□□□□ -0.6
EPB41L1-201ENST00000202028 NPATQ14207 1427 aa11.32□□□□□ -0.6
EPB41L1-201ENST00000202028 NOP58Q9Y2X3 529 aaKnown RBP11.31□□□□□ -0.6
EPB41L1-201ENST00000202028 CC2D1BQ5T0F9 858 aaKnown RBP11.31□□□□□ -0.6
EPB41L1-201ENST00000202028 SETBP1Q9Y6X0 1596 aa11.3□□□□□ -0.6
EPB41L1-201ENST00000202028 TMEM131LA2VDJ0 1609 aa11.3□□□□□ -0.6
EPB41L1-201ENST00000202028 PRKCSHP14314 528 aaPredicted RBP11.3□□□□□ -0.6
EPB41L1-201ENST00000202028 GPRASP1Q5JY77 1395 aa11.3□□□□□ -0.6
EPB41L1-201ENST00000202028 PAK3O75914 559 aaPredicted RBP11.3□□□□□ -0.6
EPB41L1-201ENST00000202028 RTL5Q5HYW3 569 aaPredicted RBP11.3□□□□□ -0.6
EPB41L1-201ENST00000202028 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
EPB41L1-201ENST00000202028 FER1L4A9Z1Z3 1794 aa11.29□□□□□ -0.6
EPB41L1-201ENST00000202028 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
EPB41L1-201ENST00000202028 UGGT1Q9NYU2 1555 aa11.29□□□□□ -0.6
EPB41L1-201ENST00000202028 RAPGEF3O95398 923 aa11.28□□□□□ -0.6
EPB41L1-201ENST00000202028 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
EPB41L1-201ENST00000202028 PRAG1Q86YV5 1406 aa11.28□□□□□ -0.6
EPB41L1-201ENST00000202028 MYO5BQ9ULV0 1848 aa11.28□□□□□ -0.6
EPB41L1-201ENST00000202028 ERVK-7P63135 1459 aa11.27□□□□□ -0.61
EPB41L1-201ENST00000202028 ZFYVE9O95405 1425 aa11.27□□□□□ -0.61
EPB41L1-201ENST00000202028 KIF3BO15066 747 aa11.26□□□□□ -0.61
EPB41L1-201ENST00000202028 EXOC6Q8TAG9 804 aa11.26□□□□□ -0.61
EPB41L1-201ENST00000202028 ADAMTSL3P82987 1691 aa11.26□□□□□ -0.61
EPB41L1-201ENST00000202028 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
EPB41L1-201ENST00000202028 C3P01024 1663 aa11.25□□□□□ -0.61
EPB41L1-201ENST00000202028 NEXMIFQ5QGS0 1516 aa11.25□□□□□ -0.61
EPB41L1-201ENST00000202028 ROCK2O75116 1388 aaKnown RBP11.25□□□□□ -0.61
EPB41L1-201ENST00000202028 PLIN1O60240 522 aa11.25□□□□□ -0.61
EPB41L1-201ENST00000202028 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
EPB41L1-201ENST00000202028 ZNF142P52746 1687 aaPredicted RBP11.24□□□□□ -0.61
EPB41L1-201ENST00000202028 SETD1AO15047 1707 aaKnown RBP11.24□□□□□ -0.61
EPB41L1-201ENST00000202028 LAS1LQ9Y4W2 734 aaKnown RBP11.23□□□□□ -0.61
EPB41L1-201ENST00000202028 RCAN3Q9UKA8 241 aa11.23□□□□□ -0.61
EPB41L1-201ENST00000202028 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
EPB41L1-201ENST00000202028 UBR1Q8IWV7 1749 aa11.22□□□□□ -0.61
EPB41L1-201ENST00000202028 NBPF1Q3BBV0 1214 aa11.22□□□□□ -0.61
EPB41L1-201ENST00000202028 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
EPB41L1-201ENST00000202028 RPGRIP1LQ68CZ1 1315 aa11.21□□□□□ -0.61
EPB41L1-201ENST00000202028 MYBBP1AQ9BQG0 1328 aaKnown RBP11.21□□□□□ -0.61
EPB41L1-201ENST00000202028 SKAP1Q86WV1 359 aa11.21□□□□□ -0.62
EPB41L1-201ENST00000202028 RRP1P56182 461 aaKnown RBP11.2□□□□□ -0.62
EPB41L1-201ENST00000202028 IPO9Q96P70 1041 aaKnown RBP11.2□□□□□ -0.62
EPB41L1-201ENST00000202028 KNDC1Q76NI1 1749 aa11.2□□□□□ -0.62
EPB41L1-201ENST00000202028 RALBP1Q15311 655 aa11.19□□□□□ -0.62
EPB41L1-201ENST00000202028 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
EPB41L1-201ENST00000202028 ARID4BQ4LE39 1312 aaPredicted RBP11.18□□□□□ -0.62
EPB41L1-201ENST00000202028 KTN1Q86UP2 1357 aaKnown RBP11.18□□□□□ -0.62
EPB41L1-201ENST00000202028 PIK3C2GO75747 1445 aa11.18□□□□□ -0.62
EPB41L1-201ENST00000202028 NLRP1Q9C000 1473 aa11.18□□□□□ -0.62
EPB41L1-201ENST00000202028 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
EPB41L1-201ENST00000202028 ADGRB1O14514 1584 aa11.17□□□□□ -0.62
EPB41L1-201ENST00000202028 SLC52A1Q9NWF4 448 aa11.17□□□□□ -0.62
EPB41L1-201ENST00000202028 PANK3Q9H999 370 aa11.17□□□□□ -0.62
EPB41L1-201ENST00000202028 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
EPB41L1-201ENST00000202028 WASHC2CQ9Y4E1 1318 aa11.16□□□□□ -0.62
EPB41L1-201ENST00000202028 ARHGEF28Q8N1W1 1705 aaKnown RBP11.16□□□□□ -0.62
EPB41L1-201ENST00000202028 NRXN3Q9Y4C0 1643 aa11.15□□□□□ -0.62
EPB41L1-201ENST00000202028 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
EPB41L1-201ENST00000202028 SLIT1O75093 1534 aa11.14□□□□□ -0.63
EPB41L1-201ENST00000202028 PDE4AP27815 886 aa11.14□□□□□ -0.63
EPB41L1-201ENST00000202028 A2ML1A8K2U0 1454 aa11.13□□□□□ -0.63
EPB41L1-201ENST00000202028 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
EPB41L1-201ENST00000202028 SLC24A1O60721 1099 aa11.13□□□□□ -0.63
EPB41L1-201ENST00000202028 NEFMP07197 916 aa11.13□□□□□ -0.63
EPB41L1-201ENST00000202028 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
EPB41L1-201ENST00000202028 BRD4O60885 1362 aaPredicted RBP11.13□□□□□ -0.63
EPB41L1-201ENST00000202028 SBNO2Q9Y2G9 1366 aa11.13□□□□□ -0.63
EPB41L1-201ENST00000202028 DIP2AQ14689 1571 aa11.12□□□□□ -0.63
EPB41L1-201ENST00000202028 SCAF11Q99590 1463 aaKnown RBP11.12□□□□□ -0.63
EPB41L1-201ENST00000202028 RIMS1Q86UR5 1692 aaKnown RBP11.12□□□□□ -0.63
EPB41L1-201ENST00000202028 DLC1Q96QB1 1528 aa11.12□□□□□ -0.63
EPB41L1-201ENST00000202028 TMF1P82094 1093 aa11.12□□□□□ -0.63
EPB41L1-201ENST00000202028 ARHGAP23Q9P227 1491 aa11.12□□□□□ -0.63
EPB41L1-201ENST00000202028 KNSTRNQ9Y448 316 aa11.12□□□□□ -0.63
EPB41L1-201ENST00000202028 ZMYM3Q14202 1370 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms